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Os01g0623200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : C4-dicarboxylate transporter/malic acid transport protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.92 (0.047) R2 : 0.436
β1 : 2.04 (0.172) R2dD : 0.181 R2D : 0.206
β2 : 0.94 (0.114) R2dC : 0.0842 R2C : 0.0521
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.949 (0.1) R2dN8 : 0.148 R2N8 : 0.165
σ : 0.885
deviance : 356.97
__
_____
C
peak time of C : 2
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
337.43 0.863 9.96 1.81 2.73 -1.55 -3.22 2.65 -1.04 1.97 2.412 249 -- --
340.94 0.86 9.96 1.87 2.69 -1.52 -0.407 -- -1.02 2.04 2.282 263 -- --
342.55 0.862 9.94 1.87 3.77 -2.42 -- 0.195 -0.998 2.07 1.797 287 -- --
340.51 0.859 9.95 1.91 3.02 -1.77 -- -- -1.02 1.96 2.272 256 -- --
373.59 0.905 9.91 2.09 -- 0.58 -- 0.171 -0.913 -- 2.417 2732 -- --
356.1 0.885 9.92 2.03 0.944 -- -0.501 -- -0.952 2.16 -- -- -- --
356.97 0.885 9.92 2.04 0.94 -- -- -- -0.949 2 -- -- -- --
373.27 0.904 9.9 2.08 -- 0.587 -- -- -0.907 -- 3.264 1284 -- --
431.19 0.967 10 -- 3.53 -2.18 -- -- -1.25 2.3 0.01897 313 -- --
410.15 0.946 9.91 2.08 -- -- -- -- -0.927 -- -- -- -- --
467.07 1.01 9.97 -- 0.979 -- -- -- -1.18 2.06 -- -- -- --
487.94 1.03 9.96 -- -- 0.585 -- -- -1.14 -- 3.264 1284 -- --
524.6 1.07 9.96 -- -- -- -- -- -1.16 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 325.42 wind 3.0 90 > th dose independent rect. 13 2
2 327.18 wind 1.0 720 > th dose independent rect. 4 2
3 327.68 humidity 60.0 90 > th dose independent rect. 13 2
4 327.79 wind 1.0 90 > th dose dependent rect. 13 2
5 327.82 wind 9.0 720 < th dose independent rect. 18 21
6 327.91 radiation 40.0 10 < th dose dependent rect. 14 1
7 328.04 wind 9.0 720 < th dose independent rect. 3 3
8 328.04 temperature 10.0 720 > th dose independent rect. 3 3
9 328.04 temperature 30.0 720 < th dose independent rect. 3 3
10 328.04 humidity 50.0 720 > th dose independent rect. 3 3
13 328.04 atmosphere 995.0 720 > th dose independent rect. 3 3
14 328.04 radiation 20.0 720 < th dose independent rect. 3 3
17 328.04 temperature 10.0 720 > th dose independent rect. 6 21
18 328.05 temperature 10.0 720 > th dose independent rect. 15 3
19 328.05 atmosphere 1015.0 720 < th dose independent rect. 15 3
20 328.05 temperature 10.0 720 > th dose independent rect. 18 21
21 328.05 humidity 60.0 10 > th dose dependent rect. 14 1
23 328.20 humidity 70.0 720 > th dose independent rect. 19 11
25 328.39 precipitation 0.1 720 < th dose independent rect. 15 3
26 328.39 precipitation 0.1 720 < th dose dependent rect. 15 3
28 328.50 radiation 40.0 720 < th dose dependent rect. 3 3
29 328.51 radiation 40.0 720 < th dose independent rect. 15 3
30 328.54 precipitation 0.1 720 < th dose independent rect. 3 3
31 328.54 precipitation 0.1 720 < th dose dependent rect. 3 3
32 328.61 radiation 30.0 14400 < th dose independent rect. 17 13
34 328.72 atmosphere 1005.0 90 > th dose independent rect. 13 2
35 328.98 wind 9.0 720 < th dose independent rect. 19 11
36 328.98 radiation 30.0 720 < th dose independent rect. 18 13
37 329.00 wind 9.0 720 < th dose independent rect. 18 13
38 329.01 temperature 10.0 720 > th dose independent rect. 7 11
39 329.01 atmosphere 1015.0 720 < th dose independent rect. 7 11
40 329.01 temperature 10.0 720 > th dose independent rect. 18 13
41 329.01 humidity 50.0 720 > th dose independent rect. 18 13
44 329.07 wind 1.0 720 > th dose independent rect. 15 3
46 329.15 humidity 50.0 720 > th dose dependent rect. 3 3
47 329.16 temperature 10.0 720 > th dose independent rect. 19 11
48 329.16 temperature 30.0 720 < th dose independent rect. 19 11
49 329.16 humidity 50.0 720 > th dose independent rect. 19 11
50 329.16 atmosphere 995.0 720 > th dose independent rect. 19 11
51 329.16 radiation 20.0 720 < th dose independent rect. 19 11
54 329.16 temperature 10.0 720 > th dose independent rect. 6 13
55 329.16 atmosphere 1015.0 720 < th dose independent rect. 6 13
56 329.19 radiation 40.0 720 < th dose dependent rect. 19 11
61 329.32 humidity 50.0 720 > th dose dependent rect. 5 1
64 329.58 wind 1.0 30 > th dose independent rect. 5 12
65 329.61 radiation 20.0 720 < th dose independent rect. 17 1
66 329.66 atmosphere 1000.0 90 > th dose dependent rect. 13 2
67 329.80 radiation 40.0 720 < th dose dependent rect. 5 1
69 329.83 temperature 30.0 30 < th dose dependent rect. 14 1
71 329.90 precipitation 0.1 720 < th dose independent rect. 7 11
72 329.90 precipitation 0.1 720 < th dose dependent rect. 7 11
73 329.95 wind 1.0 720 > th dose independent rect. 17 1
74 330.02 wind 9.0 720 < th dose independent rect. 15 3
75 330.04 temperature 10.0 720 > th dose independent rect. 17 1
76 330.04 atmosphere 1015.0 720 < th dose independent rect. 17 1
79 330.04 temperature 10.0 720 > th dose independent rect. 18 23
81 330.08 precipitation 0.1 720 < th dose independent rect. 17 1
82 330.08 precipitation 0.1 720 < th dose dependent rect. 17 1
84 330.13 wind 9.0 720 < th dose independent rect. 17 1
85 330.15 radiation 40.0 720 < th dose dependent rect. 18 13
86 330.17 precipitation 0.1 720 < th dose independent rect. 6 21
87 330.17 precipitation 0.1 720 < th dose dependent rect. 6 21
89 330.21 wind 7.0 720 < th dose independent rect. 5 1
91 330.21 temperature 10.0 720 > th dose independent rect. 5 1
92 330.21 temperature 30.0 720 < th dose independent rect. 5 1
93 330.21 humidity 50.0 720 > th dose independent rect. 5 1
96 330.21 atmosphere 995.0 720 > th dose independent rect. 5 1
97 330.21 atmosphere 1015.0 720 < th dose independent rect. 5 1
98 330.21 radiation 20.0 720 < th dose independent rect. 5 1
101 330.21 temperature 10.0 720 > th dose independent rect. 6 23
102 330.22 atmosphere 995.0 720 > th dose independent rect. 18 13
103 330.37 temperature 30.0 720 < th dose independent rect. 18 13
106 330.69 precipitation 0.1 720 < th dose independent rect. 5 1
107 330.69 precipitation 0.1 720 < th dose dependent rect. 5 1
109 330.82 atmosphere 1015.0 720 < th dose independent rect. 3 3
113 330.95 humidity 50.0 720 > th dose independent rect. 18 21
114 331.02 atmosphere 995.0 720 > th dose independent rect. 18 21
115 331.05 precipitation 0.1 720 < th dose independent rect. 21 6
116 331.05 precipitation 0.1 720 < th dose dependent rect. 21 6
119 331.21 temperature 30.0 30 < th dose independent rect. 13 18
121 331.35 precipitation 0.1 720 < th dose independent rect. 18 21
122 331.35 precipitation 0.1 720 < th dose dependent rect. 18 21
123 331.44 precipitation 0.1 720 < th dose independent rect. 6 13
124 331.44 radiation 1.0 270 > th dose independent rect. 14 22
125 331.44 precipitation 0.1 720 < th dose dependent rect. 6 13
129 331.81 radiation 1.0 720 < th dose independent rect. 19 11
131 331.88 atmosphere 1015.0 90 < th dose independent rect. 15 22
132 331.89 radiation 40.0 720 < th dose dependent rect. 17 1
133 331.97 temperature 30.0 30 < th dose independent rect. 5 12
142 332.37 wind 9.0 30 < th dose independent rect. 5 12
143 332.38 humidity 90.0 90 < th dose independent rect. 13 2
144 332.38 radiation 1.0 720 < th dose independent rect. 3 3
146 332.41 temperature 10.0 30 > th dose independent rect. 5 12
148 332.41 temperature 10.0 30 > th dose independent rect. 17 12
149 332.41 atmosphere 1015.0 30 < th dose independent rect. 5 12
150 332.41 radiation 20.0 30 < th dose independent rect. 17 12
153 332.42 atmosphere 995.0 30 > th dose independent rect. 5 12
154 332.43 wind 3.0 10 > th dose dependent rect. 14 1
155 332.47 precipitation 0.1 30 < th dose independent rect. 5 12
156 332.47 precipitation 0.1 30 < th dose dependent rect. 5 12
157 332.48 radiation 10.0 90 < th dose dependent rect. 5 9
158 332.49 humidity 50.0 90 > th dose dependent rect. 13 2
162 332.56 wind 9.0 90 < th dose independent rect. 13 2
176 332.75 precipitation 0.1 30 < th dose independent rect. 17 12
177 332.75 precipitation 0.1 30 < th dose dependent rect. 17 12
178 332.80 wind 9.0 30 < th dose independent rect. 17 12
180 332.80 radiation 10.0 90 > th dose independent rect. 17 20
186 332.93 radiation 10.0 90 > th dose independent sin 8 NA
189 332.98 precipitation 0.1 90 < th dose independent rect. 13 2
190 332.98 precipitation 0.1 90 < th dose dependent rect. 13 2
192 333.03 temperature 10.0 90 > th dose independent rect. 13 2
194 333.03 atmosphere 1010.0 90 < th dose independent rect. 13 2
196 333.03 temperature 10.0 90 > th dose independent rect. 15 22
202 333.11 wind 9.0 720 < th dose independent rect. 9 6
206 333.15 radiation 40.0 30 < th dose dependent rect. 17 12
213 333.25 atmosphere 995.0 720 > th dose independent rect. 17 1
214 333.27 humidity 60.0 30 > th dose independent rect. 13 18
216 333.30 temperature 30.0 10 < th dose independent rect. 14 1
218 333.31 precipitation 0.1 720 < th dose independent rect. 19 11
219 333.31 precipitation 0.1 720 < th dose dependent rect. 19 11
224 333.35 humidity 60.0 10 > th dose independent rect. 13 4
231 333.36 humidity 50.0 30 > th dose independent rect. 17 12
245 333.39 atmosphere 1015.0 30 < th dose independent rect. 17 12
247 333.42 radiation 1.0 720 < th dose dependent rect. 21 6
248 333.43 temperature 10.0 720 > th dose independent rect. 21 6
249 333.43 temperature 30.0 720 < th dose independent rect. 21 6
250 333.43 humidity 50.0 720 > th dose independent rect. 21 6
253 333.43 atmosphere 995.0 720 > th dose independent rect. 21 6
254 333.43 radiation 1.0 720 < th dose independent rect. 21 6
259 333.43 temperature 10.0 720 > th dose independent rect. 3 18
265 333.45 precipitation 0.1 90 < th dose independent rect. 15 22
266 333.45 precipitation 0.1 90 < th dose dependent rect. 15 22
267 333.49 temperature 30.0 90 < th dose independent rect. 13 2
278 333.54 atmosphere 1000.0 10 > th dose dependent rect. 13 4
279 333.55 radiation 40.0 10 < th dose independent rect. 14 1
282 333.61 temperature 10.0 720 > th dose independent rect. 9 6
283 333.61 atmosphere 1015.0 720 < th dose independent rect. 9 6
284 333.61 temperature 10.0 720 > th dose independent rect. 15 18
303 333.72 precipitation 0.1 720 < th dose independent rect. 18 13
305 333.72 precipitation 0.1 720 < th dose dependent rect. 18 13
306 333.75 wind 9.0 720 < th dose independent rect. 21 6
309 333.80 atmosphere 995.0 30 > th dose independent rect. 17 12
315 333.85 radiation 10.0 90 > th dose independent rect. 6 7
328 333.86 atmosphere 1000.0 10 > th dose independent rect. 14 1
335 333.91 precipitation 0.1 720 < th dose independent rect. 9 6
338 333.91 precipitation 0.1 720 < th dose dependent rect. 9 6
345 333.99 wind 9.0 10 < th dose independent rect. 14 1
346 333.99 temperature 10.0 10 > th dose independent rect. 14 1
349 333.99 atmosphere 1010.0 10 < th dose independent rect. 14 1
351 333.99 radiation 1.0 10 > th dose independent rect. 14 1
352 333.99 precipitation 0.1 10 < th dose independent rect. 14 1
354 333.99 wind 9.0 90 < th dose independent rect. 15 22
355 333.99 temperature 10.0 10 > th dose independent rect. 15 23
356 333.99 precipitation 0.1 10 < th dose dependent rect. 14 1
362 334.06 atmosphere 1015.0 10 < th dose dependent rect. 14 1
364 334.08 atmosphere 995.0 10 > th dose dependent rect. 14 1
367 334.10 atmosphere 995.0 90 > th dose independent rect. 15 22
369 334.11 wind 9.0 720 < th dose dependent rect. 17 1
372 334.14 temperature 10.0 90 > th dose dependent rect. 13 2
397 334.36 atmosphere 1005.0 270 > th dose independent rect. 11 3
402 334.39 temperature 30.0 10 < th dose independent rect. 12 5
409 334.51 wind 9.0 720 < th dose dependent rect. 5 1
411 334.53 humidity 90.0 10 < th dose independent rect. 14 1
423 334.68 atmosphere 995.0 10 > th dose independent rect. 15 23
427 334.72 humidity 50.0 30 > th dose independent rect. 5 12
430 334.79 radiation 10.0 90 > th dose dependent rect. 14 1
437 334.87 temperature 10.0 10 > th dose dependent rect. 14 1
438 334.90 wind 9.0 10 < th dose dependent rect. 14 1
445 334.98 atmosphere 995.0 720 > th dose independent rect. 15 3
451 335.05 precipitation 0.1 10 < th dose independent rect. 15 23
452 335.05 precipitation 0.1 10 < th dose dependent rect. 15 23
488 335.28 wind 9.0 720 < th dose independent rect. 7 11
508 335.38 radiation 40.0 270 < th dose independent rect. 14 12
510 335.39 wind 9.0 720 < th dose independent rect. 6 13
537 335.46 radiation 10.0 10 > th dose independent rect. 16 22
539 335.47 humidity 80.0 10 < th dose independent rect. 7 7
547 335.52 radiation 30.0 90 < th dose independent rect. 7 22
557 335.59 precipitation 0.1 720 < th dose independent rect. 12 9
558 335.59 atmosphere 1015.0 10 < th dose independent rect. 15 23
559 335.59 precipitation 0.1 720 < th dose dependent rect. 12 9
584 335.73 temperature 10.0 720 > th dose dependent rect. 17 1
589 335.76 atmosphere 995.0 720 > th dose independent rect. 9 6
595 335.79 precipitation 0.1 270 < th dose independent rect. 15 11
596 335.79 wind 9.0 720 < th dose independent rect. 6 21
597 335.79 precipitation 0.1 270 < th dose dependent rect. 15 11
606 335.86 humidity 80.0 10 < th dose independent rect. 17 21
608 335.87 radiation 1.0 10 > th dose dependent rect. 14 1
610 335.88 radiation 10.0 30 < th dose independent rect. 6 1
611 335.89 wind 9.0 10 < th dose independent rect. 15 23
625 335.97 temperature 10.0 1440 > th dose independent rect. 16 23
628 335.97 humidity 90.0 30 < th dose dependent rect. 14 1
629 335.98 humidity 70.0 90 < th dose independent rect. 14 1
643 336.04 atmosphere 995.0 720 > th dose dependent rect. 5 1
645 336.06 wind 9.0 270 < th dose independent rect. 2 12
646 336.07 atmosphere 1005.0 10 > th dose independent rect. 13 4
650 336.10 humidity 80.0 30 > th dose independent rect. 5 10
652 336.11 precipitation 0.1 720 < th dose independent rect. 21 15
653 336.11 precipitation 0.1 720 < th dose dependent rect. 21 15
658 336.14 precipitation 0.1 720 < th dose independent rect. 9 15
660 336.14 precipitation 0.1 720 < th dose dependent rect. 9 15
665 336.17 precipitation 0.1 720 < th dose independent rect. 6 7
667 336.17 precipitation 0.1 720 < th dose dependent rect. 6 7
670 336.18 atmosphere 1010.0 30 < th dose independent rect. 6 1
678 336.22 atmosphere 995.0 270 > th dose independent rect. 2 13
722 336.35 temperature 10.0 720 > th dose independent rect. 6 7
723 336.35 atmosphere 995.0 720 > th dose independent rect. 6 7
724 336.35 atmosphere 1015.0 720 < th dose independent rect. 6 7
726 336.35 temperature 10.0 720 > th dose independent rect. 13 17
727 336.36 radiation 1.0 270 > th dose independent rect. 6 23
730 336.37 radiation 1.0 270 > th dose independent rect. 6 13
783 336.46 humidity 50.0 30 > th dose dependent rect. 5 12
786 336.49 humidity 90.0 10 < th dose dependent rect. 6 1
787 336.50 radiation 20.0 30 < th dose dependent rect. 19 22
792 336.57 radiation 40.0 720 < th dose independent rect. 15 18
793 336.57 atmosphere 1015.0 10 < th dose independent rect. 17 20
795 336.58 humidity 50.0 720 > th dose independent rect. 17 1
811 336.60 temperature 10.0 720 > th dose independent rect. 18 7
812 336.60 humidity 50.0 720 > th dose independent rect. 18 7
813 336.60 radiation 20.0 720 < th dose independent rect. 18 7
816 336.60 precipitation 0.1 720 < th dose independent rect. 24 9
817 336.60 temperature 10.0 720 > th dose independent rect. 1 17
818 336.60 atmosphere 1000.0 270 > th dose dependent rect. 11 4
819 336.60 precipitation 0.1 720 < th dose dependent rect. 24 9
820 336.61 temperature 10.0 270 > th dose independent rect. 2 12
821 336.61 temperature 10.0 270 > th dose independent rect. 14 12
823 336.61 atmosphere 1015.0 270 < th dose independent rect. 2 12
845 336.72 radiation 10.0 10 > th dose independent sin 7 NA
878 336.77 humidity 50.0 720 > th dose independent rect. 21 15
880 336.78 precipitation 0.1 270 < th dose independent rect. 2 13
882 336.78 precipitation 0.1 270 < th dose dependent rect. 2 13
883 336.79 wind 9.0 720 < th dose independent rect. 18 7
885 336.80 temperature 30.0 30 < th dose independent rect. 13 13
890 336.82 temperature 10.0 90 > th dose dependent rect. 15 22
894 336.85 wind 1.0 720 > th dose independent rect. 12 9
901 336.87 radiation 20.0 90 < th dose dependent rect. 19 14
959 337.03 temperature 10.0 720 > th dose independent rect. 12 9
960 337.03 temperature 10.0 720 > th dose independent rect. 21 15
961 337.03 atmosphere 995.0 720 > th dose independent rect. 21 15
964 337.04 wind 1.0 30 > th dose dependent rect. 6 1
967 337.06 radiation 1.0 10 > th dose independent rect. 6 1
987 337.09 radiation 1.0 270 < th dose independent rect. 9 21
994 337.13 wind 9.0 720 < th dose independent rect. 3 18
995 337.13 wind 9.0 720 < th dose independent rect. 15 18
999 337.15 wind 1.0 270 > th dose independent rect. 2 13
1000 337.15 temperature 25.0 10 > th dose dependent rect. 6 1