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Os01g0704700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Chloride channel protein CLC-f (AtCLC-f). Splice isoform 2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0178) R2 : 0.511
β1 : -1.41 (0.0652) R2dD : 0.52 R2D : 0.439
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.268 (0.038) R2dN8 : 0.0714 R2N8 : -0.00926
σ : 0.334
deviance : 51.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.41 0.28 11.8 -1.27 0.435 0.417 -0.0783 -1.74 -0.355 3.18 1.006 1453 -- --
37.45 0.285 11.8 -1.3 0.384 0.354 0.000111 -- -0.333 2.85 3.1 20007 -- --
35.43 0.277 11.8 -1.27 0.435 0.418 -- -1.73 -0.356 3.19 1 1453 -- --
36.65 0.282 11.8 -1.22 0.418 0.523 -- -- -0.288 2.79 3.5 20139 -- --
45.58 0.314 11.8 -1.28 -- 0.422 -- -1.68 -0.336 -- 1.1 1262 -- --
40.84 0.3 11.8 -1.43 0.421 -- -0.104 -- -0.279 2.81 -- -- -- --
40.88 0.299 11.8 -1.43 0.422 -- -- -- -0.279 2.86 -- -- -- --
45.19 0.313 11.8 -1.01 -- 0.717 -- -- -0.18 -- 3.8 29824 -- --
43.69 0.308 11.7 -- 0.446 1.51 -- -- 0.0636 2.91 5.002 36962 -- --
51.15 0.334 11.8 -1.41 -- -- -- -- -0.268 -- -- -- -- --
94.57 0.455 11.8 -- 0.394 -- -- -- -0.12 2.83 -- -- -- --
53.07 0.339 11.7 -- -- 1.47 -- -- 0.0735 -- 5.098 36997 -- --
103.54 0.475 11.8 -- -- -- -- -- -0.111 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 33.49 radiation 20 1440 < th dose independent rect. 12 1
2 33.59 temperature 20 4320 > th dose independent rect. 17 2
4 33.76 temperature 20 4320 < th dose independent rect. 18 1
13 33.91 radiation 1 1440 < th dose independent rect. 11 1
15 33.91 radiation 1 1440 < th dose dependent rect. 11 1
20 34.00 wind 3 43200 < th dose dependent rect. 7 2
29 34.09 radiation 10 4320 > th dose dependent rect. 17 1
45 34.14 radiation 20 1440 < th dose dependent rect. 12 1
48 34.17 humidity 60 43200 < th dose dependent rect. 2 6
51 34.20 humidity 60 43200 < th dose dependent rect. 23 9
55 34.23 temperature 20 4320 > th dose independent rect. 11 10
64 34.30 wind 1 1440 > th dose independent rect. 23 2
73 34.35 wind 1 1440 > th dose independent rect. 23 16
89 34.47 wind 3 4320 > th dose independent rect. 8 1
90 34.47 wind 1 43200 < th dose dependent rect. 5 21
98 34.53 temperature 20 4320 < th dose independent rect. 11 10
106 34.58 wind 3 4320 < th dose independent rect. 8 1
119 34.67 radiation 10 1440 > th dose independent rect. 12 1
121 34.67 wind 1 1440 < th dose independent rect. 23 16
129 34.71 wind 1 1440 > th dose independent rect. 23 19
132 34.74 radiation 20 4320 < th dose independent rect. 17 1
136 34.75 temperature 20 4320 < th dose dependent rect. 18 1
147 34.80 wind 3 43200 > th dose independent rect. 6 1
157 34.83 wind 3 43200 < th dose independent rect. 6 1
158 34.83 humidity 70 43200 < th dose independent rect. 24 7
166 34.86 wind 1 1440 > th dose independent sin 5 NA
178 34.90 humidity 70 43200 > th dose independent rect. 24 7
181 34.91 radiation 20 4320 < th dose independent rect. 17 5
183 34.92 wind 1 43200 > th dose independent rect. 8 1
188 34.93 wind 5 14400 > th dose dependent rect. 9 1
189 34.95 temperature 20 4320 > th dose independent sin 20 NA
204 34.96 wind 5 14400 > th dose dependent rect. 6 1
212 34.97 wind 7 14400 > th dose dependent rect. 20 15
217 34.98 wind 9 14400 < th dose independent rect. 19 16
220 34.99 wind 3 43200 < th dose independent rect. 6 4
222 34.99 radiation 20 4320 < th dose independent rect. 17 11
225 35.00 radiation 20 4320 < th dose independent rect. 17 9
228 35.00 wind 1 1440 < th dose independent rect. 23 19
229 35.01 wind 1 1440 > th dose independent rect. 3 23
232 35.03 wind 1 1440 < th dose independent sin 5 NA
234 35.03 humidity 90 14400 > th dose independent rect. 9 4
236 35.03 humidity 60 43200 < th dose independent rect. 22 10
240 35.03 wind 5 14400 > th dose dependent rect. 5 5
242 35.04 wind 3 43200 > th dose independent rect. 6 4
247 35.04 wind 5 4320 < th dose dependent rect. 8 1
248 35.04 radiation 20 1440 < th dose dependent rect. 11 4
260 35.06 humidity 90 14400 < th dose independent rect. 10 1
263 35.06 wind 9 14400 > th dose independent rect. 19 16
267 35.06 wind 1 1440 > th dose independent rect. 17 22
275 35.08 temperature 20 4320 < th dose independent sin 20 NA
345 35.15 humidity 50 43200 < th dose dependent rect. 8 1
352 35.16 humidity 50 43200 < th dose independent rect. 4 4
354 35.16 humidity 90 14400 > th dose independent rect. 9 8
365 35.17 humidity 50 43200 > th dose independent rect. 1 7
375 35.17 humidity 90 14400 > th dose dependent rect. 13 1
376 35.17 humidity 80 43200 < th dose dependent rect. 24 1
388 35.19 humidity 90 14400 > th dose independent rect. 10 1
401 35.19 humidity 50 43200 < th dose dependent rect. 19 14
418 35.20 humidity 90 14400 > th dose dependent rect. 12 5
423 35.21 humidity 50 43200 > th dose independent rect. 5 3
444 35.22 humidity 90 14400 > th dose independent rect. 16 1
466 35.23 wind 1 1440 > th dose independent rect. 16 18
516 35.26 humidity 90 14400 > th dose dependent rect. 9 5
523 35.27 humidity 90 14400 < th dose independent rect. 16 2
525 35.27 humidity 90 14400 < th dose independent rect. 9 5
557 35.28 wind 1 1440 > th dose independent rect. 13 21
558 35.28 wind 1 1440 > th dose independent rect. 13 23
568 35.29 wind 1 1440 < th dose independent rect. 19 20
570 35.29 wind 1 4320 > th dose dependent rect. 8 1
593 35.30 wind 1 1440 < th dose independent rect. 17 22
594 35.30 wind 7 14400 > th dose dependent sin 8 NA
604 35.31 humidity 90 14400 < th dose independent rect. 9 9
608 35.31 wind 1 1440 > th dose independent rect. 3 12
616 35.31 wind 1 1440 < th dose independent rect. 3 23
625 35.32 wind 1 43200 < th dose independent rect. 24 2
642 35.32 temperature 20 14400 < th dose dependent rect. 21 1
644 35.32 wind 1 14400 > th dose dependent rect. 3 9
667 35.33 wind 1 1440 > th dose independent rect. 11 22
676 35.33 wind 9 14400 < th dose dependent rect. 3 9
678 35.34 temperature 20 1440 > th dose independent rect. 6 1
681 35.34 wind 9 14400 > th dose independent rect. 23 5
722 35.35 wind 9 14400 > th dose dependent rect. 22 3
761 35.37 wind 9 14400 < th dose independent rect. 22 13
771 35.37 radiation 10 1440 < th dose dependent rect. 9 6
779 35.38 humidity 80 43200 > th dose independent rect. 1 1
780 35.38 humidity 80 43200 < th dose independent rect. 1 1
806 35.39 wind 7 14400 > th dose independent sin 8 NA
852 35.40 wind 1 43200 > th dose independent rect. 3 23
864 35.40 wind 1 14400 > th dose dependent rect. 1 11
876 35.41 wind 3 43200 < th dose independent rect. 6 9
885 35.41 radiation 10 1440 < th dose dependent rect. 14 1
888 35.41 humidity 80 43200 < th dose dependent rect. 21 6
896 35.42 wind 1 1440 > th dose independent no NA NA
906 35.42 humidity 90 14400 < th dose independent rect. 13 6
926 35.42 wind 9 14400 < th dose dependent rect. 1 11
931 35.43 wind 7 14400 < th dose independent sin 8 NA
968 35.44 wind 9 14400 > th dose independent rect. 23 3
973 35.44 wind 9 14400 < th dose independent rect. 22 6
984 35.44 humidity 90 14400 > th dose independent rect. 4 14
985 35.44 humidity 90 14400 > th dose independent rect. 2 16
991 35.44 humidity 90 14400 > th dose dependent rect. 16 2