BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0647100 Os01g0647100|AK069624
         (642 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G15500.1  | chr1:5326426-5328688 FORWARD LENGTH=619            730   0.0  
AT1G80300.1  | chr1:30191954-30194280 FORWARD LENGTH=625          730   0.0  

>AT1G15500.1 | chr1:5326426-5328688 FORWARD LENGTH=619
          Length = 618

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/478 (76%), Positives = 396/478 (82%), Gaps = 5/478 (1%)

Query: 110 KFLGVEVKTLKKIVPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPM 169
           K  GVEV TLKKIVPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPM
Sbjct: 101 KIFGVEVTTLKKIVPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPM 160

Query: 170 AIGFMLLYTKLSNVLSREALFYTVXXXXXXXXXXXXXVLYPLRNVIHPTALADKLLAALG 229
           AIGFMLLYTKLSNVLS++ALFYTV             V+YPL N+IHP ALADKLLA LG
Sbjct: 161 AIGFMLLYTKLSNVLSKKALFYTVIVPFIVYFGAFGFVMYPLSNLIHPEALADKLLATLG 220

Query: 230 PSFLGPVAILRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVEEAKEFYPLFGLGANI 289
           P F+GP+AI+RIWSFCLFYVMAELWGSVV+SVLFWGFANQITTV+EAK+FYPLFGLGAN+
Sbjct: 221 PRFMGPLAIMRIWSFCLFYVMAELWGSVVVSVLFWGFANQITTVDEAKKFYPLFGLGANV 280

Query: 290 ALIFSGRTVKYFSNLRKTLGPGIDGWEXXXXXXXXXXXXXXXXITSIYWGVNKFVLNXXX 349
           ALIFSGRTVKYFSN+RK LGPG+DGW                 I  +YW VN++V     
Sbjct: 281 ALIFSGRTVKYFSNMRKNLGPGVDGWAVSLKAMMSIVVGMGLAICFLYWWVNRYV----- 335

Query: 350 XXXXXXXXXXXXXXXGMKESLKVLLSSRYVRDLATLVVAYGISINLVEVTWKSKLKAQFP 409
                          G  ESLK L+SS Y+RDLATLVVAYGISINLVEVTWKSKLKAQFP
Sbjct: 336 PLPTRSKKKKVKPQMGTMESLKFLVSSPYIRDLATLVVAYGISINLVEVTWKSKLKAQFP 395

Query: 410 SPNEYSSFMGDFSTATGIATFTMMLLGRIILRKFGWGVAAMITPTVLLLTGVGFFSLILF 469
           SPNEYS+FMGDFST TGIATFTMMLL + + +K+GWGVAA ITPTVLLLTGV FFSLILF
Sbjct: 396 SPNEYSAFMGDFSTCTGIATFTMMLLSQYVFKKYGWGVAAKITPTVLLLTGVAFFSLILF 455

Query: 470 GQPLTPMLATMGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAA 529
           G P  P++A +GMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDED KVKGKAA
Sbjct: 456 GGPFAPLVAKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAA 515

Query: 530 IDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAASSLDKQFSS 587
           IDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLG ILL IV AWL AA SL+ QF++
Sbjct: 516 IDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGVILLGIVTAWLAAAKSLEGQFNT 573



>AT1G80300.1 | chr1:30191954-30194280 FORWARD LENGTH=625
          Length = 624

 Score =  730 bits (1885), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/479 (76%), Positives = 395/479 (82%), Gaps = 5/479 (1%)

Query: 110 KFLGVEVKTLKKIVPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPM 169
           K  GVEV TLKKI+PLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPM
Sbjct: 104 KIFGVEVATLKKIIPLGLMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPM 163

Query: 170 AIGFMLLYTKLSNVLSREALFYTVXXXXXXXXXXXXXVLYPLRNVIHPTALADKLLAALG 229
           AIGFMLLYTKLSNVLS++ALFYTV             V+YPL N IHP ALADKLL  LG
Sbjct: 164 AIGFMLLYTKLSNVLSKKALFYTVIVPFIIYFGAFGFVMYPLSNYIHPEALADKLLTTLG 223

Query: 230 PSFLGPVAILRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVEEAKEFYPLFGLGANI 289
           P F+GP+AILRIWSFCLFYVMAELWGSVV+SVLFWGFANQITTV+EAK+FYPLFGLGAN+
Sbjct: 224 PRFMGPIAILRIWSFCLFYVMAELWGSVVVSVLFWGFANQITTVDEAKKFYPLFGLGANV 283

Query: 290 ALIFSGRTVKYFSNLRKTLGPGIDGWEXXXXXXXXXXXXXXXXITSIYWGVNKFVLNXXX 349
           ALIFSGRTVKYFSNLRK LGPG+DGW                 I  +YW VN++V     
Sbjct: 284 ALIFSGRTVKYFSNLRKNLGPGVDGWAVSLKAMMSIVVGMGLAICLLYWWVNRYV----- 338

Query: 350 XXXXXXXXXXXXXXXGMKESLKVLLSSRYVRDLATLVVAYGISINLVEVTWKSKLKAQFP 409
                          G  ESLK L+SS Y+RDLATLVVAYGISINLVEVTWKSKLKAQFP
Sbjct: 339 PLPTRSKNKKEKPKMGTMESLKFLVSSPYIRDLATLVVAYGISINLVEVTWKSKLKAQFP 398

Query: 410 SPNEYSSFMGDFSTATGIATFTMMLLGRIILRKFGWGVAAMITPTVLLLTGVGFFSLILF 469
           SPNEYS+FMGDFST TG+ATFTMMLL + +  K+GWGVAA ITPTVLLLTGV FFSLILF
Sbjct: 399 SPNEYSAFMGDFSTCTGVATFTMMLLSQYVFNKYGWGVAAKITPTVLLLTGVAFFSLILF 458

Query: 470 GQPLTPMLATMGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDMKVKGKAA 529
           G P  P++A +GMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDED KVKGKAA
Sbjct: 459 GGPFAPLVAKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAA 518

Query: 530 IDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAASSLDKQFSSL 588
           IDVVCNPLGKSGGALIQQFMIL+FGSLANSTPYLG ILLVIV AWL AA SL+ QF+SL
Sbjct: 519 IDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSL 577



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.324    0.139    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,571,462
Number of extensions: 339034
Number of successful extensions: 768
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 766
Number of HSP's successfully gapped: 2
Length of query: 642
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 537
Effective length of database: 8,227,889
Effective search space: 4418376393
Effective search space used: 4418376393
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 115 (48.9 bits)