Os01g0683700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF599 family protein.
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Os01g0683700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF599 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.74 | 0.378 | 9.72 | -0.151 | 0.931 | -0.591 | 0.993 | -0.662 | -0.262 | 5.32 | 80 | 811 | -- | -- |
| 64.89 | 0.375 | 9.73 | -0.229 | 0.822 | -0.609 | 0.915 | -- | -0.266 | 5.02 | 77.74 | 977 | -- | -- |
| 66.24 | 0.379 | 9.72 | -0.183 | 0.851 | -0.681 | -- | -0.564 | -0.268 | 5.36 | 79 | 962 | -- | -- |
| 66.45 | 0.38 | 9.73 | -0.235 | 0.826 | -0.705 | -- | -- | -0.271 | 5.45 | 78 | 978 | -- | -- |
| 91.56 | 0.446 | 9.75 | -0.23 | -- | -0.917 | -- | -0.193 | -0.312 | -- | 75 | 1249 | -- | -- |
| 72.45 | 0.399 | 9.73 | -0.166 | 0.78 | -- | 0.93 | -- | -0.245 | 4.08 | -- | -- | -- | -- |
| 74.88 | 0.405 | 9.73 | -0.176 | 0.788 | -- | -- | -- | -0.25 | 4.18 | -- | -- | -- | -- |
| 91.56 | 0.446 | 9.75 | -0.252 | -- | -0.955 | -- | -- | -0.311 | -- | 76 | 1253 | -- | -- |
| 67.8 | 0.384 | 9.73 | -- | 0.814 | -0.705 | -- | -- | -0.264 | 5.47 | 78 | 970 | -- | -- |
| 108.47 | 0.487 | 9.73 | -0.145 | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
| 75.7 | 0.407 | 9.73 | -- | 0.784 | -- | -- | -- | -0.231 | 4.19 | -- | -- | -- | -- |
| 93.08 | 0.449 | 9.74 | -- | -- | -1.02 | -- | -- | -0.271 | -- | 76.29 | 1262 | -- | -- |
| 109.03 | 0.487 | 9.73 | -- | -- | -- | -- | -- | -0.213 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.81 | wind | 7 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 2 | 60.94 | wind | 7 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 3 | 61.10 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 4 |
| 6 | 61.18 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 8 |
| 15 | 61.45 | wind | 9 | 14400 | < th | dose independent | rect. | 7 | 8 |
| 24 | 61.61 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 43 | 61.89 | humidity | 60 | 720 | > th | dose dependent | rect. | 16 | 7 |
| 70 | 62.04 | humidity | 70 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 78 | 62.11 | humidity | 80 | 720 | > th | dose independent | rect. | 17 | 3 |
| 84 | 62.13 | temperature | 25 | 270 | > th | dose dependent | rect. | 24 | 14 |
| 85 | 62.14 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 1 |
| 100 | 62.20 | humidity | 80 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 119 | 62.30 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 7 |
| 125 | 62.31 | temperature | 25 | 270 | > th | dose independent | rect. | 24 | 15 |
| 139 | 62.37 | wind | 9 | 14400 | < th | dose independent | sin | 3 | NA |
| 149 | 62.40 | wind | 7 | 14400 | > th | dose dependent | sin | 3 | NA |
| 161 | 62.46 | wind | 9 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 191 | 62.54 | wind | 9 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 198 | 62.56 | wind | 1 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 208 | 62.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 215 | 62.60 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 220 | 62.61 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 223 | 62.62 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 251 | 62.66 | radiation | 1 | 720 | < th | dose dependent | rect. | 11 | 16 |
| 283 | 62.73 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 19 |
| 285 | 62.74 | wind | 9 | 14400 | > th | dose independent | sin | 2 | NA |
| 291 | 62.75 | humidity | 80 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 307 | 62.78 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 13 |
| 320 | 62.80 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 11 |
| 350 | 62.85 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 358 | 62.85 | radiation | 1 | 720 | < th | dose dependent | rect. | 11 | 7 |
| 416 | 62.96 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 426 | 62.98 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 7 |
| 491 | 63.09 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 498 | 63.11 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 5 |
| 503 | 63.12 | humidity | 80 | 720 | < th | dose independent | rect. | 17 | 3 |
| 504 | 63.12 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 514 | 63.13 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 517 | 63.14 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 519 | 63.14 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 546 | 63.16 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 573 | 63.19 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 580 | 63.19 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 599 | 63.21 | radiation | 1 | 720 | < th | dose independent | rect. | 11 | 16 |
| 628 | 63.24 | radiation | 1 | 720 | < th | dose dependent | sin | 18 | NA |
| 648 | 63.26 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 665 | 63.28 | radiation | 40 | 270 | < th | dose independent | rect. | 4 | 17 |
| 677 | 63.29 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 701 | 63.32 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 704 | 63.32 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 724 | 63.34 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 8 |
| 761 | 63.38 | radiation | 1 | 720 | < th | dose independent | sin | 17 | NA |
| 776 | 63.40 | humidity | 80 | 14400 | > th | dose independent | rect. | 3 | 2 |
| 784 | 63.40 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 10 |
| 789 | 63.41 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 2 |
| 826 | 63.44 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 835 | 63.44 | temperature | 25 | 270 | > th | dose dependent | sin | 6 | NA |
| 841 | 63.45 | humidity | 80 | 14400 | < th | dose independent | rect. | 3 | 2 |
| 912 | 63.52 | radiation | 1 | 720 | < th | dose independent | rect. | 11 | 7 |
| 953 | 63.56 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 1 |
| 974 | 63.57 | humidity | 80 | 14400 | < th | dose dependent | rect. | 21 | 6 |