Os01g0647000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0647000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.32 | 0.431 | 12.2 | 1.18 | 1.15 | -0.667 | -0.581 | 1.54 | 0.57 | 4.66 | 27.44 | 1303 | -- | -- |
| 88.27 | 0.438 | 12.2 | 1.36 | 1.13 | -0.648 | -0.809 | -- | 0.606 | 4.45 | 18.4 | 1362 | -- | -- |
| 85.15 | 0.43 | 12.2 | 1.18 | 1.15 | -0.683 | -- | 1.6 | 0.567 | 4.77 | 25.32 | 1302 | -- | -- |
| 89.64 | 0.441 | 12.2 | 1.36 | 1.14 | -0.648 | -- | -- | 0.637 | 4.74 | 18.35 | 1327 | -- | -- |
| 150.93 | 0.575 | 12.2 | 1.47 | -- | 0.57 | -- | -1.03 | 0.808 | -- | 31.47 | 1322 | -- | -- |
| 99.19 | 0.467 | 12.2 | 1.45 | 1.18 | -- | -0.772 | -- | 0.779 | 4.11 | -- | -- | -- | -- |
| 100.82 | 0.47 | 12.1 | 1.46 | 1.17 | -- | -- | -- | 0.784 | 4.22 | -- | -- | -- | -- |
| 155.5 | 0.583 | 12.2 | 1.51 | -- | 0.555 | -- | -- | 0.811 | -- | 31.47 | 1322 | -- | -- |
| 138.03 | 0.547 | 12.2 | -- | 1.15 | -0.767 | -- | -- | 0.477 | 4.55 | 33.68 | 1360 | -- | -- |
| 175.33 | 0.619 | 12.2 | 1.5 | -- | -- | -- | -- | 0.815 | -- | -- | -- | -- | -- |
| 156.65 | 0.585 | 12.2 | -- | 1.2 | -- | -- | -- | 0.621 | 4.19 | -- | -- | -- | -- |
| 207.13 | 0.67 | 12.2 | -- | -- | -0.866 | -- | -- | 0.467 | -- | 32.73 | 1359 | -- | -- |
| 234.88 | 0.715 | 12.2 | -- | -- | -- | -- | -- | 0.648 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.75 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 17 | 16 |
| 2 | 81.07 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 7 | 81.69 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 11 | 82.23 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 4 |
| 19 | 82.63 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 15 | 16 |
| 20 | 82.63 | radiation | 1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 29 | 83.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 57 | 83.57 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 6 |
| 58 | 83.66 | radiation | 40 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 64 | 83.83 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 69 | 83.87 | wind | 9 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 77 | 83.96 | radiation | 20 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 80 | 84.00 | wind | 9 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 81 | 84.02 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 7 |
| 84 | 84.06 | temperature | 20 | 90 | > th | dose independent | rect. | 11 | 15 |
| 107 | 84.27 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 16 |
| 109 | 84.31 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 7 |
| 111 | 84.32 | wind | 9 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 113 | 84.36 | radiation | 40 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 125 | 84.51 | radiation | 20 | 1440 | < th | dose independent | rect. | 12 | 4 |
| 136 | 84.60 | radiation | 40 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 137 | 84.60 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 7 |
| 152 | 84.69 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 21 | 6 |
| 157 | 84.69 | radiation | 10 | 1440 | > th | dose dependent | rect. | 12 | 21 |
| 165 | 84.73 | wind | 9 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 169 | 84.75 | radiation | 20 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 170 | 84.75 | radiation | 20 | 1440 | > th | dose independent | rect. | 12 | 4 |
| 176 | 84.78 | radiation | 20 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 182 | 84.83 | radiation | 1 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 195 | 84.86 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 3 |
| 210 | 84.91 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 219 | 84.95 | radiation | 30 | 1440 | < th | dose dependent | rect. | 12 | 21 |
| 244 | 85.02 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 3 |
| 254 | 85.06 | radiation | 40 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 262 | 85.08 | radiation | 40 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 282 | 85.11 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 284 | 85.11 | radiation | 40 | 1440 | < th | dose dependent | rect. | 12 | 11 |
| 299 | 85.17 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 303 | 85.19 | wind | 9 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 305 | 85.20 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 1 |
| 328 | 85.25 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 344 | 85.28 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 345 | 85.29 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 21 | 1 |
| 370 | 85.32 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 396 | 85.37 | radiation | 30 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 411 | 85.41 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 428 | 85.44 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 11 |
| 494 | 85.60 | radiation | 20 | 1440 | < th | dose independent | rect. | 12 | 15 |
| 495 | 85.60 | radiation | 20 | 1440 | < th | dose independent | rect. | 12 | 17 |
| 523 | 85.61 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 17 | 16 |
| 525 | 85.62 | radiation | 20 | 1440 | < th | dose independent | rect. | 12 | 12 |
| 545 | 85.63 | wind | 9 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 551 | 85.65 | radiation | 30 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 585 | 85.69 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 6 |
| 592 | 85.70 | radiation | 20 | 1440 | < th | dose dependent | sin | 21 | NA |
| 611 | 85.72 | radiation | 20 | 1440 | < th | dose independent | rect. | 12 | 21 |
| 678 | 85.81 | radiation | 20 | 1440 | > th | dose independent | sin | 20 | NA |
| 700 | 85.85 | radiation | 30 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 732 | 85.93 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 16 |
| 733 | 85.93 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 21 |
| 734 | 85.93 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 736 | 85.93 | radiation | 20 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 741 | 85.94 | radiation | 20 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 766 | 85.94 | radiation | 20 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 840 | 86.00 | radiation | 20 | 1440 | > th | dose independent | no | NA | NA |
| 843 | 86.00 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 18 | 7 |
| 983 | 86.04 | atmosphere | 1005 | 270 | > th | dose independent | sin | 12 | NA |