Os01g0678800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0678800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Heavy metal transport/detoxification protein domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.11 | 0.54 | 5.51 | 0.76 | 0.112 | -0.119 | -0.614 | -5.23 | 0.652 | 1.48 | 30 | 1433 | -- | -- |
| 135.45 | 0.542 | 5.39 | 1.8 | 0.09 | -0.814 | -0.852 | -- | 0.735 | 1.83 | 31.1 | 4074 | -- | -- |
| 133.12 | 0.537 | 5.52 | 0.729 | 0.139 | -0.084 | -- | -5.58 | 0.662 | 23.2 | 30.08 | 1293 | -- | -- |
| 134.88 | 0.541 | 5.36 | 1.85 | 0.137 | -0.766 | -- | -- | 0.853 | 22.4 | 29.44 | 1531 | -- | -- |
| 134.4 | 0.54 | 5.52 | 0.724 | -- | -0.0828 | -- | -5.52 | 0.656 | -- | 30.04 | 1433 | -- | -- |
| 160.71 | 0.594 | 5.36 | 1.62 | 0.00647 | -- | -0.902 | -- | 0.834 | 2.82 | -- | -- | -- | -- |
| 162.87 | 0.598 | 5.36 | 1.64 | 0.106 | -- | -- | -- | 0.84 | 20.6 | -- | -- | -- | -- |
| 135.47 | 0.542 | 5.35 | 1.9 | -- | -0.781 | -- | -- | 0.835 | -- | 29.62 | 1537 | -- | -- |
| 223.39 | 0.696 | 5.39 | -- | 0.147 | -0.546 | -- | -- | 0.572 | 22.7 | 30.6 | 2550 | -- | -- |
| 163.5 | 0.597 | 5.35 | 1.64 | -- | -- | -- | -- | 0.839 | -- | -- | -- | -- | -- |
| 233.83 | 0.715 | 5.4 | -- | 0.106 | -- | -- | -- | 0.658 | 21.8 | -- | -- | -- | -- |
| 223.69 | 0.697 | 5.42 | -- | -- | -0.523 | -- | -- | 0.543 | -- | 31 | 4472 | -- | -- |
| 234.49 | 0.715 | 5.39 | -- | -- | -- | -- | -- | 0.657 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 128.10 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 2 | 128.42 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 3 | 128.48 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 4 | 128.48 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 9 | 129.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 10 | 129.13 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 15 | 129.37 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 16 | 129.39 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 18 | 129.41 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 16 |
| 35 | 129.62 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 44 | 129.97 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 9 |
| 47 | 130.02 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 64 | 130.10 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 5 |
| 69 | 130.16 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 76 | 130.20 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 90 | 130.20 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 91 | 130.21 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 104 | 130.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 108 | 130.26 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 109 | 130.26 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 113 | 130.29 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 114 | 130.29 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 18 |
| 122 | 130.34 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 125 | 130.36 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 127 | 130.37 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 128 | 130.38 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 135 | 130.45 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 136 | 130.45 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 140 | 130.50 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 165 | 130.57 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 167 | 130.59 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 186 | 130.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 192 | 130.69 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 197 | 130.70 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 210 | 130.73 | temperature | 30.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 211 | 130.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 214 | 130.77 | temperature | 30.0 | 1440 | > th | dose independent | sin | 6 | NA |
| 217 | 130.77 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 231 | 130.84 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 233 | 130.85 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 234 | 130.85 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 241 | 130.87 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 253 | 130.90 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 267 | 130.96 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 15 |
| 274 | 131.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 355 | 131.14 | wind | 9.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 373 | 131.18 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 15 |
| 383 | 131.21 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 394 | 131.24 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 451 | 131.43 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 535 | 131.58 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 538 | 131.58 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 567 | 131.65 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 585 | 131.68 | wind | 9.0 | 43200 | > th | dose independent | sin | 12 | NA |
| 620 | 131.73 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 635 | 131.77 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 696 | 131.91 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 18 |
| 783 | 132.00 | wind | 9.0 | 43200 | < th | dose independent | sin | 12 | NA |
| 804 | 132.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 805 | 132.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 810 | 132.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 822 | 132.07 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 838 | 132.09 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 13 | 22 |
| 875 | 132.12 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |