BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0651300 Os01g0651300|AK111325
(178 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G45910.1 | chr5:18620420-18622264 REVERSE LENGTH=373 77 5e-15
AT2G27360.1 | chr2:11706233-11707905 FORWARD LENGTH=395 70 9e-13
AT3G48460.1 | chr3:17949496-17951082 FORWARD LENGTH=382 70 9e-13
AT1G31550.2 | chr1:11295635-11297284 REVERSE LENGTH=395 69 1e-12
AT1G28650.1 | chr1:10069547-10071082 REVERSE LENGTH=386 69 1e-12
AT1G28590.1 | chr1:10047509-10049300 REVERSE LENGTH=404 67 3e-12
AT1G28640.1 | chr1:10067563-10069109 REVERSE LENGTH=390 67 6e-12
AT1G28670.1 | chr1:10074669-10076250 REVERSE LENGTH=385 67 7e-12
AT1G28600.1 | chr1:10051228-10053073 REVERSE LENGTH=394 65 1e-11
AT1G28580.1 | chr1:10044603-10046379 REVERSE LENGTH=391 64 3e-11
AT1G28660.1 | chr1:10071856-10073371 REVERSE LENGTH=384 64 4e-11
AT1G53920.1 | chr1:20137725-20139637 FORWARD LENGTH=386 64 6e-11
AT1G28570.1 | chr1:10041838-10044112 REVERSE LENGTH=390 63 7e-11
AT1G28610.2 | chr1:10053877-10055665 REVERSE LENGTH=384 62 1e-10
AT5G14450.1 | chr5:4658488-4660034 FORWARD LENGTH=390 61 4e-10
AT3G26430.1 | chr3:9674419-9675889 FORWARD LENGTH=381 58 2e-09
AT1G67830.1 | chr1:25431705-25432972 REVERSE LENGTH=373 58 2e-09
AT4G01130.1 | chr4:485868-488007 FORWARD LENGTH=383 57 4e-09
AT3G27950.1 | chr3:10378048-10379771 FORWARD LENGTH=362 57 5e-09
AT1G71120.1 | chr1:26821072-26822420 REVERSE LENGTH=363 57 7e-09
AT5G40990.1 | chr5:16418920-16420400 FORWARD LENGTH=375 55 2e-08
AT3G09930.1 | chr3:3053356-3055203 FORWARD LENGTH=355 54 5e-08
AT3G14225.1 | chr3:4734616-4735993 REVERSE LENGTH=378 54 5e-08
AT5G03610.1 | chr5:915650-918326 FORWARD LENGTH=360 53 7e-08
AT1G09390.1 | chr1:3031264-3033415 FORWARD LENGTH=371 52 1e-07
AT5G08460.1 | chr5:2733220-2735351 FORWARD LENGTH=386 52 2e-07
AT1G53940.1 | chr1:20143279-20145780 FORWARD LENGTH=437 51 3e-07
AT1G56670.1 | chr1:21241688-21243965 FORWARD LENGTH=374 50 5e-07
>AT5G45910.1 | chr5:18620420-18622264 REVERSE LENGTH=373
Length = 372
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 31 RPVLGCYSRIFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVI 90
RP L Y IF+FGDSL+DTGN+ L +G S G PYG+TFF R TGR SDGRL+I
Sbjct: 23 RPTLK-YESIFNFGDSLSDTGNF--LLSGDVDSPNIGRLPYGQTFFNRSTGRCSDGRLII 79
Query: 91 DFIGERTELPSV 102
DFI E + LP +
Sbjct: 80 DFIAEASGLPYI 91
>AT2G27360.1 | chr2:11706233-11707905 FORWARD LENGTH=395
Length = 394
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 37 YSRIFSFGDSLTDTGNYVRLTAGRK-PSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGE 95
+ I SFGDS+TDTGN + L++ P S + PPYG TFF P+GR SDGRL+IDFI E
Sbjct: 31 FKSIISFGDSITDTGNLLGLSSPNDLPESAF--PPYGETFFHHPSGRFSDGRLIIDFIAE 88
Query: 96 RTELPSV 102
+P V
Sbjct: 89 FLGIPHV 95
>AT3G48460.1 | chr3:17949496-17951082 FORWARD LENGTH=382
Length = 381
Score = 69.7 bits (169), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 42/69 (60%), Gaps = 11/69 (15%)
Query: 37 YSRIFSFGDSLTDTGNYVRLTAGRKPSSPYG-----APPYGRTFFGRPTGRASDGRLVID 91
+++I++FGDS TDTGN R P G +PPYG TFF RPT R SDGRL ID
Sbjct: 36 FNKIYAFGDSFTDTGN------SRSGEGPAGFGHLSSPPYGMTFFRRPTNRYSDGRLTID 89
Query: 92 FIGERTELP 100
F+ E LP
Sbjct: 90 FVAESMNLP 98
>AT1G31550.2 | chr1:11295635-11297284 REVERSE LENGTH=395
Length = 394
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 37 YSRIFSFGDSLTDTGNYVRLTAGRK-PSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGE 95
+ I SFGDS+ DTGN + L+ P S + PPYG TFF PTGR SDGRL+IDFI E
Sbjct: 34 FESIISFGDSIADTGNLLGLSDHNNLPMSAF--PPYGETFFHHPTGRFSDGRLIIDFIAE 91
Query: 96 RTELPSV 102
LP V
Sbjct: 92 FLGLPYV 98
>AT1G28650.1 | chr1:10069547-10071082 REVERSE LENGTH=386
Length = 385
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 37 YSRIFSFGDSLTDTGNYVRLT-AGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGE 95
Y I SFGDS+ DTGNYV L+ P + + PYG +FF P+GR SDGRLVIDFI E
Sbjct: 35 YKSIISFGDSIADTGNYVHLSNVNNLPQAAF--LPYGESFFHPPSGRYSDGRLVIDFIAE 92
Query: 96 RTELPSV 102
LP V
Sbjct: 93 FLGLPYV 99
>AT1G28590.1 | chr1:10047509-10049300 REVERSE LENGTH=404
Length = 403
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 37 YSRIFSFGDSLTDTGNYVRLTA-GRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGE 95
+ I SFGDS+ DTGN + L+ P+S + PPYG TFF PTGR SDGRL+IDFI E
Sbjct: 34 FKSIISFGDSIADTGNLLGLSDPNDLPASAF--PPYGETFFHHPTGRYSDGRLIIDFIAE 91
Query: 96 RTELPSV 102
P V
Sbjct: 92 FLGFPLV 98
>AT1G28640.1 | chr1:10067563-10069109 REVERSE LENGTH=390
Length = 389
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 37 YSRIFSFGDSLTDTGNYVRLT-AGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGE 95
+ I SFGDS+ DTGNY+ L+ P S + PYG +FF P+GR SDGRL+IDFI E
Sbjct: 33 FKSIISFGDSIADTGNYLHLSDVNHLPQSAF--LPYGESFFHPPSGRYSDGRLIIDFIAE 90
Query: 96 RTELPSV 102
LP V
Sbjct: 91 FLGLPYV 97
>AT1G28670.1 | chr1:10074669-10076250 REVERSE LENGTH=385
Length = 384
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 37 YSRIFSFGDSLTDTGNYVRLT-AGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGE 95
+ I SFGDS+ DTGNY+ L+ P S + PYG +FF P+GRAS+GRL+IDFI E
Sbjct: 33 FKSIISFGDSIADTGNYLHLSDVNHLPQSAF--LPYGESFFHPPSGRASNGRLIIDFIAE 90
Query: 96 RTELPSV 102
LP V
Sbjct: 91 FLGLPYV 97
>AT1G28600.1 | chr1:10051228-10053073 REVERSE LENGTH=394
Length = 393
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 37 YSRIFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGER 96
+ I SFGDS+ DTGN V L+ R PPYG TFF PTGR+ DGR+++DFI E
Sbjct: 29 FKSIISFGDSIADTGNLVGLS-DRNQLPVTAFPPYGETFFHHPTGRSCDGRIIMDFIAEF 87
Query: 97 TELPSV 102
LP V
Sbjct: 88 VGLPYV 93
>AT1G28580.1 | chr1:10044603-10046379 REVERSE LENGTH=391
Length = 390
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 37 YSRIFSFGDSLTDTGNYVRLTAGRKPSSPYGA-PPYGRTFFGRPTGRASDGRLVIDFIGE 95
+ I SFGDS+ DTGN + L+ + P+ A PPYG FF PTGR S+GRL+IDFI E
Sbjct: 35 FKSIISFGDSIADTGNLLGLSDPK--DLPHMAFPPYGENFFHHPTGRFSNGRLIIDFIAE 92
Query: 96 RTELPSV 102
LP V
Sbjct: 93 FLGLPLV 99
>AT1G28660.1 | chr1:10071856-10073371 REVERSE LENGTH=384
Length = 383
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 37 YSRIFSFGDSLTDTGNYVRLT-AGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGE 95
++ I SFGDS+ DTGN + L+ P + + PYG +FF P+GRASDGRL+IDFI E
Sbjct: 33 FTSIISFGDSIADTGNILHLSDVNHLPQTAFF--PYGESFFHPPSGRASDGRLIIDFIAE 90
Query: 96 RTELPSV 102
LP V
Sbjct: 91 FLGLPYV 97
>AT1G53920.1 | chr1:20137725-20139637 FORWARD LENGTH=386
Length = 385
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 40 IFSFGDSLTDTGN--YVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGERT 97
+F FGDS D GN Y+ T + + PPYG+TFFG PTGR SDGRL+ DFI E
Sbjct: 49 LFLFGDSFLDAGNNNYINTTTLDQAN----FPPYGQTFFGLPTGRFSDGRLISDFIAEYA 104
Query: 98 ELPSV 102
LP +
Sbjct: 105 NLPLI 109
>AT1G28570.1 | chr1:10041838-10044112 REVERSE LENGTH=390
Length = 389
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 30 SRPVLGCYSRIFSFGDSLTDTGNYVRLTAGRKPSSPYGAP-----PYGRTFFGRPTGRAS 84
S P + I SFGDS+ DTGN + L S P P PYG TFF PTGR S
Sbjct: 25 SEPQCHNFKSIISFGDSIADTGNLLAL------SDPTNLPKVAFLPYGETFFHHPTGRFS 78
Query: 85 DGRLVIDFIGERTELPSV 102
+GRL+IDFI E P V
Sbjct: 79 NGRLIIDFIAEFLGFPLV 96
>AT1G28610.2 | chr1:10053877-10055665 REVERSE LENGTH=384
Length = 383
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 40 IFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGERTEL 99
I SFGDS+TDTGN V L + R PYG TFF PTGR+ +GR++IDFI E L
Sbjct: 32 IISFGDSITDTGNLVGL-SDRNHLPVTAFLPYGETFFHHPTGRSCNGRIIIDFIAEFLGL 90
Query: 100 PSV 102
P V
Sbjct: 91 PHV 93
>AT5G14450.1 | chr5:4658488-4660034 FORWARD LENGTH=390
Length = 389
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 40/61 (65%), Gaps = 7/61 (11%)
Query: 40 IFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGERTEL 99
I++FGDS +DTG ++A +P PYG+ FF RPTGR SDGRL IDFI ER L
Sbjct: 42 IYNFGDSNSDTGG---ISAAFEPIRD----PYGQGFFHRPTGRDSDGRLTIDFIAERLGL 94
Query: 100 P 100
P
Sbjct: 95 P 95
>AT3G26430.1 | chr3:9674419-9675889 FORWARD LENGTH=381
Length = 380
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 11/63 (17%)
Query: 40 IFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPY--GRTFFGRPTGRASDGRLVIDFIGERT 97
IF+FGDS +DTG S+ +G PY G+TFF P+GR SDGRL+IDFI E
Sbjct: 32 IFNFGDSNSDTGGL---------SASFGQAPYPNGQTFFHSPSGRFSDGRLIIDFIAEEL 82
Query: 98 ELP 100
LP
Sbjct: 83 GLP 85
>AT1G67830.1 | chr1:25431705-25432972 REVERSE LENGTH=373
Length = 372
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 40 IFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGERTEL 99
IF+FGDS +DTG G + PP+G +FFG P GR DGRLVIDFI E L
Sbjct: 31 IFNFGDSNSDTG-------GLSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGL 83
Query: 100 P 100
P
Sbjct: 84 P 84
>AT4G01130.1 | chr4:485868-488007 FORWARD LENGTH=383
Length = 382
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Query: 37 YSRIFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGER 96
+ IF+FGDS +DTG G + P + P+G T+F +P GRASDGRL+IDF+ +
Sbjct: 32 FEAIFNFGDSNSDTG-------GFWAAFPAQSGPWGMTYFKKPAGRASDGRLIIDFLAKS 84
Query: 97 TELP 100
+P
Sbjct: 85 LGMP 88
>AT3G27950.1 | chr3:10378048-10379771 FORWARD LENGTH=362
Length = 361
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 40 IFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGERTEL 99
+F+FGDS +DTG + G P PP G FFGR GR SDGRL+IDFI E L
Sbjct: 33 VFNFGDSNSDTG-AISAAIGEVP------PPNGVAFFGRSAGRHSDGRLIIDFITENLTL 85
Query: 100 P 100
P
Sbjct: 86 P 86
>AT1G71120.1 | chr1:26821072-26822420 REVERSE LENGTH=363
Length = 362
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 40 IFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGERTEL 99
IF+FGDS+ D GN + ++ PPYG +FF RPTGR ++GR V DFI E L
Sbjct: 32 IFTFGDSIFDAGNN---HYNKNCTAQADFPPYGSSFFHRPTGRFTNGRTVADFISEFVGL 88
Query: 100 PSVWFQHAFPCSDVSICPCSHHLCVAFALCSVHPSVFLPTTTY 142
P Q F + I + + S + L T +
Sbjct: 89 P---LQKPFLELQIQILNGTSNFSNGINFASAGSGLLLDTNKF 128
>AT5G40990.1 | chr5:16418920-16420400 FORWARD LENGTH=375
Length = 374
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 38 SRIFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGERT 97
S +F FGDS+ D GN + S Y PYG+T F PTGR SDGRL+ DFI E
Sbjct: 36 SALFVFGDSVFDAGNNNYIDTLSSVRSNYW--PYGQTTFKSPTGRVSDGRLIPDFIAEYA 93
Query: 98 ELPSV 102
LP +
Sbjct: 94 WLPLI 98
>AT3G09930.1 | chr3:3053356-3055203 FORWARD LENGTH=355
Length = 354
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 38 SRIFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDF----I 93
+R+F FGDS DTGN RK S PYG TF +P+GR SDGR+ DF +
Sbjct: 38 NRLFVFGDSYADTGNI------RKSLSDSWKIPYGITFPQKPSGRFSDGRVATDFLARYL 91
Query: 94 GERTELPSVWFQHA 107
G ++ +P W +A
Sbjct: 92 GIKSPIPYTWKDYA 105
>AT3G14225.1 | chr3:4734616-4735993 REVERSE LENGTH=378
Length = 377
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 40 IFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGERTEL 99
+F+FGDSL + GN + S + PYG+T F PTGR SDGR++IDFI E L
Sbjct: 38 LFAFGDSLFEAGNNNYFDSISSFRSNFW--PYGKTTFKFPTGRVSDGRIMIDFIAEYAWL 95
Query: 100 PSV 102
P +
Sbjct: 96 PLI 98
>AT5G03610.1 | chr5:915650-918326 FORWARD LENGTH=360
Length = 359
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 10/74 (13%)
Query: 38 SRIFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVID----FI 93
+++F FGDS DTGN +K S PYG TF G+P GR SDGR+ D F+
Sbjct: 42 TKLFVFGDSYADTGNI------KKAFSSSWKFPYGITFPGKPAGRFSDGRVATDFLAKFV 95
Query: 94 GERTELPSVWFQHA 107
G ++ +P W +A
Sbjct: 96 GIKSPIPYFWKDYA 109
>AT1G09390.1 | chr1:3031264-3033415 FORWARD LENGTH=371
Length = 370
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 40 IFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFI 93
IF+FGDS +DTG L AG S P GR+FF R TGR SDGRLVIDF+
Sbjct: 38 IFNFGDSNSDTGG---LVAGLGYSI---GLPNGRSFFQRSTGRLSDGRLVIDFL 85
>AT5G08460.1 | chr5:2733220-2735351 FORWARD LENGTH=386
Length = 385
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 40 IFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFG-RPTGRASDGRLVIDFIGERTE 98
+F FGDSL D GN L + + S Y PYG F G +PTGR S+G+ ++DFIGE
Sbjct: 50 MFVFGDSLVDNGNNNHLNSLAR--SNY--LPYGIDFAGNQPTGRFSNGKTIVDFIGELLG 105
Query: 99 LPSV 102
LP +
Sbjct: 106 LPEI 109
>AT1G53940.1 | chr1:20143279-20145780 FORWARD LENGTH=437
Length = 436
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 38 SRIFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLVIDFIGERT 97
S +F FGDS+ D GN + PS PYG+T F PTGR SDGR + DFI E
Sbjct: 38 SALFVFGDSVFDAGNNNYIDT--LPSFRSNYWPYGQTTFKFPTGRVSDGRTIPDFIAEYA 95
Query: 98 ELPSV 102
LP +
Sbjct: 96 WLPLI 100
>AT1G56670.1 | chr1:21241688-21243965 FORWARD LENGTH=374
Length = 373
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 39/64 (60%), Gaps = 12/64 (18%)
Query: 30 SRPVLGCYSRIFSFGDSLTDTGNYVRLTAGRKPSSPYGAPPYGRTFFGRPTGRASDGRLV 89
+RPV IF+FGDS +DTG L AG P G P GR FF R TGR SDGRL+
Sbjct: 37 ARPV------IFNFGDSNSDTGG---LVAGL--GYPIGFPN-GRLFFRRSTGRLSDGRLL 84
Query: 90 IDFI 93
IDF+
Sbjct: 85 IDFL 88
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.138 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,793,432
Number of extensions: 157984
Number of successful extensions: 542
Number of sequences better than 1.0e-05: 29
Number of HSP's gapped: 574
Number of HSP's successfully gapped: 29
Length of query: 178
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 86
Effective length of database: 8,584,297
Effective search space: 738249542
Effective search space used: 738249542
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 108 (46.2 bits)