Os01g0687800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant-specific FAD-dependent oxidoreductase family protein.
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Os01g0687800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant-specific FAD-dependent oxidoreductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.35 | 0.617 | 6.7 | 2.99 | 0.573 | 1.08 | 1.35 | 2.04 | 0.356 | 8.99 | 20.42 | 1463 | -- | -- |
| 175.75 | 0.617 | 6.77 | 2.36 | 0.593 | 1.22 | 1.69 | -- | 0.189 | 8.28 | 21.23 | 1641 | -- | -- |
| 177.57 | 0.621 | 6.67 | 3.22 | 0.582 | 1.01 | -- | 2.55 | 0.436 | 9.6 | 20.62 | 1446 | -- | -- |
| 180.79 | 0.626 | 6.74 | 2.5 | 0.651 | 1.31 | -- | -- | 0.266 | 10.1 | 20.9 | 1285 | -- | -- |
| 197.08 | 0.654 | 6.71 | 3.03 | -- | 1.08 | -- | 2.06 | 0.372 | -- | 20.36 | 1495 | -- | -- |
| 223.22 | 0.7 | 6.71 | 2.81 | 0.529 | -- | 1.73 | -- | 0.471 | 8.12 | -- | -- | -- | -- |
| 229.38 | 0.709 | 6.71 | 2.87 | 0.554 | -- | -- | -- | 0.475 | 9.7 | -- | -- | -- | -- |
| 200.49 | 0.659 | 6.78 | 2.44 | -- | 1.15 | -- | -- | 0.204 | -- | 21.5 | 1479 | -- | -- |
| 186.83 | 0.637 | 6.95 | -- | 0.591 | 2.59 | -- | -- | -0.619 | 9.98 | -57.05 | 47520 | -- | -- |
| 247.59 | 0.735 | 6.72 | 2.86 | -- | -- | -- | -- | 0.476 | -- | -- | -- | -- | -- |
| 446.16 | 0.988 | 6.78 | -- | 0.55 | -- | -- | -- | 0.155 | 9.3 | -- | -- | -- | -- |
| 204.32 | 0.666 | 6.97 | -- | -- | 2.69 | -- | -- | -0.623 | -- | 7.757 | 38964 | -- | -- |
| 463.81 | 1.01 | 6.79 | -- | -- | -- | -- | -- | 0.158 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.26 | temperature | 30.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 2 | 162.50 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 14 | 14 |
| 12 | 163.51 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 13 | 163.53 | temperature | 10.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 102 | 168.19 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 15 |
| 127 | 168.71 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 6 |
| 141 | 169.02 | temperature | 25.0 | 720 | < th | dose independent | sin | 16 | NA |
| 178 | 169.71 | temperature | 30.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 181 | 169.77 | temperature | 25.0 | 720 | < th | dose independent | rect. | 13 | 13 |
| 185 | 169.84 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 189 | 169.89 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 190 | 169.90 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 10 |
| 193 | 169.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 194 | 169.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 205 | 169.99 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 215 | 170.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 22 | 2 |
| 216 | 170.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 220 | 170.12 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 266 | 170.44 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 272 | 170.45 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 276 | 170.48 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 289 | 170.53 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 317 | 170.63 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 340 | 170.69 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 8 |
| 393 | 170.87 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 14 | 15 |
| 424 | 170.96 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 18 |
| 426 | 170.98 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 440 | 170.99 | wind | 1.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 443 | 171.00 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 18 |
| 505 | 171.14 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 13 | 16 |
| 540 | 171.25 | radiation | 1.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 543 | 171.26 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 548 | 171.26 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 552 | 171.26 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 564 | 171.27 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 566 | 171.27 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 723 | 171.52 | radiation | 1.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 749 | 171.55 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 811 | 171.68 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 851 | 171.74 | temperature | 25.0 | 720 | < th | dose independent | rect. | 11 | 21 |
| 918 | 171.82 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 995 | 171.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 23 |