Os01g0608300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0608300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 361.93 | 0.894 | 6.83 | 1.22 | 4.38 | -1.88 | 3.47 | 0.62 | -0.769 | 7.53 | 21.51 | 2307 | -- | -- |
| 362.73 | 0.887 | 6.85 | 1.08 | 4.36 | -1.93 | 3.43 | -- | -0.771 | 7.51 | 21.7 | 2322 | -- | -- |
| 394.78 | 0.925 | 6.84 | 1.22 | 4.4 | -1.9 | -- | 0.326 | -0.77 | 7.52 | 21.6 | 2317 | -- | -- |
| 394.96 | 0.926 | 6.86 | 1.13 | 4.38 | -1.92 | -- | -- | -0.802 | 7.51 | 21.69 | 2314 | -- | -- |
| 1314.5 | 1.69 | 6.93 | 1.83 | -- | -2.37 | -- | 0.723 | -0.409 | -- | 21.84 | 675 | -- | -- |
| 468.72 | 1.01 | 6.99 | 0.119 | 4.46 | -- | 3.53 | -- | -1.4 | 7.64 | -- | -- | -- | -- |
| 503.78 | 1.05 | 6.99 | 0.206 | 4.46 | -- | -- | -- | -1.41 | 7.63 | -- | -- | -- | -- |
| 942.18 | 1.43 | 6.85 | 1.33 | -- | -3.48 | -- | -- | -0.291 | -- | 26.2 | 524 | -- | -- |
| 416.78 | 0.951 | 6.9 | -- | 4.35 | -1.48 | -- | -- | -0.971 | 7.55 | 22.26 | 1999 | -- | -- |
| 1573.61 | 1.85 | 7.1 | 0.268 | -- | -- | -- | -- | -1.34 | -- | -- | -- | -- | -- |
| 504.9 | 1.05 | 7 | -- | 4.46 | -- | -- | -- | -1.43 | 7.63 | -- | -- | -- | -- |
| 978.93 | 1.46 | 6.92 | -- | -- | -3.24 | -- | -- | -0.53 | -- | 26.1 | 518 | -- | -- |
| 1575.5 | 1.85 | 7.11 | -- | -- | -- | -- | -- | -1.37 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 357.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 5 | 358.17 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 32 | 359.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 51 | 360.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 121 | 363.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 128 | 363.38 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 149 | 363.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 150 | 363.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 153 | 364.02 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 200 | 365.23 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 239 | 366.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 296 | 367.21 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 334 | 367.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 354 | 368.25 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 379 | 368.62 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 386 | 368.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 390 | 368.74 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 567 | 370.45 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 570 | 370.47 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 6 |
| 608 | 370.79 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |
| 655 | 371.18 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 675 | 371.42 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 689 | 371.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 694 | 371.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 779 | 372.25 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 793 | 372.31 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |