Os01g0727500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF584 family protein.
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Os01g0727500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF584 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 404.55 | 0.945 | 7.79 | -0.326 | 3.85 | 4.06 | -0.732 | 2.98 | 0.0252 | 1.83 | 27.61 | 7 | 16.7 | -- |
| 409.58 | 0.95 | 7.77 | -0.142 | 3.87 | 3.62 | -1.37 | -- | 0.0473 | 1.72 | 28.03 | 6 | 17.2 | -- |
| 405.22 | 0.945 | 7.8 | -0.375 | 3.84 | 4.07 | -- | 3.69 | 0.0101 | 1.82 | 27.61 | 7 | 16.7 | -- |
| 416.67 | 0.957 | 7.77 | -0.123 | 3.85 | 3.45 | -- | -- | 0.0395 | 1.74 | 27.9 | 5 | 17.1 | -- |
| 501.84 | 1.04 | 7.88 | -0.461 | -- | 5.22 | -- | 1.7 | -0.284 | -- | 41.3 | 635 | 9.7 | -- |
| 502.26 | 1.05 | 7.84 | -0.63 | 3.49 | -- | -0.482 | -- | -0.301 | 2.05 | -- | -- | -- | -- |
| 503.14 | 1.05 | 7.84 | -0.616 | 3.49 | -- | -- | -- | -0.299 | 2.04 | -- | -- | -- | -- |
| 446.95 | 0.985 | 7.77 | 0.014 | -- | 5.22 | -- | -- | -0.0495 | -- | 123.2 | 1230 | 14.3 | -- |
| 417.04 | 0.956 | 7.77 | -- | 3.85 | 3.51 | -- | -- | 0.0581 | 1.74 | 27.9 | 4 | 17.1 | -- |
| 1234.48 | 1.64 | 7.8 | -0.47 | -- | -- | -- | -- | -0.216 | -- | -- | -- | -- | -- |
| 513.13 | 1.06 | 7.82 | -- | 3.48 | -- | -- | -- | -0.23 | 2.04 | -- | -- | -- | -- |
| 444.53 | 0.982 | 7.75 | -- | -- | 5.21 | -- | -- | -0.0153 | -- | 178.6 | 1303 | 14.8 | -- |
| 1240.32 | 1.64 | 7.79 | -- | -- | -- | -- | -- | -0.164 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 404.94 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 19 |
| 5 | 408.49 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 22 |
| 9 | 409.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 20 |
| 26 | 413.83 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 11 |
| 27 | 413.95 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 49 | 418.04 | temperature | 25 | 10 | < th | dose independent | rect. | 10 | 11 |
| 57 | 418.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 72 | 419.27 | temperature | 25 | 10 | < th | dose independent | rect. | 6 | 15 |
| 85 | 420.77 | temperature | 25 | 10 | < th | dose independent | sin | 22 | NA |
| 87 | 421.05 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 22 |
| 96 | 422.28 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 21 |
| 103 | 422.78 | temperature | 25 | 10 | > th | dose independent | sin | 22 | NA |
| 108 | 423.01 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 121 | 423.71 | temperature | 15 | 10 | > th | dose dependent | sin | 23 | NA |
| 133 | 424.29 | temperature | 25 | 90 | < th | dose independent | rect. | 1 | 20 |
| 154 | 424.87 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 14 |
| 155 | 424.97 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 162 | 425.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 171 | 425.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 21 |
| 179 | 425.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 182 | 425.97 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 185 | 425.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 186 | 426.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 201 | 426.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 204 | 426.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 209 | 426.59 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 217 | 426.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 218 | 426.80 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 11 |
| 243 | 427.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 268 | 427.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 273 | 428.05 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 280 | 428.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 286 | 428.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 287 | 428.32 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 12 |
| 288 | 428.33 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 15 |
| 294 | 428.48 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 2 |
| 324 | 429.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 347 | 429.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 348 | 429.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 370 | 430.18 | temperature | 25 | 30 | < th | dose independent | rect. | 5 | 23 |
| 374 | 430.28 | temperature | 25 | 10 | > th | dose independent | rect. | 8 | 12 |
| 379 | 430.37 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 3 |
| 402 | 430.64 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 5 |
| 411 | 430.69 | temperature | 25 | 90 | > th | dose independent | rect. | 19 | 23 |
| 418 | 430.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 425 | 430.92 | temperature | 25 | 90 | > th | dose independent | rect. | 23 | 23 |
| 441 | 431.25 | temperature | 25 | 30 | < th | dose independent | rect. | 3 | 18 |
| 469 | 431.94 | temperature | 25 | 90 | > th | dose independent | no | NA | NA |
| 479 | 432.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 488 | 432.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 508 | 432.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 530 | 432.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 532 | 432.85 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 547 | 433.12 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 552 | 433.16 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 553 | 433.16 | temperature | 25 | 30 | > th | dose independent | rect. | 8 | 10 |
| 562 | 433.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 609 | 433.80 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 633 | 434.05 | temperature | 25 | 30 | > th | dose independent | rect. | 23 | 21 |
| 645 | 434.21 | temperature | 25 | 30 | > th | dose independent | rect. | 23 | 19 |
| 652 | 434.27 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 12 |
| 721 | 434.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 747 | 435.20 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 749 | 435.21 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 779 | 435.48 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 786 | 435.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 787 | 435.52 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 14 |
| 810 | 435.74 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 817 | 435.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 828 | 435.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 863 | 436.08 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 869 | 436.15 | temperature | 25 | 90 | < th | dose independent | rect. | 9 | 23 |
| 920 | 436.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 928 | 436.60 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 941 | 436.67 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 946 | 436.70 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 973 | 436.89 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 993 | 436.97 | temperature | 25 | 1440 | > th | dose independent | sin | 22 | NA |