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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0651300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to GDSL-motif lipase/hydrolase-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.14 (0.0363) R2 : 0.144
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 4.93 (0.586) R2dE : 0.133 R2E : 0.133
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.162 (0.0764) R2dN8 : 0.0109 R2N8 : 0.0114
σ : 0.681
deviance : 213.85
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_____
C
peak time of C : --
E
wheather : wind
threshold : 1.002
memory length : 90
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 14
open length of G : 0.645

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
205.7 0.674 3.12 -0.0655 0.361 1.1 -0.643 15.9 -0.185 7.8 1.1 95 14 0.85
207.72 0.671 3.11 -0.104 0.324 3.47 -0.95 -- -0.128 7.89 0.936 95 14 0.652
206.48 0.669 3.12 -0.085 0.379 1.11 -- 16.4 -0.187 6.97 1.1 95 14 0.875
207.23 0.67 3.11 -0.109 0.345 4.07 -- -- -0.136 7.13 0.9252 95 14 0.637
213.87 0.681 3.13 -0.0663 -- 0.889 -- 16.5 -0.182 -- 1.099 96 14 0.958
239.04 0.725 3.14 -0.0433 0.307 -- -0.904 -- -0.201 8.31 -- -- -- --
241.47 0.728 3.14 -0.0723 0.316 -- -- -- -0.202 7.79 -- -- -- --
213.23 0.68 3.14 -0.145 -- 4.88 -- -- -0.157 -- 1 89 14 0.649
207.2 0.67 3.11 -- 0.348 4.54 -- -- -0.135 7.1 0.9287 95 14 0.633
246.87 0.734 3.15 -0.0685 -- -- -- -- -0.197 -- -- -- -- --
241.61 0.727 3.14 -- 0.315 -- -- -- -0.194 7.81 -- -- -- --
213.85 0.681 3.14 -- -- 4.93 -- -- -0.162 -- 1.002 90 14 0.645
246.99 0.734 3.14 -- -- -- -- -- -0.19 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 209.12 wind 1.0 90 < th dose independent rect. 14 1
2 213.90 atmosphere 1000.0 30 < th dose dependent rect. 14 7
39 214.40 atmosphere 1000.0 90 < th dose independent rect. 14 1
113 220.67 wind 1.0 90 < th dose dependent rect. 14 1
115 220.85 wind 3.0 30 < th dose dependent rect. 24 17
133 223.03 atmosphere 1005.0 10 > th dose dependent rect. 1 1
135 223.09 wind 3.0 10 < th dose dependent rect. 16 1
140 223.34 humidity 70.0 4320 > th dose independent rect. 1 6
143 223.63 humidity 70.0 1440 < th dose dependent rect. 7 1
173 224.25 humidity 70.0 1440 < th dose independent rect. 6 2
184 224.27 radiation 10.0 10 > th dose dependent sin 10 NA
203 224.51 wind 1.0 90 < th dose independent rect. 1 15
250 225.21 wind 1.0 90 < th dose independent rect. 4 12
258 225.26 atmosphere 1000.0 90 < th dose dependent sin 18 NA
279 225.45 atmosphere 1000.0 270 < th dose dependent rect. 12 1
285 225.50 wind 1.0 10 > th dose independent sin 23 NA
286 225.50 atmosphere 1000.0 270 < th dose independent rect. 12 1
342 225.69 wind 9.0 90 < th dose dependent rect. 11 19
361 225.93 radiation 40.0 90 < th dose independent rect. 11 19
395 226.20 radiation 40.0 90 < th dose independent rect. 24 16
402 226.23 wind 9.0 90 > th dose independent rect. 15 1
405 226.23 wind 9.0 90 > th dose dependent rect. 15 1
407 226.24 wind 9.0 10 > th dose independent rect. 15 1
415 226.24 wind 9.0 10 > th dose dependent rect. 15 1
433 226.30 wind 1.0 270 > th dose independent rect. 3 7
437 226.34 radiation 40.0 10 < th dose independent rect. 11 19
444 226.42 humidity 70.0 4320 > th dose independent rect. 5 2
449 226.44 wind 1.0 10 < th dose independent sin 23 NA
451 226.45 atmosphere 1015.0 30 < th dose independent rect. 16 8
464 226.50 humidity 70.0 270 < th dose dependent rect. 6 2
478 226.51 wind 9.0 270 < th dose dependent rect. 22 18
482 226.54 temperature 20.0 10 < th dose independent rect. 2 1
501 226.56 wind 1.0 90 < th dose dependent rect. 1 4
518 226.66 wind 1.0 90 < th dose independent sin 1 NA
527 226.76 humidity 70.0 270 < th dose independent rect. 6 2
545 226.78 wind 9.0 270 < th dose dependent rect. 9 20
547 226.80 wind 3.0 10 < th dose independent rect. 16 1
549 226.80 wind 3.0 30 < th dose dependent rect. 4 13
575 226.95 radiation 20.0 10 < th dose dependent rect. 7 17
596 227.00 wind 1.0 90 < th dose dependent rect. 4 17
597 227.01 humidity 70.0 1440 > th dose independent rect. 20 12
622 227.15 humidity 70.0 4320 > th dose independent rect. 21 10
640 227.24 precipitation 0.1 270 < th dose independent rect. 9 20
642 227.24 precipitation 0.1 270 < th dose dependent rect. 9 20
648 227.28 radiation 40.0 10 < th dose independent rect. 24 16
654 227.33 radiation 20.0 10 > th dose independent rect. 7 3
686 227.37 temperature 20.0 90 > th dose independent rect. 6 5
687 227.37 radiation 10.0 10 > th dose dependent rect. 7 3
691 227.37 wind 1.0 10 < th dose dependent rect. 9 7
731 227.45 radiation 30.0 1440 < th dose independent rect. 1 6
758 227.54 radiation 20.0 10 > th dose independent sin 9 NA
761 227.55 radiation 30.0 10 < th dose independent sin 8 NA
771 227.59 radiation 1.0 720 < th dose independent sin 6 NA
774 227.60 temperature 30.0 270 < th dose independent rect. 23 16
784 227.63 radiation 40.0 10 < th dose dependent sin 7 NA
791 227.66 wind 1.0 10 < th dose dependent rect. 1 1
793 227.67 humidity 60.0 270 > th dose independent rect. 5 4
807 227.72 wind 1.0 10 < th dose independent rect. 9 7
820 227.78 radiation 30.0 1440 < th dose independent rect. 6 1
822 227.78 humidity 90.0 720 < th dose dependent rect. 6 1
834 227.83 humidity 70.0 90 < th dose dependent rect. 19 14
836 227.84 humidity 90.0 90 < th dose independent rect. 3 8
890 227.94 wind 1.0 90 > th dose independent rect. 4 10
915 227.99 humidity 90.0 10 < th dose dependent rect. 24 10
926 228.01 humidity 90.0 10 < th dose dependent rect. 2 8
933 228.03 wind 1.0 90 < th dose independent rect. 4 1
934 228.03 wind 1.0 90 < th dose independent rect. 1 4
966 228.12 humidity 90.0 720 < th dose dependent rect. 24 8
992 228.15 precipitation 0.1 270 < th dose independent rect. 8 22
993 228.15 wind 1.0 90 < th dose dependent sin 1 NA
995 228.15 precipitation 0.1 270 < th dose dependent rect. 8 22
996 228.17 radiation 10.0 10 < th dose independent rect. 7 17