Os01g0689000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1639 family protein.
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Os01g0689000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1639 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.7 | 0.369 | 9.12 | 0.846 | 0.0192 | -0.824 | 0.743 | 0.7 | 0.401 | 18.2 | 25.4 | 1111 | -- | -- |
| 61.9 | 0.366 | 9.13 | 0.727 | 0.133 | -0.81 | 0.606 | -- | 0.367 | 19.4 | 25.5 | 1027 | -- | -- |
| 62.56 | 0.368 | 9.11 | 0.923 | 0.121 | -0.938 | -- | 1.08 | 0.428 | 22.3 | 25.37 | 1057 | -- | -- |
| 62.8 | 0.369 | 9.14 | 0.671 | 0.113 | -0.811 | -- | -- | 0.358 | 22.3 | 25.4 | 1057 | -- | -- |
| 63.03 | 0.37 | 9.11 | 0.875 | -- | -0.826 | -- | 0.829 | 0.41 | -- | 25.47 | 1151 | -- | -- |
| 81.67 | 0.424 | 9.15 | 0.459 | 0.0241 | -- | 0.808 | -- | 0.297 | 17.3 | -- | -- | -- | -- |
| 82.89 | 0.426 | 9.15 | 0.46 | 0.0854 | -- | -- | -- | 0.301 | 12.5 | -- | -- | -- | -- |
| 63.23 | 0.37 | 9.14 | 0.68 | -- | -0.742 | -- | -- | 0.365 | -- | 25.46 | 1149 | -- | -- |
| 74.36 | 0.402 | 9.16 | -- | 0.0823 | -0.665 | -- | -- | 0.272 | 22.1 | 25.65 | 1044 | -- | -- |
| 83.34 | 0.427 | 9.15 | 0.457 | -- | -- | -- | -- | 0.3 | -- | -- | -- | -- | -- |
| 88.46 | 0.44 | 9.16 | -- | 0.0788 | -- | -- | -- | 0.25 | 12.2 | -- | -- | -- | -- |
| 74.59 | 0.402 | 9.16 | -- | -- | -0.596 | -- | -- | 0.249 | -- | 26.4 | 1128 | -- | -- |
| 88.85 | 0.44 | 9.16 | -- | -- | -- | -- | -- | 0.249 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.95 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 3 | 61.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 5 | 61.36 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 6 | 61.36 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 7 | 61.45 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 10 |
| 10 | 61.50 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 11 | 61.55 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 12 | 61.59 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 27 | 61.87 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 29 | 62.04 | temperature | 25.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 36 | 62.12 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 58 | 62.42 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 61 | 62.49 | wind | 9.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 67 | 62.58 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 76 | 62.63 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 82 | 62.70 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 5 |
| 86 | 62.75 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 92 | 62.79 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 94 | 62.81 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 96 | 62.82 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 116 | 62.91 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 10 | 15 |
| 118 | 62.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 123 | 62.93 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 10 | 8 |
| 142 | 62.99 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 166 | 63.03 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 227 | 63.16 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 252 | 63.21 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 259 | 63.22 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 9 |
| 261 | 63.22 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 21 |
| 279 | 63.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 332 | 63.32 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 380 | 63.38 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 11 |
| 384 | 63.39 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 394 | 63.40 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 18 |
| 426 | 63.44 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 461 | 63.49 | wind | 7.0 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 471 | 63.50 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 16 |
| 530 | 63.58 | wind | 9.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 538 | 63.59 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 545 | 63.62 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 559 | 63.65 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 17 | 22 |
| 621 | 63.77 | wind | 9.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 666 | 63.84 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 675 | 63.86 | wind | 7.0 | 43200 | > th | dose independent | rect. | 9 | 13 |
| 685 | 63.87 | wind | 7.0 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 696 | 63.89 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 705 | 63.90 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 17 |
| 720 | 63.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 727 | 63.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 746 | 63.96 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 21 |
| 766 | 63.97 | wind | 7.0 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 768 | 63.98 | wind | 7.0 | 43200 | > th | dose independent | rect. | 9 | 17 |
| 791 | 63.99 | wind | 7.0 | 43200 | < th | dose independent | rect. | 9 | 13 |
| 793 | 63.99 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 17 |
| 797 | 63.99 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 10 |
| 829 | 64.02 | wind | 7.0 | 43200 | > th | dose independent | rect. | 9 | 21 |
| 836 | 64.03 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 846 | 64.04 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 853 | 64.04 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 6 |
| 865 | 64.06 | wind | 7.0 | 43200 | > th | dose independent | no | NA | NA |
| 874 | 64.06 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 21 |
| 920 | 64.09 | wind | 7.0 | 43200 | < th | dose independent | rect. | 9 | 17 |
| 951 | 64.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 953 | 64.11 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 14 |
| 957 | 64.12 | wind | 7.0 | 43200 | < th | dose independent | rect. | 10 | 20 |
| 998 | 64.15 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |