Os01g0693400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os01g0693400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 218.07 | 0.694 | 11.5 | 2.2 | 1.26 | -2.04 | 0.675 | 4.05 | 0.544 | 21.9 | 26.55 | 1623 | -- | -- |
| 222 | 0.694 | 11.6 | 1.19 | 1.26 | -1.68 | 0.494 | -- | 0.34 | 21.7 | 26.6 | 1682 | -- | -- |
| 219.75 | 0.69 | 11.5 | 2.2 | 1.27 | -2.07 | -- | 4.3 | 0.538 | 21.8 | 26.69 | 1636 | -- | -- |
| 223.12 | 0.696 | 11.6 | 1.23 | 1.25 | -1.62 | -- | -- | 0.322 | 22 | 26.87 | 1631 | -- | -- |
| 312.65 | 0.824 | 11.5 | 2.18 | -- | -1.89 | -- | 4 | 0.538 | -- | 26.6 | 1562 | -- | -- |
| 314.19 | 0.831 | 11.6 | 0.783 | 1.18 | -- | 0.602 | -- | 0.297 | 22 | -- | -- | -- | -- |
| 315.6 | 0.832 | 11.6 | 0.76 | 1.17 | -- | -- | -- | 0.296 | 22 | -- | -- | -- | -- |
| 315.39 | 0.827 | 11.6 | 1.23 | -- | -1.47 | -- | -- | 0.34 | -- | 26.7 | 1561 | -- | -- |
| 259.69 | 0.751 | 11.7 | -- | 1.25 | -1.4 | -- | -- | 0.0989 | 22.1 | 27.94 | 1633 | -- | -- |
| 398.68 | 0.933 | 11.6 | 0.775 | -- | -- | -- | -- | 0.297 | -- | -- | -- | -- | -- |
| 330.84 | 0.851 | 11.6 | -- | 1.18 | -- | -- | -- | 0.211 | 22.1 | -- | -- | -- | -- |
| 352.44 | 0.874 | 11.6 | -- | -- | -1.26 | -- | -- | 0.135 | -- | 27.62 | 1573 | -- | -- |
| 414.52 | 0.95 | 11.6 | -- | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 223.17 | humidity | 80 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 2 | 223.70 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 34 | 224.17 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 74 | 224.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 136 | 225.20 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 152 | 225.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 153 | 225.42 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 181 | 225.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 7 |
| 218 | 226.20 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 219 | 226.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 225 | 226.33 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 268 | 226.82 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 288 | 227.09 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 310 | 227.34 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 21 |
| 318 | 227.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 12 |
| 334 | 227.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 17 |
| 344 | 227.56 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 405 | 227.83 | humidity | 50 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 427 | 227.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 434 | 227.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 442 | 227.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 469 | 228.02 | temperature | 30 | 1440 | < th | dose independent | sin | 1 | NA |
| 523 | 228.17 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 536 | 228.22 | humidity | 70 | 1440 | > th | dose independent | sin | 12 | NA |
| 702 | 228.62 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 722 | 228.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 20 |
| 756 | 228.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 17 |
| 774 | 228.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 793 | 228.80 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 807 | 228.82 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 825 | 228.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 22 |
| 903 | 229.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 905 | 229.03 | humidity | 80 | 1440 | < th | dose dependent | sin | 13 | NA |
| 935 | 229.15 | temperature | 30 | 1440 | > th | dose independent | sin | 1 | NA |