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Os01g0725800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.9 (0.0172) R2 : 0.868
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.45 (0.0449) R2dC : 0.867 R2C : 0.866
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0881 (0.0363) R2dN8 : 0.00221 R2N8 : 0.00156
σ : 0.325
deviance : 48.29
__
_____
C
peak time of C : 5.08
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.96 0.289 14.9 0.157 2.26 0.79 0.246 -0.339 0.158 6.55 0.14 97 -- --
38.63 0.289 14.9 0.159 2.26 0.802 0.318 -- 0.16 6.59 0.1301 96 -- --
38.11 0.288 14.9 0.16 2.26 0.792 -- -0.36 0.157 6.55 0.1337 96 -- --
38.88 0.29 14.9 0.156 2.26 0.797 -- -- 0.156 6.57 0.14 96 -- --
113.8 0.497 14.9 1.15 -- 1.74 -- -0.222 0.583 -- 1.55 580 -- --
47.95 0.325 14.9 0.0888 2.45 -- 0.226 -- 0.0991 5.09 -- -- -- --
48.08 0.325 14.9 0.0885 2.45 -- -- -- 0.098 5.08 -- -- -- --
54.62 0.344 15 0.735 -- 2.75 -- -- 0.182 -- 0.13 637 -- --
39.51 0.293 14.9 -- 2.26 0.783 -- -- 0.147 6.54 0.1398 96 -- --
363.64 0.891 15 0.176 -- -- -- -- 0.16 -- -- -- -- --
48.29 0.325 14.9 -- 2.45 -- -- -- 0.0881 5.08 -- -- -- --
49.36 0.327 15 -- -- 2.73 -- -- 0.187 -- 1.412 632 -- --
364.46 0.891 15 -- -- -- -- -- 0.141 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.42 radiation 1.0 270 > th dose independent rect. 10 21
4 34.16 radiation 1.0 90 > th dose independent rect. 13 19
5 34.63 radiation 1.0 90 < th dose dependent sin 14 NA
6 34.67 radiation 1.0 90 < th dose independent sin 13 NA
18 35.73 radiation 10.0 30 > th dose independent rect. 8 6
22 35.80 radiation 1.0 90 > th dose independent sin 13 NA
24 35.80 precipitation 0.1 270 < th dose independent rect. 21 10
25 35.80 precipitation 0.1 270 < th dose dependent rect. 21 10
27 35.89 temperature 10.0 270 > th dose independent rect. 8 3
28 35.89 humidity 50.0 270 > th dose independent rect. 8 3
29 35.89 atmosphere 995.0 270 > th dose independent rect. 8 3
30 35.89 atmosphere 1015.0 270 < th dose independent rect. 8 3
31 35.89 precipitation 0.1 270 < th dose independent rect. 8 3
32 35.89 temperature 10.0 270 > th dose independent rect. 11 21
33 35.89 precipitation 0.1 270 < th dose dependent rect. 8 3
34 35.90 wind 9.0 270 < th dose independent rect. 21 10
35 35.90 temperature 10.0 270 > th dose independent rect. 21 10
36 35.90 temperature 30.0 270 < th dose independent rect. 21 10
37 35.90 humidity 50.0 270 > th dose independent rect. 21 10
40 35.90 atmosphere 995.0 270 > th dose independent rect. 21 10
41 35.90 radiation 30.0 270 < th dose independent rect. 21 10
43 35.90 temperature 10.0 270 > th dose independent rect. 7 14
44 35.90 precipitation 0.1 270 < th dose independent rect. 11 21
45 35.90 precipitation 0.1 270 < th dose dependent rect. 11 21
46 35.91 radiation 1.0 270 > th dose independent rect. 8 3
47 35.92 wind 9.0 270 < th dose independent rect. 8 3
49 35.95 wind 1.0 270 > th dose independent rect. 8 3
52 35.99 radiation 1.0 90 < th dose dependent rect. 16 14
53 36.02 wind 9.0 270 < th dose independent rect. 11 21
61 36.14 wind 9.0 270 < th dose independent rect. 7 14
62 36.16 temperature 10.0 270 > th dose dependent rect. 8 3
70 36.29 precipitation 0.1 270 < th dose independent rect. 7 14
72 36.29 precipitation 0.1 270 < th dose independent rect. 12 19
73 36.29 precipitation 0.1 270 < th dose dependent rect. 7 14
74 36.29 precipitation 0.1 270 < th dose dependent rect. 12 19
91 36.38 radiation 40.0 30 < th dose independent rect. 13 19
101 36.44 temperature 10.0 90 > th dose dependent rect. 8 5
114 36.48 temperature 10.0 10 > th dose dependent rect. 8 6
147 36.66 wind 1.0 90 > th dose dependent rect. 13 5
158 36.76 atmosphere 1015.0 270 < th dose independent rect. 7 14
165 36.78 atmosphere 995.0 90 > th dose independent rect. 13 20
166 36.79 wind 1.0 270 > th dose independent rect. 9 1
169 36.80 wind 3.0 90 > th dose independent rect. 13 5
170 36.80 radiation 20.0 10 < th dose dependent rect. 6 12
178 36.84 temperature 10.0 270 > th dose independent rect. 9 1
179 36.84 atmosphere 995.0 270 > th dose independent rect. 9 1
180 36.84 atmosphere 1015.0 270 < th dose independent rect. 9 1
182 36.84 temperature 10.0 270 > th dose independent rect. 10 23
183 36.85 precipitation 0.1 270 < th dose independent rect. 9 1
184 36.85 precipitation 0.1 270 < th dose dependent rect. 9 1
192 36.87 wind 9.0 270 < th dose independent rect. 9 1
193 36.87 humidity 60.0 90 > th dose independent rect. 18 11
198 36.88 humidity 50.0 270 > th dose independent rect. 9 1
200 36.88 humidity 90.0 30 < th dose independent rect. 8 6
202 36.89 radiation 1.0 270 > th dose independent rect. 9 1
204 36.89 temperature 30.0 90 < th dose independent rect. 18 11
206 36.91 atmosphere 995.0 270 > th dose independent rect. 11 21
215 36.93 temperature 10.0 10 > th dose independent rect. 8 6
217 36.93 atmosphere 995.0 10 > th dose independent rect. 8 6
218 36.93 atmosphere 1015.0 10 < th dose independent rect. 8 6
219 36.93 precipitation 0.1 10 < th dose independent rect. 8 6
220 36.93 temperature 10.0 10 > th dose independent rect. 14 18
221 36.93 precipitation 0.1 10 < th dose dependent rect. 8 6
247 36.99 wind 9.0 10 < th dose independent rect. 8 6
253 37.00 temperature 20.0 90 > th dose independent rect. 13 5
254 37.00 radiation 1.0 270 > th dose independent rect. 12 6
257 37.01 wind 9.0 10 < th dose independent rect. 14 18
259 37.01 radiation 40.0 270 < th dose dependent rect. 21 11
268 37.02 radiation 1.0 90 < th dose independent rect. 17 12
274 37.03 humidity 90.0 90 < th dose independent rect. 9 4
308 37.07 atmosphere 1015.0 90 < th dose independent rect. 13 20
348 37.12 atmosphere 995.0 10 > th dose independent rect. 14 18
349 37.13 radiation 1.0 270 > th dose independent rect. 13 4
354 37.14 radiation 1.0 720 < th dose dependent rect. 18 1
366 37.16 radiation 30.0 270 < th dose dependent rect. 16 11
371 37.18 wind 1.0 10 > th dose independent rect. 8 6
372 37.18 temperature 10.0 1440 > th dose independent rect. 9 6
377 37.18 temperature 10.0 1440 > th dose independent rect. 15 18
420 37.27 wind 1.0 270 > th dose independent rect. 12 19
453 37.34 temperature 20.0 270 > th dose independent rect. 13 2
461 37.37 atmosphere 1015.0 270 < th dose independent rect. 11 21
481 37.44 radiation 1.0 720 < th dose independent rect. 18 1
498 37.46 atmosphere 995.0 90 > th dose independent rect. 18 11
500 37.47 temperature 10.0 90 > th dose independent rect. 18 11
502 37.47 radiation 20.0 90 < th dose independent rect. 18 11
505 37.47 temperature 10.0 90 > th dose independent rect. 5 13
506 37.47 atmosphere 1015.0 90 < th dose independent rect. 5 13
511 37.49 wind 9.0 90 < th dose independent rect. 5 13
515 37.51 atmosphere 1015.0 10 < th dose independent rect. 14 18
518 37.52 wind 9.0 90 < th dose independent rect. 18 11
522 37.53 wind 9.0 270 < th dose dependent rect. 8 3
528 37.54 atmosphere 1015.0 270 < th dose independent rect. 22 9
579 37.64 humidity 50.0 270 > th dose independent rect. 13 2
582 37.64 atmosphere 995.0 90 > th dose independent rect. 18 19
583 37.65 temperature 10.0 90 > th dose independent rect. 13 5
585 37.65 atmosphere 1010.0 90 < th dose independent rect. 13 5
588 37.65 temperature 10.0 90 > th dose independent rect. 18 19
589 37.66 radiation 40.0 30 < th dose independent rect. 13 5
605 37.70 atmosphere 995.0 90 > th dose independent rect. 13 5
611 37.70 temperature 10.0 270 > th dose independent rect. 3 14
612 37.70 atmosphere 1015.0 270 < th dose independent rect. 3 14
626 37.73 wind 1.0 270 > th dose dependent rect. 13 2
635 37.76 wind 9.0 90 < th dose independent rect. 13 5
636 37.76 humidity 90.0 270 < th dose independent rect. 12 5
645 37.81 atmosphere 995.0 270 > th dose independent rect. 13 2
653 37.81 temperature 10.0 90 > th dose dependent rect. 13 19
658 37.83 wind 1.0 270 > th dose independent rect. 13 2
659 37.83 precipitation 0.1 270 < th dose independent rect. 12 5
663 37.83 precipitation 0.1 270 < th dose dependent rect. 12 5
667 37.85 wind 9.0 90 < th dose independent rect. 18 19
671 37.86 temperature 10.0 1440 > th dose independent rect. 14 5
676 37.86 temperature 10.0 1440 > th dose independent rect. 19 19
679 37.86 atmosphere 995.0 1440 > th dose independent rect. 19 19
681 37.87 humidity 50.0 10 > th dose independent rect. 14 18
684 37.88 precipitation 0.1 270 < th dose independent rect. 3 14
689 37.88 precipitation 0.1 270 < th dose dependent rect. 3 14
694 37.89 radiation 10.0 10 < th dose independent rect. 6 12
702 37.93 temperature 10.0 270 > th dose independent rect. 13 2
704 37.93 atmosphere 1010.0 270 < th dose independent rect. 13 2
707 37.93 temperature 10.0 270 > th dose independent rect. 15 22
737 37.97 precipitation 0.1 270 < th dose independent rect. 13 2
739 37.97 precipitation 0.1 270 < th dose dependent rect. 13 2
740 37.98 wind 9.0 270 < th dose independent rect. 13 2
745 37.98 atmosphere 995.0 90 > th dose independent rect. 5 13
746 37.98 wind 9.0 270 < th dose independent rect. 3 14
762 38.00 precipitation 0.1 90 < th dose independent rect. 5 13
764 38.00 precipitation 0.1 90 < th dose dependent rect. 5 13
769 38.02 temperature 10.0 10 > th dose dependent rect. 14 18
786 38.04 precipitation 0.1 270 < th dose independent rect. 17 19
787 38.04 radiation 20.0 720 < th dose dependent rect. 17 2
791 38.04 precipitation 0.1 270 < th dose dependent rect. 17 19
797 38.06 humidity 50.0 720 > th dose independent rect. 17 2
800 38.06 humidity 50.0 270 > th dose independent rect. 17 19
814 38.09 temperature 10.0 270 > th dose dependent rect. 12 5
830 38.11 temperature 10.0 270 > th dose dependent rect. 13 2
831 38.11 wind 9.0 270 < th dose dependent rect. 7 5
853 38.14 wind 9.0 270 < th dose independent rect. 15 22
864 38.16 atmosphere 995.0 90 > th dose dependent rect. 13 5
869 38.18 precipitation 0.1 90 < th dose independent rect. 18 11
871 38.18 precipitation 0.1 90 < th dose dependent rect. 18 11
908 38.25 wind 1.0 270 > th dose independent rect. 17 10
914 38.26 atmosphere 995.0 1440 > th dose independent rect. 9 5
928 38.27 atmosphere 995.0 270 > th dose independent rect. 3 14
969 38.30 radiation 1.0 90 < th dose dependent rect. 3 23