Os01g0587000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 KDa accessory protein) (DVA41).
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Os01g0587000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Vacuolar ATP synthase subunit d (EC 3.6.3.14) (V-ATPase d subunit) (Vacuolar proton pump d subunit) (V-ATPase 41 KDa accessory protein) (DVA41).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.19 | 0.183 | 12.8 | -0.492 | 0.388 | 0.77 | -0.0422 | -0.0388 | -0.0722 | 8.43 | 6.808 | 487 | -- | -- |
| 15.19 | 0.182 | 12.8 | -0.486 | 0.387 | 0.769 | -0.0375 | -- | -0.0707 | 8.43 | 7.05 | 486 | -- | -- |
| 15.19 | 0.182 | 12.8 | -0.488 | 0.388 | 0.772 | -- | -0.0108 | -0.0714 | 8.42 | 6.44 | 483 | -- | -- |
| 15.19 | 0.182 | 12.8 | -0.487 | 0.388 | 0.771 | -- | -- | -0.0707 | 8.43 | 6.227 | 486 | -- | -- |
| 18.83 | 0.203 | 12.8 | -0.44 | -- | 0.656 | -- | -0.0366 | -0.0458 | -- | 6.44 | 483 | -- | -- |
| 21.96 | 0.22 | 12.8 | -0.31 | 0.227 | -- | -0.0608 | -- | 0.0441 | 10.1 | -- | -- | -- | -- |
| 21.97 | 0.22 | 12.8 | -0.312 | 0.227 | -- | -- | -- | 0.044 | 10.2 | -- | -- | -- | -- |
| 18.83 | 0.203 | 12.8 | -0.435 | -- | 0.656 | -- | -- | -0.0444 | -- | 6.227 | 486 | -- | -- |
| 20.77 | 0.212 | 12.8 | -- | 0.327 | 0.549 | -- | -- | 0.012 | 8.66 | 14.2 | 431 | -- | -- |
| 25.09 | 0.234 | 12.8 | -0.315 | -- | -- | -- | -- | 0.0436 | -- | -- | -- | -- | -- |
| 24.54 | 0.232 | 12.8 | -- | 0.228 | -- | -- | -- | 0.0788 | 10.3 | -- | -- | -- | -- |
| 23.54 | 0.227 | 12.8 | -- | -- | 0.52 | -- | -- | 0.0193 | -- | 6.227 | 486 | -- | -- |
| 27.71 | 0.246 | 12.8 | -- | -- | -- | -- | -- | 0.0786 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.57 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 3 | 14.74 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 12 | 14.88 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 19 | 15.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 26 | 15.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 20 |
| 38 | 15.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 17 |
| 46 | 15.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 75 | 15.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 92 | 15.33 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 22 |
| 133 | 15.40 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 139 | 15.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 21 |
| 168 | 15.46 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 197 | 15.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 303 | 15.60 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 318 | 15.62 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 343 | 15.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 15 |
| 405 | 15.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 16 |
| 453 | 15.73 | temperature | 10 | 1440 | > th | dose dependent | sin | 3 | NA |
| 483 | 15.75 | temperature | 10 | 720 | > th | dose dependent | sin | 12 | NA |
| 545 | 15.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 17 |