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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0713800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Dilute domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.9 (0.0289) R2 : 0.0178
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.175 (0.0608) R2dN8 : 0.023 R2N8 : 0.0178
σ : 0.544
deviance : 135.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
123.37 0.522 2.93 -0.0564 0.0615 -0.644 0.317 2.86 0.157 15.8 1.1 16 -- --
130.03 0.531 2.9 0.0486 0.0291 -0.438 0.637 -- 0.187 15.5 1 16 -- --
123.58 0.518 2.94 -0.0617 0.0834 -0.662 -- 3.06 0.156 17.3 1.1 16 -- --
131.22 0.534 2.9 0.0647 0.0424 -0.427 -- -- 0.19 17.8 1.066 16 -- --
123.83 0.518 2.93 -0.0522 -- -0.608 -- 2.94 0.156 -- 1.1 16 -- --
134.12 0.543 2.9 0.104 0.0812 -- -0.546 -- 0.183 3.01 -- -- -- --
135.11 0.544 2.9 0.115 0.0806 -- -- -- 0.186 3.48 -- -- -- --
131.3 0.534 2.9 0.0656 -- -0.403 -- -- 0.189 -- 1.059 16 -- --
131.32 0.534 2.9 -- 0.0428 -0.433 -- -- 0.183 18 1.055 16 -- --
135.48 0.544 2.9 0.119 -- -- -- -- 0.188 -- -- -- -- --
135.46 0.544 2.9 -- 0.0829 -- -- -- 0.173 3.48 -- -- -- --
131.41 0.534 2.9 -- -- -0.412 -- -- 0.182 -- 1.051 16 -- --
135.85 0.544 2.9 -- -- -- -- -- 0.175 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 107.67 radiation 1.0 14400 < th dose dependent rect. 3 1
10 108.24 wind 9.0 1440 < th dose independent rect. 3 1
11 108.24 temperature 10.0 1440 > th dose independent rect. 3 1
14 108.24 temperature 30.0 1440 < th dose independent rect. 3 1
18 108.24 humidity 50.0 1440 > th dose independent rect. 3 1
27 108.24 atmosphere 995.0 1440 > th dose independent rect. 3 1
28 108.24 radiation 1.0 1440 < th dose independent rect. 3 1
48 108.24 temperature 10.0 1440 > th dose independent rect. 4 23
51 108.24 radiation 1.0 1440 < th dose dependent rect. 3 1
60 108.30 temperature 20.0 30 > th dose dependent rect. 2 1
61 108.32 atmosphere 1005.0 30 > th dose dependent rect. 2 1
64 108.38 wind 3.0 30 < th dose dependent rect. 2 1
65 108.39 temperature 20.0 30 > th dose independent rect. 2 1
67 108.40 atmosphere 1005.0 30 > th dose independent rect. 2 1
70 108.42 wind 3.0 30 < th dose independent rect. 2 1
76 108.48 humidity 80.0 30 > th dose independent rect. 2 1
78 108.49 humidity 50.0 30 > th dose dependent rect. 2 1
81 108.50 temperature 10.0 30 > th dose independent rect. 2 1
83 108.50 temperature 30.0 30 < th dose independent rect. 2 1
84 108.50 humidity 50.0 30 > th dose independent rect. 2 1
88 108.50 atmosphere 1010.0 30 < th dose independent rect. 2 1
90 108.50 radiation 1.0 30 < th dose independent rect. 2 1
95 108.50 precipitation 0.1 30 < th dose independent rect. 2 1
96 108.50 temperature 10.0 30 > th dose independent rect. 3 23
98 108.50 radiation 1.0 30 < th dose dependent rect. 2 1
103 108.50 precipitation 0.1 30 < th dose dependent rect. 2 1
112 108.69 atmosphere 1015.0 30 < th dose dependent rect. 2 1
113 108.72 atmosphere 995.0 30 > th dose independent rect. 3 23
117 108.89 temperature 30.0 30 < th dose dependent rect. 2 1
124 109.12 wind 1.0 30 > th dose independent rect. 2 1
134 109.35 precipitation 0.1 30 < th dose independent rect. 3 23
135 109.35 precipitation 0.1 30 < th dose dependent rect. 3 23
177 111.08 wind 9.0 30 < th dose independent rect. 3 23
189 115.03 humidity 50.0 30 > th dose independent rect. 3 23
223 119.71 temperature 30.0 30 < th dose independent rect. 3 23
249 120.07 atmosphere 1015.0 30 < th dose independent rect. 3 23
266 121.33 wind 1.0 10 < th dose independent rect. 9 18
294 122.18 wind 1.0 30 > th dose independent rect. 3 23
295 122.22 temperature 25.0 270 > th dose independent rect. 23 4
308 122.79 humidity 90.0 90 < th dose independent rect. 2 1
312 122.95 temperature 25.0 270 > th dose dependent rect. 23 4
324 123.25 temperature 25.0 270 > th dose dependent rect. 23 7
346 123.81 wind 9.0 30 < th dose dependent rect. 3 23
351 123.98 wind 1.0 10 > th dose independent sin 16 NA
424 124.62 wind 1.0 10 > th dose independent sin 9 NA
447 124.87 wind 1.0 10 < th dose independent rect. 2 10
452 124.97 wind 1.0 10 > th dose independent no NA NA
453 124.97 wind 1.0 10 < th dose independent rect. 2 8
459 125.04 wind 1.0 10 > th dose independent rect. 21 23
465 125.16 temperature 10.0 30 > th dose dependent rect. 3 23
501 125.83 radiation 20.0 10 < th dose dependent rect. 3 23
514 126.09 wind 1.0 30 < th dose dependent rect. 9 18
521 126.13 wind 1.0 30 > th dose dependent rect. 2 1
525 126.15 radiation 20.0 1440 < th dose dependent rect. 21 1
528 126.16 temperature 10.0 1440 > th dose independent rect. 21 1
531 126.16 temperature 30.0 1440 < th dose independent rect. 21 1
535 126.16 humidity 50.0 1440 > th dose independent rect. 21 1
541 126.16 atmosphere 995.0 1440 > th dose independent rect. 21 1
542 126.16 radiation 1.0 1440 < th dose independent rect. 21 1
562 126.16 temperature 10.0 1440 > th dose independent rect. 22 23
578 126.28 temperature 25.0 30 > th dose independent rect. 20 1
579 126.28 radiation 40.0 14400 < th dose dependent rect. 21 1
587 126.34 atmosphere 1015.0 1440 < th dose independent rect. 3 1
597 126.39 atmosphere 1005.0 30 > th dose dependent rect. 20 1
609 126.43 temperature 20.0 30 > th dose dependent rect. 20 1
613 126.49 wind 3.0 30 > th dose independent rect. 20 1
620 126.53 humidity 90.0 30 < th dose independent rect. 20 1
625 126.56 humidity 80.0 30 > th dose independent rect. 20 1
631 126.60 wind 1.0 10 > th dose independent rect. 23 23
633 126.62 atmosphere 1005.0 30 > th dose independent rect. 20 1
641 126.69 wind 5.0 30 < th dose independent rect. 20 1
646 126.70 wind 1.0 30 > th dose dependent rect. 20 1
653 126.74 temperature 10.0 30 > th dose independent rect. 20 1
655 126.74 temperature 30.0 30 < th dose independent rect. 20 1
656 126.74 humidity 50.0 30 > th dose independent rect. 20 1
660 126.74 atmosphere 1010.0 30 < th dose independent rect. 20 1
662 126.74 radiation 1.0 30 < th dose independent rect. 20 1
667 126.74 precipitation 0.1 30 < th dose independent rect. 20 1
668 126.74 temperature 10.0 30 > th dose independent rect. 21 23
669 126.74 radiation 1.0 30 < th dose dependent rect. 20 1
674 126.74 precipitation 0.1 30 < th dose dependent rect. 20 1
686 126.79 humidity 50.0 30 > th dose dependent rect. 20 1
693 126.84 wind 9.0 30 < th dose dependent rect. 20 1
697 126.90 wind 1.0 10 < th dose independent sin 17 NA
750 127.07 humidity 90.0 30 < th dose dependent rect. 20 1
768 127.19 radiation 10.0 10 < th dose independent rect. 3 23
774 127.26 atmosphere 1015.0 30 < th dose dependent rect. 20 1
791 127.34 wind 1.0 10 > th dose independent rect. 12 23
793 127.35 wind 9.0 30 < th dose independent rect. 21 23
795 127.37 temperature 25.0 1440 < th dose independent rect. 1 1
860 127.61 wind 1.0 10 > th dose independent rect. 23 10
862 127.63 wind 9.0 720 < th dose independent rect. 3 8
864 127.64 wind 1.0 10 > th dose independent rect. 21 12
870 127.66 humidity 50.0 30 > th dose dependent rect. 3 23
904 127.74 atmosphere 995.0 720 > th dose independent rect. 3 12
907 127.75 radiation 40.0 30 < th dose independent rect. 3 23
914 127.78 wind 3.0 720 > th dose dependent rect. 5 1
915 127.78 temperature 30.0 30 < th dose dependent rect. 20 1
918 127.80 wind 5.0 720 > th dose independent rect. 4 1
922 127.80 wind 7.0 90 > th dose dependent rect. 10 1
932 127.83 precipitation 0.1 1440 < th dose independent rect. 15 1
934 127.83 precipitation 0.1 1440 < th dose dependent rect. 15 1
939 127.86 wind 1.0 10 > th dose independent rect. 12 21
945 127.89 wind 9.0 720 < th dose independent rect. 15 12
951 127.91 wind 7.0 90 > th dose independent rect. 10 1
953 127.91 temperature 10.0 720 > th dose independent rect. 3 12
954 127.91 temperature 10.0 720 > th dose independent rect. 15 12
958 127.92 wind 5.0 10 > th dose dependent rect. 11 1
963 127.95 wind 9.0 720 < th dose independent rect. 3 12
975 127.96 atmosphere 1015.0 720 < th dose independent rect. 3 12
981 127.98 precipitation 0.1 720 < th dose independent rect. 3 12
982 127.98 precipitation 0.1 720 < th dose dependent rect. 3 12
983 127.99 atmosphere 995.0 720 > th dose independent rect. 23 16
986 128.00 wind 1.0 10 > th dose independent rect. 16 17
988 128.01 precipitation 0.1 1440 > th dose independent rect. 15 1
991 128.01 precipitation 0.1 1440 > th dose dependent rect. 15 1