Os01g0639600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1645 family protein.
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Os01g0639600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1645 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.34 | 0.487 | 11.4 | 2.63 | 0.513 | -3.21 | -0.916 | 15.3 | 0.69 | 11.7 | 1000 | 295 | -- | -- |
| 109.28 | 0.487 | 11.6 | 1.69 | 0.514 | -1.3 | -0.82 | -- | 0.716 | 12.4 | 995.7 | 638 | -- | -- |
| 110.65 | 0.49 | 11.4 | 2.62 | 0.521 | -3.3 | -- | 15.8 | 0.685 | 12.3 | 1000 | 300 | -- | -- |
| 112.38 | 0.494 | 11.6 | 1.62 | 0.516 | -1.14 | -- | -- | 0.704 | 12.3 | 995.9 | 661 | -- | -- |
| 127.43 | 0.526 | 11.4 | 2.63 | -- | -3.34 | -- | 16 | 0.677 | -- | 1000 | 296 | -- | -- |
| 116.36 | 0.506 | 11.6 | 1.61 | 0.53 | -- | -0.894 | -- | 0.724 | 11.8 | -- | -- | -- | -- |
| 119.54 | 0.512 | 11.6 | 1.57 | 0.538 | -- | -- | -- | 0.722 | 12.3 | -- | -- | -- | -- |
| 128.76 | 0.528 | 11.6 | 1.6 | -- | -1.29 | -- | -- | 0.69 | -- | 995.7 | 705 | -- | -- |
| 180.89 | 0.626 | 11.6 | -- | 0.49 | -0.847 | -- | -- | 0.548 | 12.2 | 995.8 | 646 | -- | -- |
| 137.75 | 0.548 | 11.6 | 1.56 | -- | -- | -- | -- | 0.714 | -- | -- | -- | -- | -- |
| 184.79 | 0.636 | 11.6 | -- | 0.516 | -- | -- | -- | 0.547 | 12.1 | -- | -- | -- | -- |
| 196.15 | 0.652 | 11.6 | -- | -- | -1.03 | -- | -- | 0.522 | -- | 995.7 | 686 | -- | -- |
| 201.59 | 0.663 | 11.6 | -- | -- | -- | -- | -- | 0.541 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.71 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 16 |
| 2 | 101.86 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 4 | 19 |
| 3 | 101.96 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 4 | 102.12 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 4 | 17 |
| 6 | 102.33 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 20 | 102.62 | atmosphere | 1000.0 | 270 | > th | dose independent | sin | 13 | NA |
| 22 | 102.80 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 23 | 102.81 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 38 | 102.86 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 19 | 4 |
| 54 | 103.10 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 22 |
| 55 | 103.13 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 57 | 103.24 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 58 | 103.31 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 20 |
| 59 | 103.32 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 61 | 103.43 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 12 |
| 63 | 103.58 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 64 | 103.60 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 65 | 103.60 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 6 |
| 67 | 103.62 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 19 | 6 |
| 68 | 103.63 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 9 | 7 |
| 72 | 103.67 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 73 | 103.70 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 74 | 103.71 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 81 | 103.81 | wind | 1.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 86 | 103.92 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 13 | 18 |
| 87 | 103.96 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 19 | 12 |
| 89 | 103.99 | atmosphere | 1000.0 | 270 | < th | dose independent | sin | 14 | NA |
| 101 | 104.21 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 107 | 104.22 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 9 | 23 |
| 137 | 104.35 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 150 | 104.44 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 165 | 104.57 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 13 |
| 167 | 104.57 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 13 |
| 170 | 104.59 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 19 | 23 |
| 171 | 104.60 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 172 | 104.61 | atmosphere | 1000.0 | 270 | > th | dose independent | sin | 15 | NA |
| 174 | 104.61 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 178 | 104.64 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 10 | NA |
| 185 | 104.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 202 | 104.74 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 225 | 104.85 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 22 | 14 |
| 229 | 104.85 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 237 | 104.88 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 242 | 104.93 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 255 | 105.01 | atmosphere | 1000.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 259 | 105.03 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 17 | 11 |
| 262 | 105.04 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 17 | 12 |
| 263 | 105.04 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 18 | 12 |
| 265 | 105.06 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 268 | 105.06 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 11 | 12 |
| 269 | 105.06 | atmosphere | 1000.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 277 | 105.11 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 313 | 105.24 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 18 | 12 |
| 315 | 105.25 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 324 | 105.29 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 11 |
| 344 | 105.39 | wind | 1.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 353 | 105.41 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 16 |
| 356 | 105.41 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 360 | 105.44 | wind | 1.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 382 | 105.51 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 432 | 105.61 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 433 | 105.62 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 12 |
| 439 | 105.65 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 474 | 105.74 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 477 | 105.74 | wind | 1.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 506 | 105.78 | humidity | 60.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 507 | 105.78 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 510 | 105.78 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 516 | 105.80 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 21 |
| 518 | 105.80 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 21 |
| 526 | 105.82 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 535 | 105.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 13 |
| 547 | 105.88 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 559 | 105.92 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 567 | 105.93 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 568 | 105.93 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 15 |
| 584 | 105.96 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 588 | 105.97 | wind | 1.0 | 720 | > th | dose independent | rect. | 7 | 4 |
| 598 | 105.98 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 601 | 105.98 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 13 |
| 603 | 105.99 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 604 | 105.99 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 612 | 106.00 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 20 |
| 625 | 106.03 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 9 | NA |
| 631 | 106.03 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 7 | 4 |
| 722 | 106.15 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 16 | 19 |
| 725 | 106.15 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 16 | 19 |
| 729 | 106.16 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 16 | 17 |
| 732 | 106.16 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 16 | 17 |
| 761 | 106.20 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 814 | 106.30 | wind | 1.0 | 1440 | > th | dose independent | rect. | 9 | 2 |
| 823 | 106.31 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 837 | 106.34 | humidity | 60.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 838 | 106.34 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 16 | 3 |
| 843 | 106.34 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 846 | 106.35 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 847 | 106.35 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 864 | 106.37 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 22 | 12 |
| 875 | 106.39 | wind | 7.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 887 | 106.40 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 3 |
| 888 | 106.41 | atmosphere | 1000.0 | 10 | < th | dose independent | sin | 11 | NA |
| 890 | 106.41 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 901 | 106.43 | atmosphere | 1000.0 | 720 | < th | dose independent | rect. | 19 | 3 |
| 910 | 106.44 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 17 | 13 |
| 915 | 106.44 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 926 | 106.45 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 21 | 23 |
| 927 | 106.45 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 931 | 106.46 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 2 |
| 942 | 106.47 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 962 | 106.50 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 12 |