Os01g0589200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0589200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.44 | 0.434 | 7.9 | -2.49 | 1.02 | 0.587 | 0.477 | 4.64 | -0.375 | 2.05 | 1.142 | 4324 | -- | -- |
| 84.42 | 0.428 | 7.75 | -1.54 | 1.05 | 0.827 | 0.638 | -- | -0.0628 | 1.94 | 62.3 | 2922 | -- | -- |
| 85.6 | 0.431 | 7.9 | -2.46 | 1.02 | 0.597 | -- | 4.7 | -0.342 | 2.04 | 1.568 | 4370 | -- | -- |
| 85.5 | 0.431 | 7.76 | -1.55 | 1.03 | 0.834 | -- | -- | -0.0722 | 1.96 | 148.8 | 2938 | -- | -- |
| 113.38 | 0.496 | 7.87 | -2.08 | -- | 1.44 | -- | 4.88 | -0.2 | -- | 2.11 | 4675 | -- | -- |
| 106.05 | 0.483 | 7.79 | -1.53 | 0.989 | -- | 0.436 | -- | -0.205 | 2.02 | -- | -- | -- | -- |
| 106.78 | 0.484 | 7.79 | -1.55 | 0.989 | -- | -- | -- | -0.207 | 2.03 | -- | -- | -- | -- |
| 104.21 | 0.475 | 7.72 | -1.65 | -- | 1.61 | -- | -- | 0.0613 | -- | 7.217 | 3248 | -- | -- |
| 142.12 | 0.555 | 7.72 | -- | 1.01 | 1.2 | -- | -- | 0.166 | 0.347 | 225.7 | 2318 | -- | -- |
| 165.6 | 0.601 | 7.78 | -1.51 | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
| 169.81 | 0.61 | 7.75 | -- | 0.96 | -- | -- | -- | -0.0351 | 1.99 | -- | -- | -- | -- |
| 156.86 | 0.583 | 7.73 | -- | -- | 1.96 | -- | -- | 0.197 | -- | 4.398 | 3220 | -- | -- |
| 225.38 | 0.701 | 7.75 | -- | -- | -- | -- | -- | -0.0171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 2 | 74.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 3 | 74.74 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 5 | 76.15 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 6 | 76.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 7 | 76.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 8 | 76.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 9 | 76.48 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 11 | 76.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 12 | 76.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 13 | 76.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 7 |
| 14 | 76.58 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 15 | 76.60 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 18 | 76.66 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 19 | 76.66 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 5 |
| 24 | 76.71 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 8 | 3 |
| 25 | 76.72 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 29 | 76.74 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 6 |
| 30 | 76.74 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 37 | 76.78 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 39 | 76.80 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 6 |
| 71 | 77.04 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 2 |
| 80 | 77.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 84 | 77.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 85 | 77.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 90 | 77.13 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 91 | 77.13 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 94 | 77.14 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 99 | 77.17 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 101 | 77.18 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 3 |
| 103 | 77.18 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 3 |
| 104 | 77.19 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 141 | 77.39 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 9 |
| 194 | 77.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 200 | 77.70 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 247 | 77.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 258 | 78.09 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 274 | 78.20 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 275 | 78.20 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 279 | 78.20 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 283 | 78.22 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 288 | 78.25 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 302 | 78.35 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 14 |
| 303 | 78.37 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 308 | 78.39 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 309 | 78.40 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 310 | 78.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 323 | 78.45 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 344 | 78.55 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 379 | 78.76 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 6 |
| 381 | 78.77 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 383 | 78.78 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 2 |
| 397 | 78.88 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 410 | 78.92 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 426 | 78.99 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 443 | 79.05 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 454 | 79.10 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 466 | 79.10 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 470 | 79.12 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 473 | 79.12 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 510 | 79.20 | temperature | 25.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 513 | 79.20 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 22 | 13 |
| 514 | 79.20 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 20 | 15 |
| 523 | 79.23 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 525 | 79.23 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 16 | 17 |
| 541 | 79.29 | temperature | 25.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 549 | 79.30 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 562 | 79.33 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 13 | 6 |
| 577 | 79.37 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 579 | 79.37 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 8 |
| 580 | 79.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 588 | 79.39 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 596 | 79.41 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 603 | 79.42 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 617 | 79.44 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 618 | 79.44 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 629 | 79.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 631 | 79.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 639 | 79.48 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 644 | 79.49 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 650 | 79.51 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 662 | 79.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 663 | 79.53 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 673 | 79.55 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 721 | 79.63 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 722 | 79.63 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 22 | 11 |
| 731 | 79.64 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 752 | 79.68 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 20 | 13 |
| 778 | 79.72 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 806 | 79.80 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 847 | 79.89 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 923 | 80.01 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 16 |
| 926 | 80.01 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 16 |
| 933 | 80.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 945 | 80.04 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 954 | 80.05 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 16 |
| 974 | 80.08 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 977 | 80.08 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 979 | 80.08 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 22 | 12 |