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Os01g0604000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.017) R2 : 0.636
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.14 (0.0406) R2dC : 0.637 R2C : 0.635
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0221 (0.0358) R2dN8 : 0.000392 R2N8 : -0.00176
σ : 0.321
deviance : 47.08
__
_____
C
peak time of C : 23.3
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.25 0.287 11.4 0.338 0.553 0.596 -0.711 0.385 0.0643 22.4 20.56 9 -- --
37.45 0.285 11.4 0.338 0.545 0.605 -0.332 -- 0.0637 22.4 20.27 8 -- --
37.95 0.287 11.4 0.368 0.464 0.683 -- -0.107 0.0712 22 18.95 8 -- --
37.87 0.287 11.4 0.348 0.551 0.593 -- -- 0.0622 22.5 19.33 7 -- --
41.73 0.301 11.4 0.367 -- 0.93 -- -0.155 0.0353 -- 11.85 8 -- --
43.89 0.311 11.4 0.326 1.14 -- -0.232 -- 0.0586 23.2 -- -- -- --
44.12 0.311 11.4 0.335 1.14 -- -- -- 0.0594 23.3 -- -- -- --
41.72 0.301 11.4 0.324 -- 0.948 -- -- 0.0722 -- 11.28 7 -- --
41.08 0.299 11.4 -- 0.562 0.584 -- -- 0.0254 22.6 19.33 7 -- --
125.64 0.524 11.4 0.363 -- -- -- -- 0.0699 -- -- -- -- --
47.08 0.321 11.4 -- 1.14 -- -- -- 0.0221 23.3 -- -- -- --
44.5 0.311 11.4 -- -- 0.945 -- -- 0.0396 -- 10.7 7 -- --
129.13 0.53 11.4 -- -- -- -- -- 0.0296 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.25 radiation 20.0 10 < th dose dependent rect. 3 17
4 36.32 wind 1.0 270 > th dose independent rect. 1 18
5 36.32 radiation 10.0 10 < th dose dependent sin 0 NA
10 36.53 radiation 20.0 10 < th dose dependent rect. 1 23
23 36.85 radiation 10.0 10 < th dose independent rect. 3 17
35 36.95 radiation 20.0 10 < th dose dependent rect. 13 20
42 37.01 temperature 15.0 270 > th dose independent rect. 5 9
50 37.05 wind 7.0 270 < th dose independent rect. 14 15
106 37.35 radiation 20.0 10 < th dose dependent rect. 15 23
107 37.36 precipitation 0.1 270 < th dose independent rect. 5 9
108 37.36 precipitation 0.1 270 < th dose dependent rect. 5 9
109 37.37 humidity 90.0 14400 > th dose dependent rect. 9 1
111 37.38 radiation 20.0 10 < th dose dependent no NA NA
117 37.39 atmosphere 995.0 270 > th dose independent rect. 5 9
118 37.39 atmosphere 1015.0 270 < th dose independent rect. 5 9
119 37.39 temperature 10.0 270 > th dose independent rect. 14 15
135 37.46 radiation 40.0 270 < th dose independent rect. 14 15
162 37.55 precipitation 0.1 270 < th dose independent rect. 14 15
163 37.55 precipitation 0.1 270 < th dose dependent rect. 14 15
167 37.57 wind 3.0 14400 < th dose independent rect. 3 2
168 37.57 wind 9.0 270 < th dose independent rect. 5 9
169 37.57 atmosphere 995.0 270 > th dose independent rect. 14 15
180 37.60 wind 3.0 14400 > th dose independent rect. 3 2
193 37.64 radiation 20.0 10 < th dose dependent rect. 8 23
197 37.67 humidity 50.0 270 > th dose independent rect. 5 9
212 37.70 wind 9.0 270 < th dose independent rect. 1 18
222 37.72 humidity 80.0 43200 < th dose dependent rect. 4 1
246 37.79 atmosphere 995.0 270 > th dose independent rect. 1 18
263 37.83 radiation 30.0 43200 < th dose independent rect. 11 1
268 37.84 humidity 70.0 270 > th dose independent rect. 18 7
269 37.84 atmosphere 995.0 10 > th dose independent rect. 3 17
277 37.85 humidity 80.0 43200 < th dose dependent rect. 1 6
279 37.86 wind 9.0 43200 > th dose independent rect. 6 8
283 37.87 wind 1.0 270 > th dose independent rect. 13 7
285 37.87 radiation 10.0 10 < th dose independent rect. 1 23
287 37.87 radiation 10.0 90 < th dose dependent rect. 3 14
290 37.88 temperature 30.0 270 < th dose independent rect. 18 7
298 37.89 wind 9.0 43200 > th dose independent rect. 2 12
303 37.89 radiation 1.0 270 < th dose dependent rect. 18 7
306 37.90 wind 3.0 43200 > th dose independent rect. 6 1
308 37.90 precipitation 0.1 270 < th dose independent rect. 1 18
311 37.90 precipitation 0.1 270 < th dose dependent rect. 1 18
315 37.91 temperature 10.0 270 > th dose independent rect. 19 6
317 37.91 humidity 50.0 270 > th dose independent rect. 19 6
319 37.91 atmosphere 995.0 270 > th dose independent rect. 19 6
320 37.91 radiation 1.0 270 < th dose independent rect. 19 6
326 37.91 temperature 10.0 270 > th dose independent rect. 1 18
327 37.91 atmosphere 1015.0 270 < th dose independent rect. 1 18
340 37.92 wind 3.0 43200 < th dose independent rect. 6 1
344 37.92 radiation 1.0 10 > th dose independent rect. 7 9
345 37.92 radiation 30.0 270 < th dose independent rect. 24 9
346 37.92 temperature 15.0 270 > th dose independent rect. 9 15
351 37.93 precipitation 0.1 14400 > th dose independent rect. 14 3
356 37.93 radiation 10.0 10 > th dose independent rect. 9 23
357 37.93 precipitation 0.1 14400 > th dose dependent rect. 14 3
362 37.94 humidity 50.0 270 > th dose independent rect. 9 15
364 37.94 humidity 90.0 14400 > th dose dependent rect. 8 3
368 37.95 precipitation 0.1 14400 < th dose independent rect. 15 2
369 37.95 wind 1.0 270 > th dose independent rect. 19 6
373 37.95 precipitation 0.1 14400 < th dose dependent rect. 15 2
377 37.96 wind 9.0 270 < th dose independent rect. 19 6
382 37.96 wind 9.0 43200 > th dose dependent rect. 10 4
392 37.98 radiation 30.0 43200 > th dose independent rect. 11 1
404 37.99 humidity 90.0 14400 > th dose dependent rect. 7 7
407 38.00 precipitation 0.1 270 < th dose independent rect. 19 6
408 38.00 radiation 1.0 270 > th dose independent rect. 4 10
419 38.00 precipitation 0.1 270 < th dose dependent rect. 19 6
424 38.01 wind 9.0 14400 > th dose independent rect. 10 1
432 38.01 precipitation 0.1 270 < th dose independent rect. 24 20
434 38.01 precipitation 0.1 270 < th dose dependent rect. 24 20
443 38.03 atmosphere 1000.0 270 > th dose independent rect. 24 9
446 38.04 temperature 15.0 270 > th dose independent rect. 20 17
453 38.04 humidity 90.0 14400 > th dose dependent rect. 7 9
457 38.04 radiation 20.0 10 < th dose dependent rect. 23 23
459 38.05 wind 7.0 270 < th dose independent rect. 24 9
464 38.05 precipitation 0.1 14400 < th dose independent rect. 2 16
473 38.05 precipitation 0.1 14400 < th dose dependent rect. 2 16
491 38.06 precipitation 0.1 14400 > th dose independent rect. 2 16
506 38.07 precipitation 0.1 270 < th dose independent rect. 20 4
510 38.07 precipitation 0.1 270 < th dose dependent rect. 20 4
517 38.08 wind 9.0 14400 > th dose independent rect. 7 4
518 38.08 wind 9.0 43200 < th dose independent rect. 2 12
529 38.09 wind 9.0 43200 < th dose independent rect. 6 8
538 38.09 radiation 40.0 270 < th dose dependent rect. 24 9
557 38.12 temperature 30.0 270 < th dose independent rect. 24 9
585 38.13 wind 9.0 30 < th dose independent rect. 3 17
595 38.13 wind 1.0 43200 < th dose dependent rect. 1 1
614 38.14 precipitation 0.1 14400 > th dose dependent sin 2 NA
619 38.15 precipitation 0.1 270 < th dose independent rect. 24 9
651 38.15 precipitation 0.1 270 < th dose dependent rect. 24 9
656 38.16 precipitation 0.1 14400 > th dose independent sin 1 NA
657 38.16 precipitation 0.1 14400 < th dose independent sin 1 NA
658 38.16 precipitation 0.1 10 < th dose independent rect. 20 7
669 38.16 precipitation 0.1 14400 < th dose dependent sin 1 NA
672 38.16 precipitation 0.1 10 < th dose dependent rect. 20 7
688 38.18 temperature 10.0 10 > th dose independent rect. 20 7
690 38.18 temperature 30.0 10 < th dose independent rect. 20 7
691 38.18 humidity 50.0 10 > th dose independent rect. 20 7
694 38.18 atmosphere 995.0 10 > th dose independent rect. 20 7
695 38.18 radiation 1.0 10 < th dose independent rect. 20 7
701 38.18 temperature 10.0 270 > th dose independent rect. 24 9
702 38.18 humidity 50.0 270 > th dose independent rect. 24 9
704 38.18 atmosphere 1015.0 270 < th dose independent rect. 24 9
707 38.18 temperature 10.0 10 > th dose independent rect. 3 17
709 38.18 atmosphere 1015.0 10 < th dose independent rect. 3 17
716 38.18 radiation 1.0 10 < th dose dependent rect. 20 7
742 38.19 precipitation 0.1 14400 > th dose dependent rect. 24 20
744 38.20 wind 9.0 43200 < th dose independent rect. 12 2
746 38.20 wind 9.0 10 < th dose independent rect. 20 7
764 38.20 radiation 20.0 10 < th dose dependent rect. 21 23
767 38.21 precipitation 0.1 14400 < th dose independent rect. 14 6
780 38.21 wind 5.0 14400 < th dose dependent rect. 3 1
781 38.21 precipitation 0.1 14400 < th dose dependent rect. 14 6
788 38.22 radiation 20.0 30 < th dose independent rect. 12 8
799 38.23 precipitation 0.1 14400 > th dose independent rect. 14 6
800 38.23 wind 9.0 270 < th dose independent rect. 13 7
807 38.23 precipitation 0.1 10 < th dose independent rect. 3 17
815 38.23 precipitation 0.1 10 < th dose dependent rect. 3 17
836 38.25 wind 9.0 14400 < th dose independent rect. 6 5
840 38.25 humidity 70.0 270 > th dose independent rect. 24 9
904 38.27 radiation 30.0 43200 > th dose dependent rect. 11 1
921 38.28 precipitation 0.1 14400 > th dose independent rect. 5 15
937 38.29 precipitation 0.1 14400 > th dose independent rect. 7 13
940 38.29 humidity 50.0 270 > th dose independent rect. 5 20
945 38.29 radiation 40.0 10 < th dose dependent rect. 2 9