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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0605400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Quinonprotein alcohol dehydrogenase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.1 (0.0206) R2 : 0.00261
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0475 (0.0435) R2dN8 : 0.00337 R2N8 : 0.00261
σ : 0.389
deviance : 69.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
62.18 0.37 3.11 -0.172 0.316 0.267 0.212 0.00541 0.0263 15.9 8.94 11 -- --
62.16 0.37 3.11 -0.172 0.303 0.255 0.229 -- 0.0243 16 8.94 11 -- --
62.27 0.37 3.11 -0.174 0.301 0.251 -- -0.0722 0.0245 16 8.94 11 -- --
62.31 0.37 3.11 -0.168 0.301 0.249 -- -- 0.0258 16 8.947 11 -- --
66.25 0.381 3.11 -0.178 -- 0.154 -- -0.101 0.0208 -- 8.94 11 -- --
64.27 0.376 3.11 -0.151 0.289 -- 0.0164 -- 0.0346 19.6 -- -- -- --
64.27 0.375 3.11 -0.152 0.289 -- -- -- 0.0346 19.6 -- -- -- --
66.11 0.38 3.1 -0.168 -- 0.155 -- -- 0.0264 -- 6.973 7 -- --
63 0.37 3.1 -- 0.314 0.252 -- -- 0.0455 16.1 11.44 16 -- --
68.76 0.387 3.1 -0.156 -- -- -- -- 0.0302 -- -- -- -- --
64.88 0.377 3.11 -- 0.29 -- -- -- 0.0515 19.6 -- -- -- --
66.86 0.382 3.1 -- -- 0.152 -- -- 0.0451 -- 6.973 7 -- --
69.4 0.389 3.1 -- -- -- -- -- 0.0475 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.93 temperature 15.0 270 > th dose independent rect. 5 10
3 60.05 atmosphere 1010.0 90 < th dose dependent rect. 17 2
5 60.18 temperature 15.0 90 > th dose independent rect. 7 9
6 60.19 atmosphere 1015.0 270 < th dose dependent rect. 14 5
8 60.29 wind 7.0 90 < th dose independent rect. 19 22
16 60.42 humidity 50.0 90 > th dose independent rect. 16 3
18 60.43 humidity 50.0 30 > th dose independent rect. 16 16
20 60.45 wind 7.0 270 < th dose independent rect. 5 9
21 60.45 atmosphere 1015.0 10 < th dose dependent rect. 16 4
25 60.50 wind 7.0 90 < th dose independent rect. 7 9
27 60.51 atmosphere 995.0 270 > th dose independent rect. 5 10
31 60.53 atmosphere 1015.0 10 < th dose dependent rect. 16 6
32 60.54 radiation 40.0 30 < th dose dependent rect. 16 16
33 60.55 wind 7.0 270 < th dose independent rect. 19 19
39 60.58 radiation 20.0 90 < th dose independent rect. 16 15
40 60.59 radiation 20.0 90 < th dose independent rect. 16 3
41 60.59 wind 1.0 270 > th dose independent rect. 5 9
42 60.59 temperature 10.0 90 > th dose dependent rect. 17 2
43 60.59 temperature 10.0 270 > th dose dependent rect. 14 5
49 60.61 wind 7.0 90 < th dose independent rect. 17 2
52 60.62 humidity 90.0 270 < th dose independent rect. 6 8
53 60.62 humidity 90.0 30 < th dose independent rect. 8 8
56 60.62 atmosphere 995.0 270 > th dose independent rect. 17 23
57 60.63 temperature 25.0 270 > th dose independent rect. 15 3
59 60.64 temperature 25.0 270 > th dose independent rect. 14 5
70 60.65 temperature 10.0 90 > th dose dependent rect. 16 16
72 60.66 temperature 15.0 270 > th dose independent rect. 14 15
77 60.67 humidity 80.0 30 < th dose independent rect. 1 5
79 60.67 precipitation 0.1 270 < th dose independent rect. 5 10
80 60.67 temperature 15.0 90 > th dose independent rect. 16 15
82 60.67 humidity 80.0 30 < th dose dependent rect. 1 5
85 60.67 precipitation 0.1 270 < th dose dependent rect. 5 10
93 60.69 temperature 20.0 90 > th dose independent rect. 17 2
100 60.70 wind 9.0 270 < th dose independent rect. 15 14
102 60.71 precipitation 0.1 90 < th dose independent rect. 17 2
104 60.71 wind 1.0 90 > th dose independent rect. 7 9
107 60.71 precipitation 0.1 90 < th dose dependent rect. 17 2
114 60.72 atmosphere 1015.0 270 < th dose independent rect. 5 10
117 60.72 temperature 10.0 270 > th dose dependent rect. 15 3
128 60.74 precipitation 0.1 270 < th dose independent rect. 15 14
129 60.74 precipitation 0.1 270 < th dose dependent rect. 15 14
134 60.75 radiation 40.0 90 < th dose dependent rect. 16 3
138 60.76 temperature 20.0 10 > th dose independent rect. 16 4
139 60.76 humidity 50.0 270 > th dose independent rect. 14 5
140 60.76 wind 9.0 90 < th dose dependent rect. 17 2
144 60.77 wind 1.0 270 > th dose independent rect. 19 19
154 60.78 radiation 40.0 270 < th dose independent rect. 15 14
162 60.79 wind 3.0 270 > th dose independent rect. 15 3
171 60.80 radiation 10.0 10 < th dose independent rect. 16 4
179 60.81 radiation 30.0 14400 < th dose independent rect. 17 4
182 60.81 temperature 15.0 90 > th dose independent rect. 19 22
186 60.82 temperature 10.0 90 > th dose independent rect. 17 2
188 60.82 atmosphere 1010.0 90 < th dose independent rect. 17 2
200 60.83 radiation 1.0 270 < th dose dependent rect. 13 13
203 60.84 wind 1.0 90 > th dose independent rect. 17 2
214 60.85 wind 7.0 270 < th dose independent rect. 14 5
217 60.85 atmosphere 1015.0 90 < th dose independent rect. 7 9
225 60.86 humidity 80.0 30 < th dose independent rect. 1 3
231 60.86 radiation 1.0 270 < th dose dependent sin 15 NA
232 60.86 humidity 80.0 30 < th dose dependent rect. 1 3
235 60.87 humidity 80.0 30 < th dose independent rect. 1 1
243 60.87 precipitation 0.1 270 < th dose independent rect. 14 5
246 60.87 temperature 20.0 10 > th dose independent rect. 8 8
248 60.87 humidity 80.0 30 < th dose dependent rect. 1 1
252 60.87 precipitation 0.1 270 < th dose dependent rect. 14 5
262 60.88 temperature 10.0 10 > th dose dependent rect. 16 16
265 60.89 wind 1.0 270 > th dose independent rect. 14 5
279 60.90 precipitation 0.1 90 < th dose independent rect. 7 9
282 60.90 precipitation 0.1 90 < th dose dependent rect. 7 9
292 60.91 temperature 10.0 270 > th dose independent rect. 14 5
294 60.91 atmosphere 1010.0 270 < th dose independent rect. 14 5
297 60.91 radiation 1.0 270 > th dose independent rect. 6 8
301 60.91 temperature 15.0 10 > th dose independent rect. 16 16
302 60.91 temperature 10.0 270 > th dose independent rect. 19 19
303 60.91 atmosphere 995.0 270 > th dose independent rect. 19 19
307 60.91 radiation 20.0 10 < th dose dependent rect. 16 4
308 60.91 radiation 1.0 270 < th dose dependent rect. 17 9
312 60.91 radiation 1.0 270 < th dose dependent rect. 5 21
324 60.93 temperature 10.0 270 > th dose dependent rect. 14 16
326 60.94 temperature 10.0 1440 > th dose independent rect. 9 8
330 60.94 temperature 10.0 1440 > th dose independent rect. 17 16
352 60.96 radiation 10.0 30 < th dose independent rect. 4 16
373 60.97 temperature 10.0 90 > th dose dependent rect. 8 8
380 60.98 precipitation 0.1 90 < th dose independent rect. 19 21
384 60.98 precipitation 0.1 90 < th dose dependent rect. 19 21
396 60.99 precipitation 0.1 270 < th dose independent rect. 19 19
399 60.99 wind 1.0 270 > th dose dependent rect. 16 1
407 60.99 radiation 10.0 10 < th dose dependent rect. 4 16
409 60.99 precipitation 0.1 270 < th dose dependent rect. 19 19
423 61.00 wind 1.0 270 > th dose dependent rect. 15 3
433 61.01 precipitation 0.1 270 < th dose independent rect. 1 18
436 61.01 precipitation 0.1 270 < th dose dependent rect. 1 18
440 61.02 wind 7.0 90 < th dose independent rect. 19 8
447 61.03 radiation 1.0 270 > th dose independent rect. 15 3
450 61.03 humidity 60.0 270 > th dose independent rect. 19 6
454 61.03 precipitation 0.1 90 < th dose independent rect. 3 16
464 61.03 precipitation 0.1 90 < th dose dependent rect. 3 16
468 61.04 radiation 40.0 270 < th dose independent rect. 14 5
470 61.04 temperature 10.0 270 > th dose independent rect. 19 6
471 61.04 temperature 30.0 270 < th dose independent rect. 19 6
473 61.04 atmosphere 995.0 270 > th dose independent rect. 19 6
474 61.04 radiation 1.0 270 < th dose independent rect. 19 6
483 61.04 atmosphere 1010.0 90 < th dose independent rect. 16 15
484 61.04 radiation 1.0 270 > th dose independent rect. 15 15
488 61.04 temperature 10.0 270 > th dose independent rect. 1 18
489 61.04 atmosphere 1015.0 270 < th dose independent rect. 1 18
504 61.05 wind 9.0 270 < th dose independent rect. 19 6
506 61.05 wind 9.0 10 < th dose independent rect. 16 16
527 61.06 atmosphere 995.0 270 > th dose independent rect. 5 22
542 61.07 temperature 10.0 90 > th dose independent rect. 19 8
543 61.07 temperature 30.0 90 < th dose independent rect. 19 8
546 61.07 atmosphere 995.0 90 > th dose independent rect. 19 8
547 61.07 radiation 1.0 90 < th dose independent rect. 19 8
555 61.07 temperature 10.0 90 > th dose independent rect. 3 16
556 61.07 atmosphere 1015.0 90 < th dose independent rect. 3 16
558 61.07 radiation 40.0 10 < th dose independent rect. 16 16
585 61.08 atmosphere 995.0 270 > th dose independent rect. 9 16
606 61.09 temperature 10.0 1440 > th dose independent rect. 17 4
609 61.09 radiation 30.0 1440 < th dose independent rect. 17 4
623 61.09 wind 9.0 90 < th dose independent rect. 3 16
629 61.09 temperature 10.0 1440 > th dose independent rect. 21 20
634 61.09 wind 1.0 270 > th dose dependent rect. 14 5
645 61.10 wind 1.0 270 > th dose independent rect. 19 8
648 61.10 temperature 10.0 10 > th dose independent rect. 8 8
650 61.10 atmosphere 1015.0 10 < th dose independent rect. 8 8
651 61.10 precipitation 0.1 10 < th dose independent rect. 8 8
658 61.10 temperature 10.0 10 > th dose dependent rect. 8 8
659 61.10 precipitation 0.1 10 < th dose dependent rect. 8 8
662 61.11 precipitation 0.1 270 < th dose independent rect. 19 6
663 61.11 precipitation 0.1 90 < th dose independent rect. 19 8
668 61.11 precipitation 0.1 270 < th dose dependent rect. 19 6
669 61.11 humidity 50.0 30 > th dose dependent rect. 20 8
670 61.11 precipitation 0.1 90 < th dose dependent rect. 19 8
710 61.12 wind 9.0 270 < th dose independent rect. 1 18
742 61.13 atmosphere 1015.0 90 < th dose dependent rect. 16 15
748 61.14 precipitation 0.1 10 < th dose independent rect. 16 4
755 61.14 precipitation 0.1 10 < th dose dependent rect. 16 4
762 61.15 wind 9.0 10 < th dose independent rect. 16 4
766 61.15 precipitation 0.1 10 < th dose independent rect. 16 16
767 61.15 humidity 50.0 270 > th dose independent rect. 19 19
769 61.15 precipitation 0.1 10 < th dose dependent rect. 16 16
791 61.16 radiation 10.0 10 < th dose independent rect. 16 15
794 61.16 atmosphere 1015.0 270 < th dose independent rect. 19 19
812 61.17 wind 1.0 10 > th dose independent rect. 16 4
839 61.18 wind 1.0 10 > th dose independent rect. 4 16
856 61.19 wind 1.0 270 > th dose independent rect. 19 6
875 61.19 humidity 50.0 270 > th dose independent rect. 14 16
891 61.20 radiation 30.0 10 < th dose independent rect. 16 4
893 61.20 radiation 10.0 10 < th dose independent rect. 12 8
897 61.20 radiation 1.0 270 < th dose independent rect. 11 14
907 61.20 temperature 10.0 10 > th dose dependent rect. 16 6
909 61.20 humidity 50.0 270 > th dose dependent rect. 19 6
910 61.20 atmosphere 995.0 90 > th dose dependent rect. 19 8
917 61.21 temperature 10.0 10 > th dose independent rect. 16 4
919 61.21 atmosphere 1010.0 10 < th dose independent rect. 16 4
928 61.21 radiation 1.0 270 < th dose independent rect. 13 12
931 61.21 temperature 10.0 10 > th dose independent rect. 20 20