Os01g0738500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0738500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.63 | 0.238 | 10.2 | 1.21 | 0.389 | -0.972 | -0.116 | 1.07 | 0.261 | 18 | 14.9 | 473 | -- | -- |
| 26.31 | 0.239 | 10.2 | 1.03 | 0.4 | -0.973 | 0.142 | -- | 0.213 | 17.8 | 10.23 | 454 | -- | -- |
| 25.66 | 0.236 | 10.2 | 1.2 | 0.391 | -0.976 | -- | 0.989 | 0.256 | 17.9 | 14.8 | 468 | -- | -- |
| 26.33 | 0.239 | 10.2 | 1.04 | 0.389 | -0.964 | -- | -- | 0.211 | 18 | 11.16 | 488 | -- | -- |
| 28.01 | 0.246 | 10.2 | 1.22 | -- | -0.749 | -- | 0.856 | 0.248 | -- | 13.84 | 1258 | -- | -- |
| 36.95 | 0.285 | 10.2 | 0.815 | 0.134 | -- | 0.0371 | -- | 0.0686 | 16.9 | -- | -- | -- | -- |
| 36.95 | 0.285 | 10.2 | 0.815 | 0.135 | -- | -- | -- | 0.0687 | 17 | -- | -- | -- | -- |
| 28.62 | 0.249 | 10.2 | 1.04 | -- | -0.739 | -- | -- | 0.198 | -- | 9.485 | 1239 | -- | -- |
| 51.45 | 0.334 | 10.2 | -- | 0.255 | -0.494 | -- | -- | 0.038 | 17.6 | 11.36 | 413 | -- | -- |
| 37.9 | 0.288 | 10.2 | 0.81 | -- | -- | -- | -- | 0.0653 | -- | -- | -- | -- | -- |
| 54.45 | 0.345 | 10.3 | -- | 0.121 | -- | -- | -- | -0.022 | 17.2 | -- | -- | -- | -- |
| 53.33 | 0.34 | 10.2 | -- | -- | -0.313 | -- | -- | 0.0203 | -- | 5.864 | 1163 | -- | -- |
| 55.21 | 0.347 | 10.3 | -- | -- | -- | -- | -- | -0.0246 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.76 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 2 | 24.91 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 13 | 25.35 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 17 | 25.46 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 23 | 25.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 46 | 25.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 70 | 26.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 119 | 26.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 126 | 26.24 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 135 | 26.29 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 151 | 26.34 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 167 | 26.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 168 | 26.38 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 198 | 26.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 226 | 26.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 249 | 26.59 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 269 | 26.63 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 307 | 26.72 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 334 | 26.78 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 352 | 26.81 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 360 | 26.82 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 21 |
| 382 | 26.87 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 434 | 26.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 23 |
| 438 | 26.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 444 | 26.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 473 | 27.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 496 | 27.02 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 535 | 27.10 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 589 | 27.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 678 | 27.27 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 21 |
| 681 | 27.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 9 |
| 687 | 27.28 | temperature | 20 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 705 | 27.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 775 | 27.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 12 | 3 |
| 864 | 27.48 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |