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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0688800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.4 (0.0283) R2 : 0.000755
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.035 (0.0596) R2dN8 : 0.000975 R2N8 : 0.000755
σ : 0.533
deviance : 130.38
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.78 0.521 3.27 1.04 0.139 -0.993 -0.17 6.45 0.112 11.5 28.6 1622 -- --
125.47 0.522 3.39 -0.0517 0.143 -0.239 -0.231 -- 0.0328 10.5 26.28 2685 -- --
122.86 0.516 3.27 1 0.143 -0.937 -- 5.98 0.136 11.8 28.3 1619 -- --
125.17 0.521 3.38 -0.0292 0.111 -0.298 -- -- 0.119 11.3 18.55 7454 -- --
124.12 0.519 3.27 0.982 -- -0.938 -- 5.96 0.121 -- 28.4 1610 -- --
127.86 0.53 3.4 -0.176 0.153 -- -0.178 -- 0.0158 10.8 -- -- -- --
127.99 0.53 3.4 -0.183 0.154 -- -- -- 0.0154 11 -- -- -- --
126.19 0.523 3.38 0.0321 -- -0.443 -- -- 0.122 -- 10.39 6650 -- --
125.01 0.521 3.38 -- 0.142 -0.367 -- -- 0.112 11.2 15.4 7467 -- --
129.46 0.532 3.4 -0.187 -- -- -- -- 0.0143 -- -- -- -- --
128.87 0.531 3.39 -- 0.156 -- -- -- 0.0358 11.1 -- -- -- --
126.21 0.523 3.38 -- -- -0.425 -- -- 0.115 -- 9.437 6650 -- --
130.38 0.533 3.4 -- -- -- -- -- 0.035 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 115.56 radiation 20.0 43200 < th dose dependent rect. 23 1
9 117.66 wind 9.0 30 < th dose independent rect. 23 23
10 118.04 wind 9.0 1440 < th dose independent rect. 23 1
11 118.04 temperature 10.0 1440 > th dose independent rect. 23 1
14 118.04 temperature 30.0 1440 < th dose independent rect. 23 1
18 118.04 humidity 50.0 1440 > th dose independent rect. 23 1
28 118.04 atmosphere 995.0 1440 > th dose independent rect. 23 1
29 118.04 radiation 1.0 1440 < th dose independent rect. 23 1
49 118.04 temperature 10.0 1440 > th dose independent rect. 24 23
52 118.04 radiation 1.0 1440 < th dose dependent rect. 23 1
59 118.09 temperature 25.0 30 > th dose independent rect. 22 1
61 118.10 temperature 25.0 30 > th dose dependent rect. 22 1
63 118.13 atmosphere 1005.0 30 > th dose dependent rect. 22 1
64 118.15 humidity 90.0 30 < th dose independent rect. 22 1
65 118.20 humidity 90.0 30 < th dose dependent rect. 22 1
66 118.22 atmosphere 1005.0 30 > th dose independent rect. 22 1
76 118.35 wind 1.0 30 > th dose independent rect. 22 1
77 118.37 wind 3.0 30 < th dose independent rect. 22 1
81 118.41 temperature 10.0 30 > th dose independent rect. 22 1
83 118.41 temperature 30.0 30 < th dose independent rect. 22 1
84 118.41 humidity 50.0 30 > th dose independent rect. 22 1
88 118.41 atmosphere 995.0 30 > th dose independent rect. 22 1
90 118.41 atmosphere 1010.0 30 < th dose independent rect. 22 1
92 118.41 radiation 1.0 30 < th dose independent rect. 22 1
97 118.41 temperature 10.0 30 > th dose independent rect. 23 23
98 118.41 radiation 1.0 30 < th dose dependent rect. 22 1
103 118.43 precipitation 0.1 30 < th dose independent rect. 22 1
104 118.43 wind 9.0 30 < th dose dependent rect. 22 1
106 118.43 precipitation 0.1 30 < th dose dependent rect. 22 1
108 118.48 humidity 50.0 30 > th dose dependent rect. 22 1
112 118.52 wind 1.0 30 > th dose dependent rect. 22 1
116 118.65 atmosphere 1015.0 30 < th dose dependent rect. 22 1
119 118.83 atmosphere 995.0 30 > th dose independent rect. 23 23
121 118.86 temperature 30.0 30 < th dose dependent rect. 22 1
128 119.17 temperature 10.0 30 > th dose dependent rect. 23 23
158 119.37 precipitation 0.1 1440 < th dose independent rect. 23 1
160 119.37 precipitation 0.1 1440 < th dose dependent rect. 23 1
165 119.51 precipitation 0.1 30 < th dose independent rect. 23 23
166 119.51 precipitation 0.1 30 < th dose dependent rect. 23 23
169 119.57 humidity 50.0 30 > th dose independent rect. 23 23
183 120.22 wind 1.0 43200 > th dose independent rect. 17 2
186 120.27 radiation 40.0 720 < th dose dependent rect. 15 9
188 120.36 wind 1.0 43200 < th dose independent rect. 17 2
194 120.64 radiation 1.0 14400 > th dose independent rect. 4 2
204 120.66 radiation 1.0 14400 < th dose independent rect. 23 7
205 120.67 radiation 1.0 14400 < th dose independent rect. 2 4
207 120.67 radiation 1.0 14400 < th dose independent rect. 19 11
210 120.69 radiation 1.0 14400 < th dose independent rect. 4 2
214 120.74 radiation 30.0 720 < th dose independent rect. 15 9
243 121.05 humidity 80.0 43200 > th dose independent rect. 7 6
244 121.07 radiation 20.0 720 > th dose dependent rect. 15 17
245 121.08 wind 3.0 43200 < th dose independent rect. 9 1
249 121.21 wind 3.0 43200 > th dose independent rect. 9 1
250 121.22 humidity 80.0 43200 > th dose independent rect. 8 4
251 121.23 radiation 40.0 720 > th dose dependent rect. 15 1
270 121.31 wind 3.0 43200 < th dose dependent rect. 9 1
273 121.34 humidity 80.0 43200 < th dose independent rect. 8 5
274 121.38 humidity 70.0 43200 > th dose dependent rect. 7 6
278 121.41 wind 9.0 43200 > th dose dependent rect. 13 20
279 121.42 humidity 90.0 43200 > th dose independent rect. 5 2
280 121.42 humidity 80.0 43200 < th dose independent rect. 9 2
285 121.47 humidity 90.0 43200 > th dose dependent rect. 6 1
293 121.52 humidity 90.0 43200 < th dose independent rect. 6 1
296 121.54 wind 1.0 43200 < th dose dependent rect. 14 1
306 121.58 wind 9.0 43200 > th dose dependent sin 20 NA
308 121.58 wind 1.0 43200 > th dose dependent rect. 9 1
309 121.59 wind 9.0 43200 > th dose dependent rect. 9 12
312 121.60 humidity 80.0 43200 > th dose dependent rect. 8 1
314 121.61 humidity 80.0 14400 > th dose independent rect. 8 2
315 121.61 wind 9.0 43200 > th dose independent rect. 6 9
317 121.62 wind 7.0 43200 > th dose dependent rect. 6 9
331 121.66 wind 9.0 43200 < th dose independent rect. 6 9
337 121.66 wind 9.0 43200 > th dose dependent rect. 8 19
339 121.67 radiation 20.0 720 > th dose dependent rect. 15 2
360 121.68 wind 9.0 43200 > th dose independent rect. 8 6
361 121.68 temperature 25.0 720 < th dose independent rect. 24 8
372 121.69 wind 9.0 43200 > th dose independent rect. 18 21
380 121.70 wind 9.0 43200 > th dose independent rect. 20 19
387 121.70 wind 9.0 43200 > th dose dependent rect. 17 23
392 121.71 wind 9.0 43200 > th dose dependent rect. 2 19
405 121.73 wind 9.0 43200 > th dose independent rect. 23 16
414 121.74 humidity 90.0 14400 > th dose dependent rect. 22 1
415 121.74 wind 1.0 43200 < th dose dependent rect. 17 2
423 121.75 humidity 90.0 43200 < th dose independent rect. 4 5
424 121.75 wind 9.0 43200 < th dose independent rect. 7 7
427 121.75 wind 9.0 43200 > th dose independent rect. 2 13
440 121.76 humidity 90.0 43200 > th dose dependent rect. 18 1
451 121.77 wind 9.0 43200 < th dose dependent rect. 9 1
459 121.78 wind 9.0 43200 < th dose independent rect. 1 14
460 121.78 wind 9.0 43200 < th dose independent rect. 23 16
477 121.79 wind 9.0 43200 < th dose independent rect. 20 19
479 121.79 wind 9.0 43200 > th dose dependent no NA NA
488 121.79 wind 9.0 43200 > th dose dependent rect. 20 23
493 121.81 wind 9.0 43200 > th dose independent sin 2 NA
496 121.81 wind 9.0 43200 < th dose independent rect. 18 21
497 121.81 wind 9.0 43200 > th dose independent rect. 13 22
499 121.81 wind 7.0 43200 > th dose dependent sin 2 NA
541 121.87 wind 9.0 43200 < th dose independent sin 3 NA
573 121.90 wind 1.0 1440 < th dose dependent rect. 15 1
574 121.90 humidity 70.0 43200 > th dose dependent rect. 10 1
579 121.90 wind 7.0 43200 > th dose dependent rect. 23 16
591 121.91 wind 9.0 43200 > th dose dependent rect. 20 20
593 121.92 radiation 20.0 720 > th dose independent rect. 15 2
669 121.95 wind 9.0 43200 > th dose independent rect. 23 22
690 121.97 wind 9.0 43200 < th dose independent rect. 13 22
704 121.98 radiation 1.0 720 > th dose dependent rect. 15 15
713 121.99 wind 9.0 43200 > th dose independent rect. 6 15
715 121.99 wind 9.0 43200 > th dose independent rect. 6 21
746 122.02 humidity 90.0 14400 < th dose independent rect. 2 6
750 122.02 wind 9.0 43200 > th dose independent rect. 6 18
764 122.03 atmosphere 995.0 43200 > th dose independent rect. 7 15
767 122.03 atmosphere 995.0 43200 < th dose independent rect. 7 16
785 122.04 wind 9.0 43200 > th dose independent rect. 2 19
791 122.04 wind 9.0 43200 > th dose dependent sin 12 NA
812 122.05 temperature 25.0 720 > th dose dependent rect. 23 9
838 122.07 atmosphere 995.0 43200 > th dose independent sin 21 NA
839 122.07 humidity 90.0 43200 > th dose independent rect. 2 11
841 122.07 atmosphere 995.0 43200 > th dose independent rect. 5 14
862 122.08 wind 9.0 43200 > th dose independent no NA NA
864 122.08 atmosphere 995.0 43200 < th dose independent sin 21 NA
869 122.08 humidity 90.0 14400 < th dose independent rect. 24 8
871 122.08 atmosphere 995.0 43200 < th dose independent rect. 5 14
879 122.08 wind 9.0 43200 > th dose independent rect. 2 22
886 122.08 humidity 60.0 90 > th dose dependent rect. 23 11
926 122.10 humidity 50.0 720 > th dose dependent rect. 12 12
933 122.11 humidity 90.0 43200 < th dose independent rect. 3 9
971 122.13 atmosphere 995.0 43200 < th dose independent rect. 7 12