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Os01g0647100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ADP/ATP carrier protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0161) R2 : 0.0671
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.195 (0.034) R2dN8 : 0.0866 R2N8 : 0.0671
σ : 0.304
deviance : 42.39
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.78 0.252 11.3 0.509 0.238 -0.88 -0.386 1.77 0.418 11.5 20.41 14 -- --
30.98 0.259 11.4 0.185 0.232 -0.764 0.03 -- 0.324 11 20.3 2 -- --
29.31 0.252 11.3 0.456 0.239 -0.859 -- 1.5 0.418 11.2 20.3 14 -- --
30.98 0.259 11.4 0.187 0.231 -0.763 -- -- 0.323 11 20.27 2 -- --
31.63 0.262 11.3 0.405 -- -0.695 -- 1.38 0.369 -- 20.33 89 -- --
39.75 0.296 11.4 0.0273 0.223 -- 0.0475 -- 0.193 5.86 -- -- -- --
39.76 0.295 11.4 0.0276 0.224 -- -- -- 0.193 5.87 -- -- -- --
33.31 0.269 11.4 0.158 -- -0.585 -- -- 0.303 -- 22.37 81 -- --
31.86 0.263 11.4 -- 0.217 -0.725 -- -- 0.306 10.9 20.2 2 -- --
42.35 0.304 11.4 0.0344 -- -- -- -- 0.198 -- -- -- -- --
39.78 0.295 11.4 -- 0.224 -- -- -- 0.19 5.86 -- -- -- --
33.81 0.271 11.4 -- -- -0.562 -- -- 0.257 -- 23.37 69 -- --
42.39 0.304 11.4 -- -- -- -- -- 0.195 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.49 temperature 20 10 > th dose dependent rect. 6 18
3 25.53 temperature 20 10 > th dose dependent rect. 6 16
18 26.00 temperature 10 720 > th dose dependent rect. 5 6
19 26.04 temperature 20 10 > th dose dependent rect. 6 20
50 26.48 temperature 30 720 < th dose dependent rect. 3 10
51 26.51 temperature 30 720 < th dose dependent rect. 1 13
92 26.82 temperature 10 720 > th dose dependent rect. 23 17
107 26.92 temperature 10 720 > th dose dependent sin 4 NA
113 26.97 temperature 30 10 < th dose dependent rect. 10 8
114 26.98 temperature 30 720 < th dose dependent sin 4 NA
169 27.23 temperature 15 720 > th dose dependent rect. 1 15
183 27.30 temperature 30 270 < th dose dependent rect. 9 8
188 27.32 temperature 30 30 < th dose dependent sin 22 NA
192 27.33 temperature 10 720 > th dose dependent rect. 5 10
249 27.51 temperature 15 30 > th dose dependent sin 22 NA
440 28.08 temperature 15 720 > th dose dependent rect. 23 12
466 28.16 temperature 20 720 > th dose independent rect. 4 7
551 28.37 temperature 30 720 < th dose dependent rect. 9 3
599 28.49 temperature 20 10 > th dose dependent rect. 3 23
627 28.56 temperature 20 10 > th dose dependent rect. 1 23
629 28.56 temperature 20 10 > th dose dependent rect. 23 23
659 28.63 temperature 25 90 > th dose independent rect. 6 14
742 28.84 temperature 25 90 < th dose independent rect. 10 9
743 28.84 temperature 20 10 > th dose dependent no NA NA
756 28.87 temperature 30 10 < th dose dependent rect. 9 21
817 28.99 temperature 30 30 < th dose dependent rect. 19 23
836 29.02 temperature 30 10 < th dose dependent rect. 11 23
872 29.08 temperature 30 720 < th dose dependent rect. 11 1
933 29.14 temperature 30 90 < th dose dependent rect. 7 23
945 29.17 temperature 20 720 < th dose independent rect. 4 9
979 29.23 temperature 30 10 < th dose dependent no NA NA
986 29.23 temperature 30 90 < th dose dependent rect. 23 23