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Os01g0704300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0425) R2 : 0.684
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.55 (0.116) R2dC : 0.719 R2C : 0.5
β3 : 2.3 (0.162) R2dE : 0.158 R2E : -0.0392
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.365 (0.0901) R2dN8 : 0.0145 R2N8 : 0.0166
σ : 0.796
deviance : 291.77
__
_____
C
peak time of C : 17.1
E
wheather : temperature
threshold : 16.85
memory length : 268
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 5.18
open length of G : 3.03

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
266.47 0.767 10.7 0.23 3.55 2.33 2.48 -2.04 0.351 17.1 17.32 273 5.15 2.95
269.03 0.764 10.7 0.32 3.54 2.3 2.79 -- 0.368 17.1 17.01 263 5.19 3.02
280.85 0.781 10.7 0.191 3.55 2.39 -- -3.19 0.366 17.1 17.56 271 5.23 2.85
288.89 0.792 10.7 0.328 3.55 2.31 -- -- 0.383 17.1 16.82 262 5.21 3.04
340.69 0.86 10.6 0.286 -- 2.99 -- 1.07 0.366 -- -9.847 1017 5.4 3.11
354.37 0.883 10.6 0.382 3.12 -- 2.51 -- 0.572 16.1 -- -- -- --
371.92 0.903 10.6 0.41 3.13 -- -- -- 0.586 16 -- -- -- --
337.78 0.856 10.6 0.0609 -- 3.15 -- -- 0.284 -- 4.732 971 5.55 3.55
291.77 0.796 10.7 -- 3.55 2.3 -- -- 0.365 17.1 16.85 268 5.18 3.03
904.41 1.41 10.6 0.283 -- -- -- -- 0.503 -- -- -- -- --
376.35 0.907 10.6 -- 3.12 -- -- -- 0.541 16 -- -- -- --
337.62 0.856 10.6 -- -- 3.17 -- -- 0.275 -- 4.35 973 5.48 3.66
906.52 1.41 10.6 -- -- -- -- -- 0.471 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 263.48 humidity 60.0 14400 > th dose independent rect. 3 4
2 268.37 radiation 20.0 14400 < th dose independent rect. 3 3
3 269.00 temperature 15.0 270 > th dose dependent rect. 5 3
4 271.59 temperature 15.0 270 > th dose dependent rect. 6 1
5 272.34 temperature 20.0 270 > th dose independent rect. 5 3
7 273.82 temperature 15.0 270 > th dose dependent rect. 4 5
8 274.26 temperature 20.0 270 > th dose independent rect. 6 1
15 277.78 humidity 60.0 14400 > th dose independent rect. 1 6
20 279.26 wind 5.0 10 < th dose independent rect. 20 10
22 279.82 wind 9.0 10 < th dose dependent rect. 20 10
27 280.03 wind 3.0 10 < th dose dependent rect. 2 4
28 280.13 temperature 15.0 10 > th dose dependent rect. 6 5
29 280.37 atmosphere 995.0 10 > th dose dependent rect. 11 19
39 281.13 temperature 20.0 720 > th dose independent rect. 21 12
46 282.13 radiation 40.0 10 < th dose independent rect. 6 5
47 282.30 radiation 40.0 10 < th dose dependent rect. 6 20
48 282.34 radiation 1.0 270 > th dose independent rect. 6 1
49 282.35 precipitation 0.1 10 < th dose independent rect. 20 10
51 282.35 precipitation 0.1 10 < th dose dependent rect. 20 10
55 282.72 temperature 20.0 10 > th dose independent rect. 6 14
56 282.73 radiation 40.0 10 < th dose dependent rect. 6 5
62 283.02 temperature 20.0 10 > th dose independent rect. 6 5
63 283.06 wind 9.0 10 < th dose independent rect. 6 14
72 283.38 precipitation 0.1 10 < th dose independent rect. 11 19
73 283.38 precipitation 0.1 10 < th dose dependent rect. 11 19
74 283.40 temperature 20.0 30 > th dose independent rect. 6 20
77 283.46 wind 7.0 720 < th dose independent rect. 17 4
78 283.49 wind 3.0 270 < th dose independent rect. 6 1
85 284.13 humidity 80.0 270 > th dose independent rect. 6 1
89 284.28 wind 3.0 90 < th dose dependent rect. 3 2
92 284.37 precipitation 0.1 10 < th dose independent rect. 6 14
93 284.37 precipitation 0.1 10 < th dose dependent rect. 6 14
97 284.77 radiation 20.0 270 < th dose independent rect. 6 1
103 285.00 temperature 20.0 720 > th dose independent rect. 21 5
105 285.06 temperature 10.0 10 > th dose dependent rect. 6 14
106 285.18 humidity 60.0 30 > th dose independent rect. 6 5
112 285.23 precipitation 0.1 10 < th dose independent rect. 2 4
113 285.23 precipitation 0.1 10 < th dose dependent rect. 2 4
114 285.28 temperature 10.0 10 > th dose independent rect. 20 10
115 285.28 temperature 30.0 10 < th dose independent rect. 20 10
116 285.28 humidity 50.0 10 > th dose independent rect. 20 10
119 285.28 atmosphere 995.0 10 > th dose independent rect. 20 10
120 285.28 radiation 20.0 10 < th dose independent rect. 20 10
123 285.28 temperature 10.0 10 > th dose independent rect. 6 14
125 285.28 atmosphere 1015.0 10 < th dose independent rect. 6 14
135 285.86 atmosphere 1015.0 1440 < th dose independent rect. 3 4
137 285.93 temperature 10.0 10 > th dose independent rect. 6 5
140 285.93 atmosphere 995.0 10 > th dose independent rect. 6 5
141 285.93 atmosphere 1015.0 10 < th dose independent rect. 6 5
142 285.93 temperature 10.0 10 > th dose independent rect. 11 19
145 286.12 wind 9.0 10 < th dose independent rect. 6 5
146 286.14 precipitation 0.1 10 < th dose independent rect. 6 5
147 286.14 precipitation 0.1 10 < th dose dependent rect. 6 5
163 286.59 humidity 70.0 90 > th dose independent rect. 6 3
167 286.66 wind 9.0 270 < th dose dependent rect. 6 1
174 286.73 temperature 10.0 30 > th dose dependent rect. 6 20
177 286.81 radiation 20.0 14400 < th dose independent rect. 1 5
183 286.95 temperature 10.0 1440 > th dose independent rect. 7 5
186 286.95 atmosphere 995.0 1440 > th dose independent rect. 7 5
187 286.95 temperature 10.0 1440 > th dose independent rect. 12 19
192 287.05 radiation 40.0 90 < th dose independent rect. 6 3
212 287.35 humidity 50.0 30 > th dose dependent rect. 6 5
215 287.48 wind 9.0 30 < th dose dependent rect. 6 5
222 287.61 wind 1.0 10 > th dose independent rect. 6 5
223 287.63 atmosphere 995.0 10 > th dose independent rect. 11 19
225 287.72 precipitation 0.1 270 < th dose independent rect. 7 23
226 287.72 precipitation 0.1 270 < th dose dependent rect. 7 23
235 287.96 wind 1.0 90 > th dose independent rect. 6 3
238 288.02 precipitation 0.1 90 < th dose independent rect. 9 21
239 288.02 precipitation 0.1 90 < th dose dependent rect. 9 21
248 288.33 precipitation 0.1 270 < th dose independent rect. 6 1
249 288.33 precipitation 0.1 270 < th dose dependent rect. 6 1
250 288.36 temperature 10.0 1440 > th dose independent rect. 21 10
253 288.36 temperature 30.0 1440 < th dose independent rect. 21 10
257 288.36 humidity 50.0 1440 > th dose independent rect. 21 10
262 288.36 atmosphere 995.0 1440 > th dose independent rect. 21 10
263 288.36 radiation 40.0 1440 < th dose independent rect. 21 10
267 288.36 temperature 10.0 1440 > th dose independent rect. 7 14
273 288.40 wind 7.0 90 < th dose independent rect. 6 3
277 288.42 temperature 10.0 270 > th dose independent rect. 6 1
279 288.42 temperature 30.0 270 < th dose independent rect. 6 1
280 288.42 humidity 50.0 270 > th dose independent rect. 6 1
282 288.42 atmosphere 995.0 270 > th dose independent rect. 6 1
283 288.42 atmosphere 1015.0 270 < th dose independent rect. 6 1
285 288.42 temperature 10.0 270 > th dose independent rect. 7 23
290 288.56 temperature 10.0 90 > th dose independent rect. 6 3
293 288.56 atmosphere 995.0 90 > th dose independent rect. 6 3
294 288.56 atmosphere 1015.0 90 < th dose independent rect. 6 3
295 288.56 temperature 10.0 90 > th dose independent rect. 9 21
297 288.64 precipitation 0.1 90 < th dose independent rect. 6 3
298 288.64 precipitation 0.1 90 < th dose dependent rect. 6 3
299 288.65 humidity 70.0 720 > th dose independent rect. 19 7
300 288.76 wind 9.0 10 < th dose independent rect. 11 19
301 288.78 precipitation 0.1 720 < th dose independent rect. 17 4
302 288.78 precipitation 0.1 720 < th dose dependent rect. 17 4
310 289.03 radiation 1.0 10 > th dose independent rect. 6 5
318 289.27 temperature 20.0 10 > th dose independent rect. 6 22
324 289.48 wind 5.0 10 < th dose independent rect. 2 4
329 289.60 humidity 50.0 270 > th dose dependent rect. 6 1
334 289.65 humidity 90.0 10 < th dose independent rect. 6 5
337 289.75 temperature 10.0 10 > th dose dependent rect. 2 4
358 290.16 temperature 20.0 720 > th dose independent sin 9 NA
359 290.17 wind 1.0 270 > th dose independent rect. 4 4
366 290.26 temperature 30.0 90 < th dose independent rect. 6 3
368 290.32 radiation 40.0 10 < th dose dependent rect. 20 10
372 290.38 atmosphere 995.0 10 > th dose dependent rect. 6 5
375 290.46 wind 7.0 4320 > th dose independent rect. 15 1
380 290.53 temperature 30.0 10 < th dose independent rect. 6 5
384 290.59 humidity 70.0 720 > th dose independent rect. 19 14
387 290.67 wind 1.0 10 > th dose independent rect. 6 14
389 290.68 radiation 10.0 10 < th dose independent rect. 2 4
404 291.02 wind 7.0 4320 < th dose independent rect. 15 1
410 291.15 wind 9.0 30 < th dose dependent rect. 11 19
411 291.17 wind 1.0 720 > th dose independent rect. 17 4
413 291.19 atmosphere 1005.0 30 > th dose independent rect. 20 10
414 291.21 precipitation 0.1 270 < th dose independent rect. 24 13
415 291.21 precipitation 0.1 270 < th dose dependent rect. 24 13
418 291.25 wind 9.0 90 < th dose dependent rect. 6 3
421 291.32 humidity 80.0 720 < th dose independent rect. 18 1
422 291.32 radiation 1.0 90 > th dose independent rect. 6 3
431 291.64 humidity 70.0 10 > th dose independent rect. 18 12
434 291.67 humidity 50.0 90 > th dose dependent rect. 6 3
436 291.69 radiation 40.0 270 < th dose dependent rect. 6 1
439 291.74 temperature 10.0 10 > th dose independent rect. 2 4
441 291.74 temperature 30.0 10 < th dose independent rect. 2 4
442 291.74 humidity 50.0 10 > th dose independent rect. 2 4
445 291.74 atmosphere 995.0 10 > th dose independent rect. 2 4
446 291.74 atmosphere 1010.0 10 < th dose independent rect. 2 4
451 291.74 temperature 10.0 10 > th dose independent rect. 6 20
454 291.76 atmosphere 995.0 90 > th dose dependent rect. 6 3
456 291.77 wind 9.0 10 < th dose independent rect. 6 20
459 291.80 temperature 30.0 720 > th dose dependent rect. 18 1
476 291.84 humidity 90.0 720 < th dose dependent rect. 18 3
485 291.93 humidity 90.0 270 < th dose independent rect. 6 1
487 291.99 temperature 25.0 90 < th dose independent rect. 3 2
493 292.05 atmosphere 995.0 90 > th dose independent rect. 9 21
520 292.31 humidity 50.0 10 > th dose independent rect. 6 14
528 292.35 humidity 90.0 90 < th dose independent rect. 6 3
539 292.45 radiation 40.0 90 < th dose dependent rect. 6 3
550 292.67 humidity 70.0 1440 > th dose independent rect. 3 4
551 292.67 atmosphere 995.0 270 > th dose dependent rect. 6 1
552 292.69 atmosphere 995.0 10 > th dose dependent rect. 20 10
556 292.74 temperature 20.0 720 > th dose independent rect. 23 1
562 292.84 wind 9.0 90 < th dose independent rect. 9 21
579 292.87 temperature 15.0 720 > th dose independent rect. 21 20
580 292.87 precipitation 0.1 10 < th dose independent rect. 6 20
581 292.87 precipitation 0.1 10 < th dose dependent rect. 6 20
584 292.88 atmosphere 995.0 10 > th dose independent rect. 6 14
592 293.05 radiation 20.0 10 < th dose independent rect. 6 20
599 293.20 radiation 1.0 270 > th dose independent rect. 18 14
607 293.22 temperature 15.0 720 > th dose dependent rect. 21 12
624 293.47 humidity 50.0 10 > th dose dependent rect. 2 4
625 293.48 temperature 10.0 1440 > th dose independent rect. 7 3
628 293.48 atmosphere 995.0 1440 > th dose independent rect. 7 3
629 293.48 atmosphere 1015.0 1440 < th dose independent rect. 7 3
630 293.48 temperature 10.0 1440 > th dose independent rect. 10 21
643 293.59 wind 9.0 1440 < th dose independent rect. 3 4
644 293.59 temperature 10.0 1440 > th dose independent rect. 3 4
647 293.59 temperature 30.0 1440 < th dose independent rect. 3 4
651 293.59 humidity 50.0 1440 > th dose independent rect. 3 4
656 293.59 atmosphere 995.0 1440 > th dose independent rect. 3 4
662 293.59 temperature 10.0 1440 > th dose independent rect. 7 20
672 293.70 atmosphere 1005.0 30 > th dose independent rect. 11 19
676 293.72 temperature 20.0 10 > th dose independent rect. 6 18
699 293.95 radiation 40.0 10 < th dose dependent rect. 2 4
711 294.01 temperature 10.0 10 > th dose dependent rect. 6 18
721 294.22 atmosphere 1015.0 10 < th dose independent rect. 6 20
725 294.33 wind 5.0 30 < th dose dependent rect. 24 6
732 294.37 wind 7.0 720 < th dose independent rect. 17 12
762 294.52 temperature 15.0 270 > th dose independent rect. 13 11
771 294.54 wind 7.0 4320 > th dose independent rect. 13 6
773 294.56 wind 1.0 270 > th dose independent rect. 6 1
774 294.56 wind 7.0 4320 > th dose independent rect. 13 4
791 294.64 humidity 90.0 720 < th dose dependent rect. 18 1
809 294.86 wind 3.0 90 < th dose independent rect. 3 2
829 294.93 wind 7.0 4320 < th dose independent rect. 13 4
835 295.00 wind 7.0 4320 < th dose independent rect. 13 6
851 295.11 humidity 60.0 720 > th dose dependent rect. 19 5
887 295.43 wind 7.0 720 < th dose independent rect. 18 1
907 295.58 temperature 10.0 270 > th dose independent rect. 24 13
908 295.58 atmosphere 995.0 270 > th dose independent rect. 24 13
917 295.67 atmosphere 1015.0 270 < th dose independent rect. 24 13
934 295.82 radiation 10.0 4320 < th dose dependent rect. 3 2
943 295.85 temperature 10.0 720 > th dose independent rect. 17 4
944 295.85 radiation 30.0 720 < th dose independent rect. 17 4
991 296.21 precipitation 0.1 720 < th dose independent rect. 9 12
992 296.21 humidity 50.0 10 > th dose dependent rect. 20 10
993 296.21 precipitation 0.1 720 < th dose dependent rect. 9 12
996 296.24 wind 1.0 720 > th dose independent rect. 18 1
998 296.28 precipitation 0.1 270 < th dose independent rect. 17 12
1000 296.28 precipitation 0.1 270 < th dose dependent rect. 17 12