Os01g0674700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0674700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 423.52 | 0.967 | 3.56 | 0.281 | 0.282 | 1.23 | -0.3 | -0.0618 | 0.155 | 14.7 | 9.001 | 1591 | -- | -- |
| 423.51 | 0.958 | 3.56 | 0.276 | 0.282 | 1.25 | -0.304 | -- | 0.15 | 14.6 | 9.048 | 1591 | -- | -- |
| 423.74 | 0.959 | 3.56 | 0.242 | 0.277 | 1.17 | -- | -0.306 | 0.149 | 15.1 | 9.1 | 1591 | -- | -- |
| 423.72 | 0.959 | 3.56 | 0.273 | 0.286 | 1.25 | -- | -- | 0.152 | 15.2 | 9.121 | 1591 | -- | -- |
| 427.24 | 0.968 | 3.6 | 0.217 | -- | 5.26 | -- | 9.05 | 0.0897 | -- | 9.135 | 1591 | -- | -- |
| 439.78 | 0.983 | 3.58 | 0.0716 | 0.294 | -- | -0.24 | -- | 0.0662 | 15.1 | -- | -- | -- | -- |
| 439.92 | 0.982 | 3.58 | 0.0666 | 0.298 | -- | -- | -- | 0.065 | 15.4 | -- | -- | -- | -- |
| 428.22 | 0.964 | 3.56 | 0.248 | -- | 1.22 | -- | -- | 0.107 | -- | 9.6 | 1591 | -- | -- |
| 421.35 | 0.961 | 3.58 | -- | 0.274 | 3.06 | -- | -- | 0.0765 | 14.8 | 9.192 | 1591 | -- | -- |
| 444.89 | 0.986 | 3.58 | 0.054 | -- | -- | -- | -- | 0.0571 | -- | -- | -- | -- | -- |
| 440.04 | 0.981 | 3.59 | -- | 0.296 | -- | -- | -- | 0.0576 | 15.4 | -- | -- | -- | -- |
| 425.7 | 0.964 | 3.58 | -- | -- | 3.1 | -- | -- | 0.071 | -- | 9.192 | 1591 | -- | -- |
| 444.97 | 0.985 | 3.59 | -- | -- | -- | -- | -- | 0.0511 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 408.68 | wind | 5.0 | 720 | > th | dose dependent | rect. | 2 | 3 |
| 2 | 409.49 | wind | 5.0 | 720 | > th | dose independent | rect. | 2 | 3 |
| 18 | 412.39 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 22 | 412.76 | temperature | 25.0 | 90 | > th | dose independent | rect. | 5 | 1 |
| 39 | 414.33 | wind | 5.0 | 720 | < th | dose independent | rect. | 24 | 8 |
| 57 | 415.04 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 62 | 415.25 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 64 | 415.28 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 6 |
| 79 | 415.72 | wind | 7.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 82 | 415.77 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 5 | 2 |
| 92 | 415.98 | wind | 7.0 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 95 | 416.07 | wind | 5.0 | 720 | > th | dose independent | rect. | 5 | 1 |
| 110 | 416.30 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 111 | 416.34 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 119 | 416.57 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 143 | 417.13 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 150 | 417.20 | wind | 7.0 | 1440 | < th | dose independent | rect. | 21 | 6 |
| 179 | 417.78 | wind | 1.0 | 30 | > th | dose dependent | rect. | 5 | 2 |
| 186 | 418.22 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 207 | 418.72 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 211 | 418.84 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 216 | 419.09 | wind | 9.0 | 1440 | < th | dose independent | rect. | 19 | 3 |
| 224 | 419.25 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 5 | 5 |
| 257 | 419.73 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 7 |
| 260 | 419.73 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 261 | 419.73 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 266 | 419.77 | wind | 9.0 | 1440 | < th | dose independent | rect. | 19 | 11 |
| 290 | 420.01 | humidity | 80.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 327 | 420.41 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 400 | 420.93 | humidity | 90.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 403 | 420.95 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 4 | 4 |
| 435 | 420.99 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 519 | 421.20 | wind | 7.0 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 520 | 421.21 | wind | 9.0 | 1440 | > th | dose independent | rect. | 15 | 2 |
| 663 | 421.69 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 695 | 421.82 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 734 | 421.98 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 740 | 422.02 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 3 | 1 |
| 746 | 422.03 | wind | 7.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 748 | 422.03 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 3 | 1 |
| 754 | 422.05 | wind | 5.0 | 720 | < th | dose independent | rect. | 3 | 2 |
| 764 | 422.09 | wind | 7.0 | 720 | < th | dose independent | rect. | 18 | 17 |
| 773 | 422.12 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 1 |
| 798 | 422.19 | wind | 7.0 | 720 | < th | dose independent | sin | 9 | NA |
| 804 | 422.21 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 820 | 422.31 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 834 | 422.37 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 843 | 422.39 | wind | 7.0 | 1440 | > th | dose independent | sin | 12 | NA |
| 858 | 422.46 | wind | 9.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 869 | 422.46 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 14 | 20 |
| 900 | 422.57 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 8 |
| 913 | 422.60 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 15 | 14 |
| 926 | 422.62 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 14 | 12 |
| 940 | 422.64 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 14 | 9 |
| 963 | 422.71 | wind | 7.0 | 1440 | < th | dose independent | sin | 12 | NA |
| 975 | 422.73 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 5 |