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Os01g0639900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 15.5 (0.0297) R2 : 0.343
β1 : -0.989 (0.109) R2dD : 0.124 R2D : -0.0332
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.884 (0.0634) R2dN8 : 0.376 R2N8 : 0.219
σ : 0.557
deviance : 142.12
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
114.91 0.504 15.4 -0.722 0.343 0.623 0.824 1.86 -0.817 11 1008 10145 -- --
121.58 0.514 15.4 -0.928 0.323 0.752 0.903 -- -0.774 10.4 1007 11663 -- --
115.87 0.501 15.4 -0.629 0.33 0.636 -- 2.27 -0.784 11.3 1007 8630 -- --
122.53 0.516 15.4 -1.07 0.31 0.864 -- -- -0.731 10.5 1005 12162 -- --
122.94 0.516 15.4 -0.666 -- 0.605 -- 2.14 -0.786 -- 1007 8648 -- --
132.91 0.54 15.5 -1.02 0.329 -- 0.811 -- -0.885 10.6 -- -- -- --
135.61 0.545 15.5 -0.982 0.325 -- -- -- -0.882 10.7 -- -- -- --
128.49 0.528 15.4 -1.08 -- 0.827 -- -- -0.76 -- 1005 12173 -- --
152.26 0.575 15.4 -- 0.352 0.665 -- -- -0.66 10.8 1005 12162 -- --
142.12 0.557 15.5 -0.989 -- -- -- -- -0.884 -- -- -- -- --
161.05 0.594 15.4 -- 0.332 -- -- -- -0.773 10.9 -- -- -- --
158.7 0.587 15.4 -- -- 0.677 -- -- -0.651 -- 1005 12302 -- --
167.91 0.605 15.4 -- -- -- -- -- -0.774 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 113.86 radiation 10.0 14400 > th dose independent rect. 12 2
5 114.46 wind 9.0 43200 < th dose independent rect. 18 1
6 114.60 wind 9.0 43200 > th dose dependent rect. 18 2
9 114.81 radiation 10.0 14400 < th dose independent rect. 11 1
10 114.86 wind 9.0 43200 > th dose independent rect. 18 1
14 115.06 radiation 10.0 14400 < th dose independent rect. 11 3
23 115.43 radiation 20.0 14400 < th dose dependent rect. 13 1
24 115.50 precipitation 0.1 43200 > th dose dependent rect. 2 2
25 115.53 radiation 40.0 14400 > th dose dependent rect. 14 19
26 115.62 radiation 40.0 14400 > th dose dependent rect. 14 1
50 115.86 radiation 10.0 14400 < th dose dependent rect. 11 4
54 115.92 radiation 10.0 43200 > th dose independent rect. 5 1
68 115.93 temperature 25.0 14400 > th dose dependent rect. 24 3
84 116.17 precipitation 0.1 43200 > th dose dependent rect. 13 1
85 116.21 precipitation 0.1 43200 > th dose dependent rect. 13 4
86 116.22 precipitation 0.1 43200 < th dose independent rect. 2 2
87 116.22 precipitation 0.1 43200 < th dose dependent rect. 2 2
90 116.27 radiation 10.0 14400 > th dose independent rect. 11 19
93 116.29 precipitation 0.1 43200 > th dose independent rect. 2 2
124 116.33 radiation 40.0 1440 > th dose dependent rect. 14 19
130 116.40 radiation 10.0 14400 < th dose independent rect. 11 19
151 116.54 precipitation 0.1 43200 > th dose dependent rect. 17 1
171 116.55 precipitation 0.1 43200 > th dose dependent rect. 15 2
178 116.61 temperature 25.0 14400 > th dose independent rect. 2 1
180 116.64 precipitation 0.1 43200 > th dose independent rect. 13 4
185 116.68 precipitation 0.1 43200 < th dose independent rect. 13 4
187 116.68 wind 3.0 43200 < th dose dependent rect. 3 2
188 116.68 precipitation 0.1 43200 < th dose dependent rect. 13 4
189 116.71 atmosphere 1005.0 14400 > th dose independent rect. 11 7
191 116.72 precipitation 0.1 43200 > th dose independent rect. 16 1
192 116.74 atmosphere 1005.0 14400 > th dose independent rect. 17 1
197 116.76 precipitation 0.1 43200 < th dose independent rect. 16 1
199 116.76 precipitation 0.1 43200 < th dose dependent rect. 16 1
203 116.78 atmosphere 1005.0 14400 < th dose independent rect. 17 1
208 116.81 atmosphere 1005.0 14400 < th dose independent rect. 12 6
227 116.86 radiation 1.0 43200 < th dose dependent rect. 23 1
238 116.95 radiation 40.0 1440 > th dose dependent rect. 14 1
315 117.16 precipitation 0.1 43200 < th dose independent rect. 13 1
316 117.16 precipitation 0.1 43200 < th dose dependent rect. 13 1
318 117.17 precipitation 0.1 43200 > th dose dependent rect. 23 5
326 117.17 precipitation 0.1 43200 > th dose dependent rect. 3 14
333 117.19 precipitation 0.1 43200 > th dose independent rect. 13 7
341 117.20 precipitation 0.1 43200 > th dose independent rect. 13 1
344 117.20 precipitation 0.1 43200 < th dose independent rect. 13 7
351 117.20 precipitation 0.1 43200 < th dose dependent rect. 13 7
356 117.23 radiation 10.0 14400 > th dose independent sin 19 NA
361 117.25 atmosphere 1005.0 14400 > th dose independent rect. 13 1
362 117.25 radiation 1.0 43200 < th dose dependent rect. 20 7
363 117.26 humidity 90.0 14400 > th dose independent rect. 1 3
378 117.28 precipitation 0.1 43200 > th dose dependent rect. 2 18
396 117.31 radiation 10.0 14400 < th dose independent sin 19 NA
411 117.35 atmosphere 1005.0 14400 < th dose independent rect. 13 1
417 117.36 precipitation 0.1 43200 > th dose dependent rect. 23 21
434 117.42 temperature 25.0 14400 < th dose independent rect. 3 1
471 117.50 radiation 20.0 14400 > th dose dependent rect. 6 2
484 117.50 precipitation 0.1 43200 > th dose dependent rect. 3 11
496 117.52 temperature 25.0 14400 < th dose independent rect. 1 1
530 117.56 precipitation 0.1 43200 > th dose independent rect. 3 17
531 117.56 precipitation 0.1 43200 < th dose independent rect. 3 17
536 117.56 precipitation 0.1 43200 < th dose dependent rect. 3 17
620 117.69 temperature 25.0 14400 < th dose independent rect. 1 3
633 117.73 precipitation 0.1 43200 < th dose independent rect. 19 1
637 117.73 precipitation 0.1 43200 < th dose dependent rect. 19 1
651 117.74 radiation 1.0 14400 > th dose dependent rect. 14 1
674 117.77 precipitation 0.1 43200 > th dose independent rect. 19 1
677 117.77 radiation 10.0 14400 < th dose independent rect. 18 22
696 117.78 precipitation 0.1 43200 > th dose dependent rect. 23 18
699 117.79 radiation 10.0 14400 < th dose independent rect. 5 11
711 117.79 radiation 20.0 14400 < th dose dependent sin 18 NA
763 117.86 humidity 90.0 14400 > th dose dependent rect. 1 1
764 117.86 precipitation 0.1 43200 > th dose dependent rect. 11 9
765 117.86 precipitation 0.1 43200 > th dose dependent rect. 9 11
769 117.87 precipitation 0.1 43200 > th dose independent rect. 3 15
770 117.87 precipitation 0.1 43200 < th dose independent rect. 3 15
786 117.87 precipitation 0.1 43200 < th dose dependent rect. 3 15
829 117.92 precipitation 0.1 43200 < th dose independent rect. 23 6
832 117.92 precipitation 0.1 43200 < th dose dependent rect. 23 6
850 117.93 radiation 10.0 14400 < th dose independent rect. 4 20
858 117.94 radiation 10.0 14400 < th dose independent no NA NA
938 117.96 precipitation 0.1 43200 > th dose dependent sin 3 NA
961 117.98 precipitation 0.1 43200 < th dose independent rect. 23 21
966 117.98 precipitation 0.1 43200 < th dose dependent rect. 23 21
968 117.99 precipitation 0.1 43200 > th dose independent rect. 23 21
972 118.00 precipitation 0.1 43200 > th dose independent rect. 23 6
992 118.01 precipitation 0.1 43200 > th dose dependent rect. 23 15