Os01g0723100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Senescence-associated family protein.
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Os01g0723100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Senescence-associated family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.03 | 0.367 | 9.22 | -0.0717 | 1.06 | -0.961 | -1.09 | -2.9 | 0.13 | 3.31 | 5.905 | 290 | -- | -- |
| 64.17 | 0.373 | 9.16 | 0.336 | 1.01 | -0.896 | -0.63 | -- | 0.239 | 3.52 | 20.98 | 192 | -- | -- |
| 62.89 | 0.369 | 9.23 | -0.126 | 1.31 | -0.746 | -- | -2.68 | 0.0989 | 3.26 | 7.164 | 749 | -- | -- |
| 64.58 | 0.374 | 9.18 | 0.344 | 1.32 | -0.704 | -- | -- | 0.186 | 3.12 | 24.39 | 839 | -- | -- |
| 106.67 | 0.481 | 9.22 | 0.264 | -- | -1.62 | -- | -1.11 | 0.249 | -- | 21.04 | 159 | -- | -- |
| 75.98 | 0.409 | 9.19 | 0.171 | 1.35 | -- | -0.233 | -- | 0.11 | 3.75 | -- | -- | -- | -- |
| 76.14 | 0.409 | 9.19 | 0.174 | 1.35 | -- | -- | -- | 0.111 | 3.78 | -- | -- | -- | -- |
| 103.82 | 0.475 | 9.13 | 0.571 | -- | -1.69 | -- | -- | 0.405 | -- | 21.64 | 147 | -- | -- |
| 67.56 | 0.383 | 9.19 | -- | 1.29 | -0.645 | -- | -- | 0.142 | 3.13 | 24.5 | 783 | -- | -- |
| 176.94 | 0.622 | 9.19 | 0.23 | -- | -- | -- | -- | 0.147 | -- | -- | -- | -- | -- |
| 76.94 | 0.41 | 9.19 | -- | 1.36 | -- | -- | -- | 0.0914 | 3.78 | -- | -- | -- | -- |
| 109.29 | 0.487 | 9.17 | -- | -- | -1.59 | -- | -- | 0.253 | -- | 24.1 | 162 | -- | -- |
| 178.34 | 0.623 | 9.2 | -- | -- | -- | -- | -- | 0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 2 | 54.63 | temperature | 15 | 270 | > th | dose dependent | rect. | 8 | 18 |
| 45 | 57.70 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 53 | 57.98 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 125 | 59.84 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 141 | 60.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 5 |
| 211 | 60.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 216 | 60.90 | temperature | 15 | 90 | > th | dose dependent | sin | 20 | NA |
| 223 | 60.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 235 | 61.04 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 276 | 61.26 | radiation | 1 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 291 | 61.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 300 | 61.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 303 | 61.37 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 377 | 61.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 22 |
| 378 | 61.58 | temperature | 30 | 270 | < th | dose independent | rect. | 2 | 19 |
| 415 | 61.64 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 17 |
| 428 | 61.66 | radiation | 1 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 505 | 61.84 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 15 |
| 512 | 61.85 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 4 |
| 523 | 61.85 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 545 | 61.91 | radiation | 1 | 720 | > th | dose independent | sin | 14 | NA |
| 547 | 61.92 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 23 |
| 548 | 61.93 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 564 | 61.96 | temperature | 25 | 270 | > th | dose independent | rect. | 9 | 17 |
| 644 | 62.12 | temperature | 30 | 30 | < th | dose dependent | rect. | 18 | 15 |
| 686 | 62.21 | radiation | 20 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 764 | 62.33 | radiation | 20 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 919 | 62.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 975 | 62.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 17 |
| 983 | 62.64 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 14 |