FiT-DB / Search/ Help/ Sample detail

Os01g0680500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.54 (0.0258) R2 : 0.478
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.26 (0.0622) R2dC : 0.47 R2C : 0.463
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.175 (0.0543) R2dN8 : 0.0153 R2N8 : 0.00866
σ : 0.487
deviance : 108.38
__
_____
C
peak time of C : 1.41
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
96.11 0.461 8.55 -0.0728 1.43 -1.27 0.583 1.94 -0.26 3.76 1.299 976 -- --
99.72 0.465 8.53 -0.0224 1.39 -1.7 1.4 -- -0.245 4.63 1.119 1029 -- --
96.29 0.457 8.54 -0.0479 1.64 -1.27 -- 2.31 -0.242 3.54 1.34 856 -- --
103.12 0.473 8.53 0.0109 1.6 -1.49 -- -- -0.234 3.89 0.54 924 -- --
142.69 0.559 8.52 0.225 -- 0.756 -- -0.39 -0.101 -- 3.35 1228 -- --
107.6 0.486 8.54 0.173 1.26 -- 0.0546 -- -0.155 1.42 -- -- -- --
107.61 0.486 8.54 0.171 1.26 -- -- -- -0.156 1.41 -- -- -- --
143.62 0.561 8.52 0.225 -- 0.754 -- -- -0.105 -- 3.056 1265 -- --
103.12 0.473 8.53 -- 1.6 -1.5 -- -- -0.234 3.91 0.54 924 -- --
204.64 0.668 8.52 0.221 -- -- -- -- -0.129 -- -- -- -- --
108.38 0.487 8.54 -- 1.26 -- -- -- -0.175 1.41 -- -- -- --
144.73 0.562 8.52 -- -- 0.758 -- -- -0.123 -- 3.799 4717 -- --
205.93 0.67 8.53 -- -- -- -- -- -0.153 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.10 temperature 10.0 720 > th dose dependent rect. 17 7
4 92.50 humidity 50.0 720 > th dose dependent rect. 17 13
10 92.71 humidity 50.0 720 > th dose dependent rect. 18 10
11 92.86 humidity 90.0 720 > th dose dependent rect. 20 3
12 92.88 atmosphere 1010.0 270 < th dose dependent rect. 22 7
16 92.95 wind 9.0 270 < th dose independent rect. 22 16
25 93.07 humidity 70.0 720 > th dose independent rect. 18 10
34 93.29 atmosphere 1015.0 270 < th dose independent rect. 14 8
35 93.32 temperature 15.0 270 > th dose independent rect. 22 16
36 93.32 temperature 10.0 10 > th dose dependent sin 10 NA
42 93.45 precipitation 0.1 270 < th dose independent rect. 14 8
43 93.45 precipitation 0.1 270 < th dose dependent rect. 14 8
44 93.46 wind 1.0 270 > th dose independent rect. 14 8
47 93.49 wind 1.0 30 > th dose independent rect. 17 8
51 93.52 wind 1.0 90 > th dose independent rect. 15 10
52 93.53 humidity 50.0 270 > th dose independent rect. 22 16
53 93.55 radiation 30.0 14400 < th dose independent rect. 17 9
56 93.56 temperature 10.0 30 > th dose dependent rect. 17 8
57 93.57 humidity 90.0 720 < th dose independent rect. 21 3
60 93.58 atmosphere 1010.0 10 < th dose dependent rect. 24 6
61 93.59 temperature 10.0 270 > th dose independent rect. 14 8
63 93.59 atmosphere 995.0 270 > th dose independent rect. 22 16
65 93.59 atmosphere 1010.0 90 < th dose dependent rect. 23 10
72 93.63 humidity 50.0 720 > th dose dependent sin 12 NA
76 93.69 temperature 30.0 720 < th dose independent rect. 16 14
83 93.74 radiation 40.0 30 < th dose dependent rect. 15 10
85 93.75 wind 9.0 30 < th dose independent rect. 1 16
87 93.77 radiation 40.0 270 < th dose independent rect. 14 8
94 93.83 temperature 30.0 720 < th dose independent rect. 18 9
118 93.97 atmosphere 1015.0 30 < th dose independent rect. 17 8
119 93.97 precipitation 0.1 270 < th dose independent rect. 22 16
120 93.97 precipitation 0.1 270 < th dose dependent rect. 22 16
122 93.99 temperature 25.0 720 < th dose independent sin 12 NA
131 94.03 radiation 20.0 90 < th dose independent rect. 15 10
133 94.04 atmosphere 1005.0 270 < th dose independent rect. 22 7
135 94.05 humidity 70.0 720 > th dose independent rect. 18 14
138 94.07 humidity 90.0 270 < th dose independent rect. 14 9
147 94.12 atmosphere 995.0 270 > th dose independent rect. 14 8
169 94.22 wind 9.0 270 < th dose independent rect. 14 8
173 94.23 humidity 50.0 30 > th dose independent rect. 1 16
187 94.27 atmosphere 1010.0 270 < th dose dependent rect. 1 1
199 94.30 atmosphere 995.0 30 > th dose independent rect. 17 8
200 94.30 precipitation 0.1 30 < th dose independent rect. 17 8
206 94.30 precipitation 0.1 30 < th dose dependent rect. 17 8
209 94.31 temperature 10.0 30 > th dose independent rect. 17 8
215 94.31 temperature 10.0 30 > th dose independent rect. 1 16
217 94.31 atmosphere 1015.0 30 < th dose independent rect. 1 16
220 94.32 humidity 50.0 30 > th dose independent rect. 17 8
236 94.35 temperature 25.0 720 > th dose dependent rect. 21 2
248 94.39 atmosphere 995.0 30 > th dose independent rect. 1 16
302 94.52 atmosphere 1005.0 270 < th dose independent rect. 23 4
303 94.52 wind 9.0 30 < th dose independent rect. 17 8
317 94.56 precipitation 0.1 30 < th dose independent rect. 1 16
321 94.56 precipitation 0.1 30 < th dose dependent rect. 1 16
338 94.61 temperature 10.0 1440 > th dose independent rect. 16 10
342 94.61 temperature 10.0 1440 > th dose independent rect. 2 14
363 94.64 humidity 90.0 720 > th dose independent rect. 21 2
394 94.71 wind 1.0 30 > th dose independent rect. 1 16
398 94.72 temperature 10.0 1440 > th dose independent rect. 18 8
401 94.72 humidity 50.0 1440 > th dose independent rect. 18 8
403 94.72 radiation 20.0 1440 < th dose independent rect. 18 8
415 94.72 temperature 10.0 1440 > th dose independent rect. 2 16
447 94.79 humidity 50.0 30 > th dose independent rect. 1 14
506 94.92 radiation 10.0 30 < th dose independent rect. 12 13
511 94.93 temperature 10.0 720 > th dose dependent sin 14 NA
518 94.94 wind 1.0 270 > th dose independent rect. 15 15
528 94.96 atmosphere 1015.0 270 < th dose independent rect. 22 16
546 95.01 humidity 70.0 720 > th dose independent sin 12 NA
680 95.29 temperature 20.0 10 > th dose independent rect. 1 5
713 95.38 temperature 15.0 720 > th dose dependent rect. 21 2
753 95.46 precipitation 0.1 270 < th dose independent rect. 16 15
758 95.46 precipitation 0.1 270 < th dose dependent rect. 16 15
764 95.49 precipitation 0.1 30 < th dose independent sin 9 NA
772 95.49 precipitation 0.1 30 < th dose dependent sin 9 NA
790 95.54 atmosphere 1010.0 10 < th dose dependent rect. 22 10
791 95.55 wind 5.0 720 < th dose independent rect. 21 8
807 95.58 temperature 30.0 10 < th dose independent rect. 17 8
885 95.71 atmosphere 1010.0 10 < th dose dependent rect. 1 3
895 95.73 humidity 50.0 270 > th dose independent rect. 14 8
904 95.74 atmosphere 1005.0 10 < th dose independent rect. 24 8
912 95.75 wind 9.0 270 < th dose independent rect. 7 9
921 95.77 radiation 10.0 30 < th dose independent rect. 6 19
946 95.83 radiation 1.0 720 > th dose independent sin 16 NA
972 95.85 radiation 10.0 10 < th dose dependent rect. 12 13
974 95.86 temperature 30.0 30 < th dose independent rect. 1 16
996 95.90 atmosphere 1005.0 270 > th dose independent rect. 23 9
998 95.90 humidity 90.0 720 < th dose dependent rect. 20 3