Os01g0694300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0694300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.8 | 0.261 | 8.86 | 0.284 | 0.563 | 0.163 | -1.12 | 2.34 | 0.111 | 10.2 | 20.29 | 7 | -- | -- |
| 35.01 | 0.276 | 8.91 | -0.151 | 0.544 | 0.362 | -0.681 | -- | -0.0236 | 9.61 | 19.24 | 3 | -- | -- |
| 31.34 | 0.261 | 8.85 | 0.289 | 0.656 | 0.176 | -- | 2.3 | 0.107 | 10.2 | 18.91 | 606 | -- | -- |
| 36.41 | 0.281 | 8.91 | -0.171 | 0.686 | 0.337 | -- | -- | -0.0205 | 9.75 | 21.22 | 438 | -- | -- |
| 51.95 | 0.338 | 8.91 | -0.0376 | -- | 0.541 | -- | 1.12 | -0.00305 | -- | 18.91 | 606 | -- | -- |
| 37 | 0.285 | 8.89 | -0.0742 | 0.606 | -- | -0.572 | -- | 0.0422 | 10.4 | -- | -- | -- | -- |
| 38.3 | 0.29 | 8.9 | -0.0962 | 0.608 | -- | -- | -- | 0.0412 | 10.6 | -- | -- | -- | -- |
| 53.32 | 0.342 | 8.93 | -0.226 | -- | 0.591 | -- | -- | -0.0572 | -- | 18.91 | 606 | -- | -- |
| 37.02 | 0.283 | 8.9 | -- | 0.662 | 0.26 | -- | -- | 0.031 | 9.95 | 24.1 | 450 | -- | -- |
| 61.05 | 0.365 | 8.91 | -0.107 | -- | -- | -- | -- | 0.0383 | -- | -- | -- | -- | -- |
| 38.55 | 0.29 | 8.89 | -- | 0.609 | -- | -- | -- | 0.0519 | 10.6 | -- | -- | -- | -- |
| 54.6 | 0.345 | 8.93 | -- | -- | 0.54 | -- | -- | -0.025 | -- | 18.91 | 606 | -- | -- |
| 61.36 | 0.366 | 8.91 | -- | -- | -- | -- | -- | 0.0502 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.50 | temperature | 10 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 4 | 30.55 | temperature | 10 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 5 | 30.61 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 5 |
| 8 | 30.65 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 10 | 30.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 9 |
| 20 | 30.70 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 26 | 30.73 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 27 | 30.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 31 | 30.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 32 | 30.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 35 | 30.75 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 42 | 30.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 62 | 30.81 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 63 | 30.81 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 66 | 30.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 71 | 30.83 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 72 | 30.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 75 | 30.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 79 | 30.85 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 88 | 30.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 97 | 30.88 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 108 | 30.90 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 127 | 30.93 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 138 | 30.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 164 | 30.99 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 21 |
| 166 | 30.99 | temperature | 25 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 184 | 31.02 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 199 | 31.04 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 23 |
| 208 | 31.05 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 255 | 31.10 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 256 | 31.11 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 279 | 31.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 297 | 31.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 300 | 31.14 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 305 | 31.15 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 306 | 31.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 319 | 31.16 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 332 | 31.17 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 335 | 31.18 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 347 | 31.18 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 351 | 31.19 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 385 | 31.21 | temperature | 25 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 386 | 31.21 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 423 | 31.24 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 427 | 31.24 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 436 | 31.25 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 451 | 31.26 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 21 |
| 460 | 31.26 | temperature | 25 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 494 | 31.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 519 | 31.31 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 526 | 31.31 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 565 | 31.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 678 | 31.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 755 | 31.45 | temperature | 25 | 1440 | < th | dose independent | sin | 13 | NA |
| 814 | 31.48 | temperature | 25 | 270 | < th | dose dependent | sin | 15 | NA |
| 864 | 31.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 932 | 31.54 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 14 |