Os01g0667900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin-like, plant II family protein.
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Os01g0667900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin-like, plant II family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 229.98 | 0.713 | 10.3 | -1.93 | 2.33 | 1.19 | 2.03 | -5.28 | -0.0737 | 10.8 | 50.06 | 698 | -- | -- |
| 242.79 | 0.731 | 10.3 | -2.07 | 2.36 | -0.247 | 1.73 | -- | -0.0309 | 10.8 | 50.06 | 698 | -- | -- |
| 242.55 | 0.725 | 10.3 | -1.76 | 2.34 | 1.2 | -- | -4.89 | -0.08 | 10.9 | 52.03 | 509 | -- | -- |
| 251.48 | 0.739 | 10.3 | -1.93 | 2.31 | 0.504 | -- | -- | -0.0555 | 10.9 | 60 | 496 | -- | -- |
| 555.78 | 1.1 | 10.4 | -1.75 | -- | 1.76 | -- | -4.42 | -0.207 | -- | 53.95 | 630 | -- | -- |
| 243.34 | 0.731 | 10.3 | -2.07 | 2.37 | -- | 1.75 | -- | -0.0376 | 10.8 | -- | -- | -- | -- |
| 256.06 | 0.749 | 10.3 | -2 | 2.37 | -- | -- | -- | -0.0327 | 10.7 | -- | -- | -- | -- |
| 479.1 | 1.02 | 10.3 | -1.88 | -- | 1.95 | -- | -- | 0.0554 | -- | 79 | 878 | -- | -- |
| 347.68 | 0.868 | 10.3 | -- | 2.31 | 0.844 | -- | -- | 0.111 | 11.1 | 55.32 | 463 | -- | -- |
| 602.08 | 1.15 | 10.4 | -2.04 | -- | -- | -- | -- | -0.0464 | -- | -- | -- | -- | -- |
| 361.17 | 0.889 | 10.2 | -- | 2.38 | -- | -- | -- | 0.19 | 10.8 | -- | -- | -- | -- |
| 573.51 | 1.12 | 10.3 | -- | -- | 2.16 | -- | -- | 0.217 | -- | 77.13 | 880 | -- | -- |
| 712.3 | 1.25 | 10.3 | -- | -- | -- | -- | -- | 0.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 215.11 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 2 | 215.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 3 | 215.28 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 4 | 215.28 | wind | 3.0 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 5 | 216.07 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 3 |
| 12 | 216.79 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 6 |
| 21 | 217.19 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 23 | 217.24 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 19 | 16 |
| 34 | 217.66 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 70 | 218.57 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 10 |
| 81 | 218.77 | wind | 3.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 113 | 219.21 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 143 | 219.69 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 13 |
| 173 | 220.07 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 13 |
| 178 | 220.11 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 180 | 220.13 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 7 | 4 |
| 182 | 220.15 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 191 | 220.18 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 218 | 220.42 | wind | 3.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 244 | 220.61 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 270 | 220.80 | wind | 3.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 278 | 220.84 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 8 |
| 287 | 220.89 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 304 | 220.94 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 19 |
| 356 | 221.23 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 440 | 221.61 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 497 | 221.87 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 10 | 23 |
| 517 | 221.95 | wind | 3.0 | 14400 | < th | dose dependent | no | NA | NA |
| 544 | 222.05 | wind | 5.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 567 | 222.15 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 616 | 222.37 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 20 |
| 618 | 222.38 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 653 | 222.51 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 671 | 222.58 | wind | 5.0 | 43200 | < th | dose independent | rect. | 23 | 2 |
| 723 | 222.78 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 20 |
| 830 | 223.16 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 902 | 223.40 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 929 | 223.45 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 11 |
| 933 | 223.47 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 6 |