Os01g0672300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0672300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.15 | 0.294 | 12.4 | 1.2 | 0.726 | 0.213 | 0.202 | 2.16 | 0.288 | 2.85 | 18.37 | 3097 | -- | -- |
| 43.42 | 0.307 | 12.4 | 0.543 | 0.687 | 0.246 | 0.28 | -- | 0.182 | 2.62 | 23.1 | 2821 | -- | -- |
| 39.28 | 0.292 | 12.4 | 1.2 | 0.723 | 0.202 | -- | 2.14 | 0.289 | 2.82 | 18.52 | 3011 | -- | -- |
| 42.96 | 0.305 | 12.4 | 0.576 | 0.701 | 0.287 | -- | -- | 0.123 | 2.79 | 23.3 | 2749 | -- | -- |
| 67.86 | 0.384 | 12.4 | 1.2 | -- | 0.326 | -- | 2.12 | 0.275 | -- | 19.58 | 2648 | -- | -- |
| 45.17 | 0.315 | 12.4 | 0.704 | 0.742 | -- | 0.239 | -- | 0.177 | 2.86 | -- | -- | -- | -- |
| 45.37 | 0.315 | 12.4 | 0.698 | 0.743 | -- | -- | -- | 0.176 | 2.82 | -- | -- | -- | -- |
| 66.32 | 0.381 | 12.4 | 0.831 | -- | -0.659 | -- | -- | 0.273 | -- | 23.8 | 2621 | -- | -- |
| 42.84 | 0.305 | 12.5 | -- | 0.728 | 0.577 | -- | -- | -0.119 | 2.86 | 21.4 | 47520 | -- | -- |
| 77.28 | 0.411 | 12.4 | 0.73 | -- | -- | -- | -- | 0.195 | -- | -- | -- | -- | -- |
| 58.21 | 0.357 | 12.4 | -- | 0.756 | -- | -- | -- | 0.0981 | 2.83 | -- | -- | -- | -- |
| 73.37 | 0.399 | 12.5 | -- | -- | 0.622 | -- | -- | -0.121 | -- | 21.54 | 47520 | -- | -- |
| 91.34 | 0.446 | 12.4 | -- | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.73 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 10 | 37.11 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 27 | 37.52 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 1 |
| 43 | 37.73 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 12 |
| 61 | 38.03 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 2 |
| 77 | 38.24 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 78 | 38.25 | temperature | 20 | 720 | > th | dose dependent | sin | 12 | NA |
| 83 | 38.30 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 85 | 38.32 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 5 |
| 100 | 38.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 116 | 38.46 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 4 |
| 146 | 38.58 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |
| 169 | 38.66 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 176 | 38.68 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 209 | 38.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 9 |
| 251 | 38.83 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 263 | 38.84 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 17 |
| 272 | 38.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 373 | 39.01 | temperature | 20 | 10 | > th | dose dependent | sin | 9 | NA |
| 624 | 39.21 | wind | 1 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 994 | 39.41 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |