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Os01g0645900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.67 (0.0357) R2 : 0.901
β1 : -- (--) R2dD : -- R2D : --
β2 : 6.26 (0.0983) R2dC : 1.1 R2C : 0.585
β3 : -3.93 (0.115) R2dE : 0.316 R2E : -0.199
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.221 (0.0753) R2dN8 : 0.00211 R2N8 : -0.00332
σ : 0.67
deviance : 207.21
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C
peak time of C : 14.7
E
wheather : temperature
threshold : 9.679
memory length : 363
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.25
open length of G : 7.55

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
204.72 0.672 8.69 0.281 6.15 -3.28 1.16 -1.84 0.232 15.1 13.02 299 3.97 7.2
208.27 0.672 8.68 0.356 6.16 -3.28 0.595 -- 0.266 15.1 12.77 318 3.97 7.05
207 0.67 8.68 0.32 6.2 -3.28 -- -1.16 0.233 15.1 12.64 310 3.9 7.22
204.81 0.667 8.7 0.374 6.27 -3.98 -- -- 0.275 14.8 10.08 381 3.23 7.35
1056.35 1.51 8.6 1.2 -- -3.64 -- 0.43 0.704 -- -12.54 38 0.0166 10.8
321.14 0.84 8.78 0.134 5.75 -- 0.738 -- 0.054 16.6 -- -- -- --
322.58 0.841 8.78 0.139 5.75 -- -- -- 0.0579 16.6 -- -- -- --
1032.55 1.5 8.58 0.522 -- -3.68 -- -- 0.421 -- -7.407 30 0.0163 10.8
207.21 0.67 8.67 -- 6.26 -3.93 -- -- 0.221 14.7 9.679 363 3.25 7.55
2083.04 2.13 8.74 -0.0821 -- -- -- -- -0.0929 -- -- -- -- --
323.09 0.841 8.79 -- 5.75 -- -- -- 0.0424 16.6 -- -- -- --
1013.64 1.48 8.67 -- -- -3.75 -- -- 0.402 -- -17.96 23 0.0166 10.9
2083.22 2.13 8.73 -- -- -- -- -- -0.0838 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 208.58 temperature 15.0 270 > th dose dependent rect. 4 7
37 234.63 humidity 60.0 270 > th dose independent rect. 17 18
40 235.17 radiation 20.0 270 < th dose dependent rect. 15 8
46 235.65 temperature 25.0 270 > th dose independent rect. 6 5
64 237.72 temperature 30.0 270 < th dose independent rect. 16 7
68 237.89 humidity 70.0 270 > th dose independent rect. 16 6
74 238.41 radiation 10.0 270 < th dose independent rect. 15 8
87 239.54 radiation 1.0 270 > th dose independent rect. 10 19
90 239.82 radiation 1.0 270 > th dose independent rect. 10 9
100 239.82 radiation 10.0 270 < th dose dependent rect. 6 16
106 240.15 humidity 50.0 270 > th dose independent rect. 16 7
109 240.31 radiation 10.0 270 < th dose dependent sin 19 NA
118 240.60 temperature 30.0 270 < th dose independent rect. 17 5
158 242.45 temperature 20.0 10 > th dose dependent rect. 7 6
163 242.73 humidity 50.0 270 > th dose dependent rect. 16 6
168 242.96 radiation 1.0 270 < th dose independent sin 20 NA
195 244.00 atmosphere 995.0 270 > th dose independent rect. 16 7
198 244.08 temperature 30.0 270 < th dose independent rect. 17 17
236 245.14 radiation 1.0 270 > th dose independent sin 20 NA
239 245.24 wind 9.0 270 < th dose independent rect. 16 7
240 245.25 temperature 10.0 270 > th dose independent rect. 16 7
242 245.25 temperature 10.0 270 > th dose independent rect. 23 17
248 245.42 wind 9.0 270 < th dose independent rect. 23 17
287 246.09 radiation 1.0 270 < th dose dependent rect. 22 11
290 246.16 atmosphere 1015.0 270 < th dose independent rect. 23 17
293 246.24 atmosphere 995.0 270 > th dose independent rect. 17 17
302 246.50 radiation 1.0 270 < th dose dependent rect. 22 9
312 246.73 radiation 1.0 270 < th dose dependent rect. 22 15
319 246.97 radiation 1.0 270 < th dose independent rect. 22 9
323 247.08 humidity 90.0 270 < th dose independent rect. 11 6
333 247.24 wind 1.0 270 > th dose independent rect. 17 6
336 247.28 precipitation 0.1 270 < th dose independent rect. 10 7
337 247.28 precipitation 0.1 270 < th dose dependent rect. 10 7
361 247.85 precipitation 0.1 270 < th dose independent rect. 23 18
362 247.85 precipitation 0.1 270 < th dose dependent rect. 23 18
365 247.90 radiation 1.0 270 < th dose independent rect. 22 11
366 247.90 wind 9.0 270 < th dose independent rect. 17 17
369 247.94 temperature 10.0 270 > th dose independent rect. 10 7
370 247.94 atmosphere 1015.0 270 < th dose independent rect. 10 7
371 247.94 temperature 10.0 270 > th dose independent rect. 17 17
383 248.14 humidity 50.0 270 > th dose independent rect. 6 16
386 248.17 atmosphere 995.0 270 > th dose independent rect. 23 17
411 248.39 radiation 1.0 270 < th dose independent rect. 22 15
412 248.41 wind 1.0 270 > th dose independent rect. 10 7
417 248.53 wind 9.0 270 < th dose independent rect. 10 7
443 249.08 precipitation 0.1 270 < th dose independent rect. 17 17
445 249.08 precipitation 0.1 270 < th dose dependent rect. 17 17
456 249.25 radiation 40.0 270 < th dose independent rect. 17 17
460 249.31 radiation 40.0 270 < th dose independent rect. 18 15
474 249.56 humidity 60.0 270 > th dose independent rect. 5 6
481 249.62 precipitation 0.1 270 < th dose independent rect. 17 6
482 249.62 precipitation 0.1 270 < th dose dependent rect. 17 6
487 249.70 radiation 1.0 270 > th dose independent rect. 5 6
502 249.83 humidity 50.0 270 > th dose dependent rect. 6 16
511 249.93 humidity 70.0 270 > th dose independent rect. 6 16
548 250.49 humidity 50.0 270 > th dose independent rect. 4 8
574 250.89 temperature 10.0 270 > th dose dependent rect. 18 17
593 251.32 radiation 20.0 270 < th dose dependent rect. 22 8
604 251.43 temperature 10.0 270 > th dose independent rect. 22 8
605 251.43 temperature 30.0 270 < th dose independent rect. 22 8
606 251.43 humidity 50.0 270 > th dose independent rect. 22 8
609 251.43 atmosphere 995.0 270 > th dose independent rect. 22 8
610 251.43 radiation 20.0 270 < th dose independent rect. 22 8
613 251.43 temperature 10.0 270 > th dose independent rect. 6 16
623 251.53 wind 9.0 270 < th dose independent rect. 22 8
731 252.72 atmosphere 1015.0 270 < th dose independent rect. 17 6
756 252.96 precipitation 0.1 270 < th dose independent rect. 5 6
758 252.96 precipitation 0.1 270 < th dose dependent rect. 5 6
761 252.97 wind 9.0 270 < th dose independent rect. 6 16
776 253.10 precipitation 0.1 270 < th dose independent rect. 11 18
777 253.10 precipitation 0.1 270 < th dose dependent rect. 11 18
791 253.20 temperature 10.0 270 > th dose independent rect. 5 6
792 253.20 atmosphere 995.0 270 > th dose independent rect. 5 6
793 253.20 atmosphere 1015.0 270 < th dose independent rect. 5 6
794 253.20 temperature 10.0 270 > th dose independent rect. 11 18
803 253.35 humidity 50.0 270 > th dose dependent rect. 21 9
806 253.37 humidity 70.0 10 > th dose independent rect. 18 6
810 253.45 radiation 1.0 270 > th dose independent sin 8 NA
811 253.45 wind 9.0 270 < th dose independent rect. 5 6
813 253.45 precipitation 0.1 270 < th dose independent rect. 4 8
814 253.45 precipitation 0.1 270 < th dose dependent rect. 4 8
824 253.60 wind 9.0 270 < th dose independent rect. 11 18
831 253.63 precipitation 0.1 270 < th dose independent rect. 12 16
834 253.63 precipitation 0.1 270 < th dose dependent rect. 12 16
844 253.73 atmosphere 1015.0 270 < th dose independent rect. 6 15
855 253.79 atmosphere 995.0 270 > th dose independent rect. 10 7
859 253.83 atmosphere 995.0 270 > th dose dependent rect. 17 5
879 253.99 atmosphere 995.0 270 > th dose independent rect. 6 16
899 254.12 temperature 25.0 10 > th dose dependent rect. 20 17
910 254.25 radiation 1.0 90 < th dose independent sin 16 NA
915 254.26 temperature 10.0 270 > th dose independent rect. 4 8
916 254.26 atmosphere 995.0 270 > th dose independent rect. 4 8
917 254.26 atmosphere 1015.0 270 < th dose independent rect. 4 8
918 254.26 temperature 10.0 270 > th dose independent rect. 12 16
954 254.58 temperature 25.0 90 > th dose dependent rect. 20 17
957 254.63 wind 9.0 270 < th dose independent rect. 4 8
972 254.79 wind 9.0 270 < th dose independent rect. 12 16
997 254.96 radiation 1.0 270 < th dose dependent sin 8 NA