Os01g0588600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF572 family protein.
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Os01g0588600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF572 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 341.31 | 0.868 | 3.51 | 0.715 | 0.596 | -1.99 | -0.668 | 1.55 | 0.23 | 17.8 | 18.62 | 520 | -- | -- |
| 342.65 | 0.862 | 3.55 | 0.424 | 0.567 | -2.09 | -0.222 | -- | 0.156 | 17.9 | 16.7 | 520 | -- | -- |
| 342.33 | 0.862 | 3.51 | 0.717 | 0.591 | -1.98 | -- | 1.47 | 0.22 | 17.8 | 18.7 | 517 | -- | -- |
| 342.84 | 0.862 | 3.55 | 0.442 | 0.575 | -2.11 | -- | -- | 0.149 | 17.9 | 16.65 | 519 | -- | -- |
| 348.76 | 0.87 | 3.51 | 0.669 | -- | -1.69 | -- | 1.03 | 0.165 | -- | 16.82 | 965 | -- | -- |
| 405.25 | 0.944 | 3.61 | -0.0892 | 0.024 | -- | 0.754 | -- | -0.197 | 5.6 | -- | -- | -- | -- |
| 405.27 | 0.943 | 3.61 | -0.0817 | 0.151 | -- | -- | -- | -0.199 | 10.8 | -- | -- | -- | -- |
| 349.2 | 0.87 | 3.54 | 0.453 | -- | -1.72 | -- | -- | 0.121 | -- | 16.21 | 1097 | -- | -- |
| 347.31 | 0.868 | 3.56 | -- | 0.53 | -1.86 | -- | -- | 0.0742 | 17.7 | 17.57 | 508 | -- | -- |
| 406.69 | 0.942 | 3.61 | -0.0848 | -- | -- | -- | -- | -0.2 | -- | -- | -- | -- | -- |
| 405.45 | 0.942 | 3.61 | -- | 0.152 | -- | -- | -- | -0.19 | 10.8 | -- | -- | -- | -- |
| 353.51 | 0.876 | 3.56 | -- | -- | -1.57 | -- | -- | 0.0328 | -- | 16.6 | 876 | -- | -- |
| 406.88 | 0.942 | 3.61 | -- | -- | -- | -- | -- | -0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 337.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 8 | 338.72 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 16 | 339.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 18 | 339.71 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 44 | 341.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 6 |
| 92 | 342.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 94 | 342.03 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 119 | 342.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 22 |
| 130 | 342.44 | temperature | 20 | 1440 | > th | dose dependent | sin | 12 | NA |
| 134 | 342.51 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 194 | 343.16 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 235 | 343.63 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 258 | 343.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 22 |
| 266 | 344.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 357 | 344.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 22 |
| 368 | 344.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 409 | 345.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 20 |
| 484 | 345.45 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 524 | 345.58 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 539 | 345.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 600 | 345.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 639 | 346.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 643 | 346.06 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 644 | 346.07 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 658 | 346.09 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 687 | 346.18 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 714 | 346.24 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 803 | 346.45 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 818 | 346.49 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 884 | 346.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 5 |