Os01g0692300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0692300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.62 | 0.303 | 13.7 | 1.06 | 0.136 | 0.389 | -0.751 | -2.82 | -0.019 | 21.5 | 1.135 | 75 | -- | -- |
| 45.91 | 0.318 | 13.7 | 0.957 | 0.161 | 0.0969 | -0.828 | -- | -0.0186 | 20.3 | 1.135 | 75 | -- | -- |
| 43.69 | 0.308 | 13.7 | 1.08 | 0.141 | 0.375 | -- | -2.72 | -0.0178 | 21.5 | 1.121 | 74 | -- | -- |
| 47.8 | 0.324 | 13.7 | 0.999 | 0.161 | 0.109 | -- | -- | -0.0292 | 21.6 | 1.696 | 163 | -- | -- |
| 44.84 | 0.312 | 13.7 | 1.08 | -- | 0.4 | -- | -2.76 | -0.0165 | -- | 1.1 | 75 | -- | -- |
| 46.29 | 0.319 | 13.7 | 0.946 | 0.176 | -- | -0.834 | -- | -0.0149 | 20.1 | -- | -- | -- | -- |
| 48.36 | 0.326 | 13.7 | 0.969 | 0.176 | -- | -- | -- | -0.0158 | 20.3 | -- | -- | -- | -- |
| 48.77 | 0.325 | 13.7 | 1.02 | -- | 0.188 | -- | -- | -0.0297 | -- | 3.3 | 560 | -- | -- |
| 54.94 | 0.345 | 13.8 | -- | 0.312 | -0.711 | -- | -- | -0.245 | 18.9 | 7.4 | 33960 | -- | -- |
| 50.08 | 0.331 | 13.7 | 0.967 | -- | -- | -- | -- | -0.0177 | -- | -- | -- | -- | -- |
| 73.09 | 0.4 | 13.8 | -- | 0.172 | -- | -- | -- | -0.124 | 20.7 | -- | -- | -- | -- |
| 55.27 | 0.346 | 13.8 | -- | -- | -0.722 | -- | -- | -0.249 | -- | 7.4 | 34525 | -- | -- |
| 74.77 | 0.404 | 13.8 | -- | -- | -- | -- | -- | -0.125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 23 |
| 2 | 38.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 3 | 38.54 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 5 | 38.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 21 |
| 6 | 38.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 9 | 38.94 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 13 |
| 10 | 38.96 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 5 | 20 |
| 11 | 38.96 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 5 | 20 |
| 13 | 39.03 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 11 |
| 15 | 39.13 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 9 |
| 17 | 39.15 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 9 |
| 18 | 39.16 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 22 | 39.22 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 6 |
| 26 | 39.32 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 4 |
| 31 | 39.36 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 35 | 39.41 | wind | 1.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 38 | 39.44 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 39 | 39.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 45 | 39.47 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 53 | 39.55 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 10 |
| 54 | 39.55 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 10 |
| 56 | 39.56 | humidity | 50.0 | 90 | > th | dose independent | rect. | 5 | 20 |
| 61 | 39.59 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 12 |
| 63 | 39.60 | wind | 1.0 | 90 | > th | dose independent | rect. | 15 | 10 |
| 72 | 39.63 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 73 | 39.63 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 77 | 39.64 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 3 |
| 78 | 39.64 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 3 |
| 79 | 39.64 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 4 |
| 84 | 39.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 86 | 39.65 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 87 | 39.65 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 3 |
| 92 | 39.65 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 3 |
| 97 | 39.65 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 99 | 39.65 | temperature | 30.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 100 | 39.65 | humidity | 50.0 | 30 | > th | dose independent | rect. | 1 | 4 |
| 104 | 39.65 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 106 | 39.65 | radiation | 1.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 111 | 39.65 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 20 |
| 113 | 39.65 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 114 | 39.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 128 | 39.66 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 146 | 39.67 | wind | 1.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 153 | 39.67 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 159 | 39.69 | radiation | 1.0 | 10 | < th | dose independent | rect. | 1 | 13 |
| 163 | 39.70 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 170 | 39.72 | radiation | 1.0 | 10 | < th | dose independent | rect. | 1 | 11 |
| 175 | 39.72 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 187 | 39.74 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 10 |
| 217 | 39.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 233 | 39.81 | radiation | 1.0 | 10 | < th | dose independent | rect. | 1 | 7 |
| 329 | 39.89 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 21 |
| 364 | 39.93 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 402 | 40.03 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 14 |
| 416 | 40.06 | wind | 1.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 429 | 40.11 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 14 |
| 436 | 40.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 10 |
| 437 | 40.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 14 |
| 438 | 40.12 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 14 |
| 447 | 40.15 | wind | 1.0 | 90 | > th | dose independent | rect. | 1 | 4 |
| 448 | 40.15 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 10 |
| 449 | 40.15 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 21 |
| 460 | 40.18 | wind | 1.0 | 270 | < th | dose independent | rect. | 9 | 17 |
| 469 | 40.21 | wind | 9.0 | 30 | < th | dose dependent | rect. | 1 | 4 |
| 473 | 40.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 14 |
| 479 | 40.23 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 24 | 3 |
| 494 | 40.24 | humidity | 50.0 | 90 | > th | dose independent | rect. | 15 | 10 |
| 498 | 40.24 | wind | 3.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 507 | 40.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 14 |
| 512 | 40.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 14 |
| 514 | 40.26 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 2 |
| 524 | 40.30 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 24 | 2 |
| 532 | 40.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 10 |
| 533 | 40.34 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 544 | 40.36 | radiation | 40.0 | 270 | < th | dose independent | rect. | 19 | 14 |
| 545 | 40.36 | temperature | 20.0 | 30 | > th | dose independent | rect. | 13 | 16 |
| 548 | 40.36 | wind | 3.0 | 90 | < th | dose dependent | rect. | 23 | 6 |
| 552 | 40.37 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 554 | 40.37 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 13 | 16 |
| 565 | 40.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 10 |
| 573 | 40.42 | wind | 1.0 | 270 | < th | dose independent | rect. | 13 | 13 |
| 584 | 40.44 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 1 | 18 |
| 585 | 40.45 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 3 |
| 589 | 40.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 14 |
| 592 | 40.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 14 |
| 594 | 40.47 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 20 |
| 597 | 40.48 | radiation | 20.0 | 90 | < th | dose independent | rect. | 15 | 10 |
| 606 | 40.50 | temperature | 30.0 | 10 | < th | dose independent | rect. | 16 | 9 |
| 616 | 40.51 | wind | 3.0 | 90 | < th | dose dependent | rect. | 19 | 10 |
| 628 | 40.54 | wind | 9.0 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 629 | 40.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 632 | 40.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 636 | 40.54 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 645 | 40.54 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 2 | 4 |
| 646 | 40.54 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 2 | 4 |
| 656 | 40.54 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 20 |
| 660 | 40.54 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 11 |
| 688 | 40.58 | wind | 3.0 | 30 | < th | dose independent | rect. | 1 | 4 |
| 701 | 40.61 | humidity | 60.0 | 10 | > th | dose independent | rect. | 16 | 9 |
| 702 | 40.61 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 708 | 40.61 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 15 | 10 |
| 731 | 40.65 | radiation | 1.0 | 90 | < th | dose independent | rect. | 24 | 21 |
| 771 | 40.68 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 13 | 16 |
| 847 | 40.74 | wind | 1.0 | 90 | > th | dose independent | sin | 16 | NA |
| 851 | 40.74 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 17 |
| 898 | 40.78 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 21 |
| 989 | 40.87 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 14 |