Os01g0567200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0567200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 567.44 | 1.12 | 4.69 | -0.0449 | 1.66 | -2.98 | 1.34 | 8.71 | 0.812 | 5.14 | 8.8 | 608 | -- | -- |
| 572.92 | 1.11 | 4.78 | 0.273 | 1.6 | -4.16 | 1.59 | -- | 0.821 | 4.96 | 8.5 | 582 | -- | -- |
| 570.66 | 1.11 | 4.69 | -0.0391 | 1.68 | -3.07 | -- | 9.35 | 0.807 | 5.19 | 8.799 | 583 | -- | -- |
| 572.83 | 1.11 | 4.75 | 0.0944 | 1.66 | -4.86 | -- | -- | 0.791 | 5.3 | 8.566 | 595 | -- | -- |
| 716.71 | 1.25 | 4.71 | -0.0177 | -- | -2.52 | -- | 8.87 | 0.838 | -- | 8.8 | 608 | -- | -- |
| 667.09 | 1.21 | 4.77 | -0.353 | 1.52 | -- | 1.98 | -- | 0.639 | 4.91 | -- | -- | -- | -- |
| 677.17 | 1.22 | 4.78 | -0.359 | 1.53 | -- | -- | -- | 0.629 | 4.86 | -- | -- | -- | -- |
| 710.31 | 1.24 | 4.79 | 0.226 | -- | -3.58 | -- | -- | 0.812 | -- | 9.1 | 931 | -- | -- |
| 571.8 | 1.11 | 4.73 | -- | 1.68 | -5.02 | -- | -- | 0.789 | 5.2 | 8.566 | 575 | -- | -- |
| 801.36 | 1.32 | 4.79 | -0.302 | -- | -- | -- | -- | 0.668 | -- | -- | -- | -- | -- |
| 680.56 | 1.22 | 4.77 | -- | 1.53 | -- | -- | -- | 0.669 | 4.87 | -- | -- | -- | -- |
| 709.53 | 1.24 | 4.75 | -- | -- | -3.83 | -- | -- | 0.835 | -- | 9.008 | 918 | -- | -- |
| 803.77 | 1.32 | 4.78 | -- | -- | -- | -- | -- | 0.702 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 557.38 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 4 |
| 2 | 557.66 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 3 |
| 14 | 564.50 | wind | 9 | 720 | > th | dose independent | rect. | 18 | 22 |
| 22 | 567.26 | wind | 9 | 720 | > th | dose dependent | rect. | 18 | 22 |
| 36 | 570.18 | wind | 7 | 270 | > th | dose dependent | rect. | 11 | 21 |
| 38 | 570.21 | wind | 7 | 270 | > th | dose dependent | rect. | 11 | 18 |
| 51 | 571.63 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 15 |
| 93 | 573.39 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 127 | 574.73 | wind | 9 | 720 | > th | dose independent | sin | 0 | NA |
| 136 | 574.94 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 15 |
| 155 | 575.09 | wind | 9 | 720 | > th | dose independent | rect. | 11 | 12 |
| 171 | 575.28 | wind | 9 | 720 | < th | dose independent | no | NA | NA |
| 174 | 575.34 | wind | 9 | 720 | < th | dose independent | sin | 1 | NA |
| 182 | 575.73 | wind | 9 | 720 | > th | dose independent | no | NA | NA |
| 198 | 575.73 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 22 |
| 271 | 576.50 | wind | 9 | 720 | > th | dose dependent | sin | 22 | NA |
| 322 | 577.19 | wind | 9 | 720 | > th | dose dependent | no | NA | NA |
| 338 | 577.19 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 466 | 578.43 | wind | 9 | 720 | > th | dose independent | rect. | 15 | 23 |
| 471 | 578.53 | wind | 9 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 530 | 579.15 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 568 | 579.57 | wind | 7 | 270 | > th | dose dependent | sin | 17 | NA |
| 592 | 579.92 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 3 |
| 628 | 580.50 | wind | 9 | 720 | < th | dose independent | rect. | 3 | 15 |
| 776 | 581.62 | wind | 9 | 270 | > th | dose independent | sin | 10 | NA |
| 833 | 582.04 | wind | 9 | 720 | > th | dose independent | sin | 8 | NA |