Os01g0588700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF572 family protein.
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Os01g0588700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF572 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.25 | 0.143 | 11.3 | 0.37 | 0.289 | -0.147 | -0.284 | 1.6 | 0.0388 | 2.29 | 26.3 | 4107 | -- | -- |
| 10.39 | 0.151 | 11.3 | -0.0388 | 0.233 | -0.0701 | -0.251 | -- | -0.0472 | 2.19 | 25.5 | 9419 | -- | -- |
| 9.52 | 0.144 | 11.3 | 0.37 | 0.284 | -0.138 | -- | 1.55 | 0.0333 | 2.58 | 26.3 | 4277 | -- | -- |
| 10.28 | 0.15 | 11.3 | -0.0176 | 0.235 | -0.0933 | -- | -- | -0.0254 | 2.64 | 24.6 | 9670 | -- | -- |
| 12.87 | 0.168 | 11.3 | 0.0175 | -- | -0.177 | -- | 0.0621 | -0.0403 | -- | 26.9 | 4190 | -- | -- |
| 10.71 | 0.153 | 11.3 | -0.0535 | 0.286 | -- | -0.214 | -- | -0.0775 | 2.46 | -- | -- | -- | -- |
| 10.86 | 0.154 | 11.3 | -0.048 | 0.287 | -- | -- | -- | -0.0764 | 2.63 | -- | -- | -- | -- |
| 12.81 | 0.167 | 11.3 | 0.0196 | -- | -0.184 | -- | -- | 0.0285 | -- | 24.6 | 9670 | -- | -- |
| 10.29 | 0.15 | 11.3 | -- | 0.233 | -0.0955 | -- | -- | -0.0224 | 2.63 | 24.6 | 9670 | -- | -- |
| 15.68 | 0.185 | 11.3 | -0.0358 | -- | -- | -- | -- | -0.0691 | -- | -- | -- | -- | -- |
| 10.92 | 0.155 | 11.3 | -- | 0.286 | -- | -- | -- | -0.071 | 2.63 | -- | -- | -- | -- |
| 12.82 | 0.167 | 11.3 | -- | -- | -0.182 | -- | -- | 0.0254 | -- | 24.6 | 9670 | -- | -- |
| 15.71 | 0.185 | 11.3 | -- | -- | -- | -- | -- | -0.0652 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.86 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 19 |
| 2 | 7.93 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 37 | 8.48 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 47 | 8.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 51 | 8.56 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 54 | 8.56 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 5 | 13 |
| 61 | 8.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 65 | 8.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 66 | 8.59 | wind | 5.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 67 | 8.59 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 69 | 8.59 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 74 | 8.60 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 76 | 8.60 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 77 | 8.60 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 78 | 8.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 79 | 8.60 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 83 | 8.60 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 86 | 8.61 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 19 |
| 91 | 8.61 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 94 | 8.61 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 96 | 8.62 | wind | 7.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 97 | 8.62 | wind | 7.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 99 | 8.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 101 | 8.62 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 102 | 8.62 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 105 | 8.62 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 107 | 8.62 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 120 | 8.62 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 121 | 8.62 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 122 | 8.62 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 125 | 8.63 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 127 | 8.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 128 | 8.63 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 131 | 8.63 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 132 | 8.63 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 134 | 8.63 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 137 | 8.63 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 2 |
| 154 | 8.63 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 4 | 5 |
| 162 | 8.63 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 163 | 8.63 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 166 | 8.63 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 168 | 8.63 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 169 | 8.63 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 178 | 8.64 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 179 | 8.64 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 193 | 8.65 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 213 | 8.67 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 11 |
| 236 | 8.71 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 237 | 8.71 | wind | 9.0 | 10 | < th | dose independent | rect. | 9 | 20 |
| 238 | 8.71 | temperature | 15.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 244 | 8.72 | wind | 5.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 247 | 8.72 | temperature | 10.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 249 | 8.72 | temperature | 30.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 250 | 8.72 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 252 | 8.72 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 253 | 8.72 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 254 | 8.72 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 4 |
| 255 | 8.72 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 5 | 4 |
| 258 | 8.72 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 279 | 8.73 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 293 | 8.74 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 9 | 20 |
| 297 | 8.74 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 298 | 8.74 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 299 | 8.74 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 306 | 8.74 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 312 | 8.75 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 340 | 8.76 | wind | 9.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 341 | 8.76 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 5 | 4 |
| 355 | 8.77 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 367 | 8.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 390 | 8.79 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 5 | 4 |
| 394 | 8.79 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 448 | 8.82 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 9 | 20 |
| 491 | 8.84 | humidity | 60.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 515 | 8.84 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 694 | 8.91 | temperature | 25.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 714 | 8.91 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 14 |
| 814 | 8.95 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 829 | 8.95 | humidity | 60.0 | 10 | > th | dose independent | rect. | 5 | 13 |
| 832 | 8.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 855 | 8.96 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 954 | 8.97 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 6 |