Os01g0659200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit).
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Os01g0659200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.81 | 0.224 | 14 | -0.731 | 0.245 | 0.681 | -0.322 | -0.94 | -0.0763 | 12.5 | 26.71 | 5502 | -- | -- |
| 23.48 | 0.226 | 14 | -0.511 | 0.248 | 0.549 | -0.311 | -- | -0.138 | 12.3 | 26.24 | 6837 | -- | -- |
| 23.11 | 0.224 | 14.1 | -1.02 | 0.251 | 0.805 | -- | -2.27 | -0.0649 | 13.1 | 28.24 | 5577 | -- | -- |
| 23.43 | 0.225 | 14 | -0.502 | 0.253 | 0.581 | -- | -- | -0.0299 | 12.9 | 26.75 | 5492 | -- | -- |
| 25.82 | 0.237 | 14.1 | -1.05 | -- | 0.779 | -- | -2.18 | -0.133 | -- | 27.98 | 5930 | -- | -- |
| 36.54 | 0.283 | 14 | -0.287 | 0.189 | -- | -0.426 | -- | -0.0158 | 12 | -- | -- | -- | -- |
| 37.3 | 0.286 | 14 | -0.303 | 0.193 | -- | -- | -- | -0.0171 | 12.5 | -- | -- | -- | -- |
| 26.51 | 0.24 | 14 | -0.509 | -- | 0.545 | -- | -- | -0.0705 | -- | 26.6 | 5970 | -- | -- |
| 29.19 | 0.252 | 14 | -- | 0.247 | 0.46 | -- | -- | 0.0739 | 13 | 28.5 | 5514 | -- | -- |
| 39.63 | 0.294 | 14 | -0.31 | -- | -- | -- | -- | -0.0204 | -- | -- | -- | -- | -- |
| 39.72 | 0.295 | 14 | -- | 0.197 | -- | -- | -- | 0.0166 | 12.6 | -- | -- | -- | -- |
| 32.4 | 0.265 | 14 | -- | -- | 0.462 | -- | -- | 0.0316 | -- | 28.5 | 6040 | -- | -- |
| 42.16 | 0.303 | 14 | -- | -- | -- | -- | -- | 0.014 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.14 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 2 | 23.15 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 3 | 23.16 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 14 | 23.23 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 17 | 23.24 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 19 | 23.24 | wind | 1 | 43200 | > th | dose dependent | rect. | 2 | 12 |
| 54 | 23.34 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 57 | 23.35 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 64 | 23.36 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 68 | 23.36 | temperature | 25 | 4320 | > th | dose dependent | rect. | 2 | 8 |
| 72 | 23.37 | wind | 1 | 43200 | > th | dose dependent | sin | 6 | NA |
| 94 | 23.41 | wind | 9 | 43200 | < th | dose dependent | sin | 6 | NA |
| 150 | 23.48 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 16 |
| 159 | 23.50 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 16 |
| 174 | 23.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 176 | 23.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 10 |
| 179 | 23.53 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 14 |
| 333 | 23.66 | wind | 3 | 43200 | > th | dose independent | rect. | 21 | 14 |
| 393 | 23.73 | temperature | 25 | 4320 | > th | dose dependent | sin | 6 | NA |
| 431 | 23.77 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 457 | 23.80 | wind | 3 | 43200 | > th | dose independent | sin | 7 | NA |
| 476 | 23.82 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 495 | 23.84 | wind | 3 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 508 | 23.86 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 523 | 23.87 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 525 | 23.87 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 596 | 23.93 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 603 | 23.94 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 766 | 24.05 | wind | 3 | 43200 | < th | dose independent | sin | 7 | NA |
| 774 | 24.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 13 |
| 852 | 24.10 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 893 | 24.12 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 894 | 24.12 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 923 | 24.13 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 21 |
| 970 | 24.14 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 984 | 24.14 | temperature | 25 | 4320 | > th | dose dependent | rect. | 12 | 23 |
| 997 | 24.15 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 18 |