Os01g0721800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0721800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 242.84 | 0.732 | 3.19 | 0.495 | 0.17 | -1.06 | -0.0501 | -2.09 | -0.357 | 15.7 | 3.185 | 2607 | -- | -- |
| 247.1 | 0.732 | 3.15 | 0.455 | 0.179 | -0.981 | -0.115 | -- | -0.346 | 15.7 | 3.053 | 2601 | -- | -- |
| 242.82 | 0.726 | 3.19 | 0.491 | 0.163 | -1.05 | -- | -2.09 | -0.359 | 15.7 | 3.098 | 2618 | -- | -- |
| 247.12 | 0.732 | 3.15 | 0.444 | 0.178 | -0.971 | -- | -- | -0.345 | 15.4 | 3.069 | 2601 | -- | -- |
| 244.23 | 0.728 | 3.19 | 0.483 | -- | -1.03 | -- | -2.08 | -0.366 | -- | 2.877 | 2618 | -- | -- |
| 256.86 | 0.751 | 3.1 | 0.23 | 0.19 | -- | -0.013 | -- | -0.115 | 16.7 | -- | -- | -- | -- |
| 256.86 | 0.751 | 3.1 | 0.23 | 0.19 | -- | -- | -- | -0.115 | 16.7 | -- | -- | -- | -- |
| 248.77 | 0.735 | 3.15 | 0.439 | -- | -0.96 | -- | -- | -0.358 | -- | 2.8 | 2618 | -- | -- |
| 251.75 | 0.739 | 3.14 | -- | 0.168 | -0.744 | -- | -- | -0.338 | 15.5 | 3.011 | 2601 | -- | -- |
| 258.77 | 0.752 | 3.09 | 0.223 | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
| 258.25 | 0.752 | 3.1 | -- | 0.185 | -- | -- | -- | -0.141 | 16.8 | -- | -- | -- | -- |
| 253.23 | 0.741 | 3.15 | -- | -- | -0.746 | -- | -- | -0.347 | -- | 2.8 | 2618 | -- | -- |
| 260.08 | 0.753 | 3.1 | -- | -- | -- | -- | -- | -0.145 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.96 | wind | 3.0 | 1440 | < th | dose independent | rect. | 23 | 3 |
| 3 | 240.24 | wind | 3.0 | 1440 | > th | dose independent | rect. | 23 | 3 |
| 5 | 240.28 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 6 | 240.29 | wind | 3.0 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 7 | 240.31 | wind | 3.0 | 1440 | > th | dose independent | rect. | 22 | 6 |
| 14 | 240.56 | wind | 5.0 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 15 | 240.57 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 16 | 240.57 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 22 | 7 |
| 33 | 240.94 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 22 | 7 |
| 57 | 241.28 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 76 | 241.67 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 78 | 241.69 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 84 | 241.78 | wind | 7.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 110 | 242.34 | wind | 3.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 112 | 242.36 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 113 | 242.36 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 118 | 242.45 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 120 | 242.45 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 132 | 242.59 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 155 | 242.81 | wind | 3.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 309 | 243.94 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 322 | 243.99 | wind | 1.0 | 1440 | > th | dose dependent | sin | 10 | NA |
| 330 | 244.02 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 352 | 244.09 | wind | 7.0 | 1440 | < th | dose dependent | sin | 10 | NA |
| 396 | 244.26 | temperature | 25.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 404 | 244.29 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 448 | 244.45 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 18 | 7 |
| 457 | 244.47 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 481 | 244.54 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 18 | 7 |
| 482 | 244.54 | wind | 3.0 | 90 | > th | dose dependent | rect. | 1 | 9 |
| 484 | 244.55 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 552 | 244.69 | wind | 3.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 584 | 244.79 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 614 | 244.90 | wind | 3.0 | 90 | > th | dose dependent | rect. | 23 | 11 |
| 632 | 244.95 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 21 | 14 |
| 698 | 245.12 | humidity | 80.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 702 | 245.14 | wind | 3.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 723 | 245.19 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 14 |
| 736 | 245.23 | wind | 3.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 770 | 245.30 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 833 | 245.46 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 857 | 245.52 | humidity | 80.0 | 10 | > th | dose independent | rect. | 8 | 3 |
| 868 | 245.55 | humidity | 80.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 870 | 245.55 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 2 | 2 |
| 878 | 245.57 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 889 | 245.59 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 11 |
| 910 | 245.64 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 920 | 245.66 | wind | 9.0 | 30 | > th | dose independent | rect. | 10 | 2 |
| 992 | 245.76 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 2 | 7 |
| 1000 | 245.77 | wind | 3.0 | 90 | > th | dose dependent | rect. | 8 | 1 |