FiT-DB / Search/ Help/ Sample detail

Os01g0566100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.57 (0.0255) R2 : 0.896
β1 : 0.924 (0.0932) R2dD : 0.0231 R2D : 0.009
β2 : 7.48 (0.121) R2dC : 2.94 R2C : -0.942
β3 : 5.23 (0.108) R2dE : 1.81 R2E : -2.05
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.254 (0.0543) R2dN8 : 0.00667 R2N8 : -0.0103
σ : 0.476
deviance : 104.36
__
_____
C
peak time of C : 17
E
wheather : radiation
threshold : 0.242
memory length : 418
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 6.66
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
105.49 0.483 9.56 0.931 7.16 4.86 -0.295 -0.648 0.254 17.1 0.05991 394 6.25 --
106.11 0.48 9.56 0.907 7.23 4.91 -0.0258 -- 0.253 17.1 0.2316 393 6.22 --
105.16 0.478 9.56 0.929 7.19 4.92 -- -0.47 0.258 17.1 0.222 393 6.3 --
104.36 0.476 9.57 0.924 7.48 5.23 -- -- 0.254 17 0.242 418 6.66 --
220.83 0.696 9.45 0.761 -- 3.6 -- -0.272 0.209 -- 77.32 1576 9.84 --
158.21 0.59 9.57 0.753 3.89 -- -0.325 -- 0.184 20.1 -- -- -- --
158.53 0.59 9.57 0.762 3.89 -- -- -- 0.183 20.1 -- -- -- --
154.3 0.579 9.43 0.809 -- 4.32 -- -- 0.308 -- 492.1 2109 15.6 --
125.94 0.523 9.59 -- 7.53 5.24 -- -- 0.156 17.1 0.5794 411 6.4 --
987.55 1.47 9.47 0.728 -- -- -- -- 0.136 -- -- -- -- --
173.82 0.617 9.59 -- 3.88 -- -- -- 0.0986 20.1 -- -- -- --
170.41 0.608 9.46 -- -- 4.19 -- -- 0.184 -- 684.3 2119 15.6 --
1001.55 1.48 9.49 -- -- -- -- -- 0.0557 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 102.28 temperature 10.0 270 > th dose dependent rect. 3 7
7 108.93 precipitation 0.1 270 < th dose independent rect. 2 9
8 108.93 precipitation 0.1 270 < th dose dependent rect. 2 9
12 110.04 humidity 50.0 270 > th dose independent rect. 2 9
16 111.05 wind 9.0 270 < th dose independent rect. 2 9
17 111.12 temperature 10.0 270 > th dose independent rect. 2 9
18 111.12 atmosphere 995.0 270 > th dose independent rect. 2 9
19 111.12 atmosphere 1015.0 270 < th dose independent rect. 2 9
20 111.12 temperature 10.0 270 > th dose independent rect. 11 15
23 111.60 wind 9.0 270 < th dose independent rect. 11 15
24 112.06 radiation 1.0 270 < th dose dependent rect. 21 19
31 112.55 radiation 40.0 270 < th dose independent rect. 15 7
33 112.58 temperature 10.0 270 > th dose dependent rect. 4 18
34 112.61 temperature 10.0 270 > th dose independent rect. 15 7
35 112.61 temperature 10.0 270 > th dose independent rect. 22 17
36 112.67 atmosphere 995.0 270 > th dose independent rect. 22 17
37 112.77 temperature 20.0 270 > th dose independent rect. 4 6
38 112.77 temperature 10.0 10 > th dose dependent rect. 5 8
39 112.82 precipitation 0.1 270 < th dose independent rect. 15 7
40 112.82 precipitation 0.1 270 < th dose dependent rect. 15 7
43 112.99 wind 9.0 270 < th dose independent rect. 22 17
48 113.50 wind 9.0 270 < th dose independent rect. 15 7
53 113.76 atmosphere 1015.0 270 < th dose independent rect. 22 17
62 114.19 wind 1.0 270 > th dose independent rect. 15 7
64 114.36 radiation 1.0 90 < th dose dependent rect. 23 18
65 114.39 precipitation 0.1 270 < th dose independent rect. 11 15
66 114.39 precipitation 0.1 270 < th dose dependent rect. 11 15
70 114.49 radiation 20.0 270 < th dose independent rect. 17 16
79 114.67 radiation 1.0 270 < th dose dependent rect. 21 12
85 114.81 humidity 50.0 270 > th dose dependent rect. 21 7
88 114.98 humidity 50.0 270 > th dose dependent rect. 22 5
92 115.18 precipitation 0.1 270 < th dose independent rect. 22 17
93 115.18 precipitation 0.1 270 < th dose dependent rect. 22 17
97 115.32 radiation 1.0 270 < th dose dependent rect. 21 10
109 115.65 radiation 1.0 90 < th dose independent rect. 23 18
125 116.22 precipitation 0.1 270 < th dose independent rect. 4 17
126 116.22 precipitation 0.1 270 < th dose dependent rect. 4 17
130 116.33 precipitation 0.1 270 < th dose independent rect. 3 19
131 116.33 precipitation 0.1 270 < th dose dependent rect. 3 19
133 116.36 temperature 10.0 10 > th dose dependent rect. 5 19
136 116.51 radiation 1.0 270 < th dose independent rect. 21 19
142 116.63 humidity 80.0 270 > th dose independent rect. 22 5
143 116.64 temperature 10.0 270 > th dose independent rect. 21 7
144 116.64 temperature 30.0 270 < th dose independent rect. 21 7
145 116.64 humidity 50.0 270 > th dose independent rect. 21 7
148 116.64 atmosphere 995.0 270 > th dose independent rect. 21 7
149 116.64 radiation 1.0 270 < th dose independent rect. 21 7
154 116.64 temperature 10.0 270 > th dose independent rect. 4 17
155 116.64 radiation 1.0 270 < th dose dependent rect. 21 7
160 116.65 radiation 40.0 270 < th dose dependent rect. 17 16
161 116.68 wind 9.0 270 < th dose independent rect. 21 7
171 116.83 atmosphere 995.0 270 > th dose independent rect. 15 7
175 116.88 atmosphere 1015.0 270 < th dose independent rect. 15 7
176 116.95 precipitation 0.1 270 < th dose independent rect. 17 16
177 116.95 precipitation 0.1 270 < th dose dependent rect. 17 16
194 117.30 atmosphere 995.0 270 > th dose independent rect. 11 16
207 117.67 temperature 15.0 270 > th dose independent rect. 3 19
208 117.69 wind 9.0 270 < th dose independent rect. 4 17
209 117.69 atmosphere 1015.0 270 < th dose independent rect. 4 17
211 117.76 temperature 10.0 270 > th dose independent rect. 22 5
212 117.76 temperature 30.0 270 < th dose independent rect. 22 5
213 117.76 humidity 50.0 270 > th dose independent rect. 22 5
216 117.76 atmosphere 995.0 270 > th dose independent rect. 22 5
217 117.76 radiation 1.0 270 < th dose independent rect. 22 5
222 117.76 humidity 50.0 270 > th dose independent rect. 22 18
224 117.76 radiation 1.0 270 < th dose dependent rect. 22 5
232 117.80 wind 9.0 270 < th dose independent rect. 22 5
237 117.83 radiation 40.0 270 < th dose dependent rect. 15 7
238 117.87 humidity 50.0 10 > th dose independent rect. 5 8
246 118.01 radiation 1.0 90 < th dose dependent rect. 23 9
249 118.04 temperature 30.0 270 < th dose independent rect. 3 7
258 118.13 precipitation 0.1 270 < th dose independent rect. 22 5
260 118.13 precipitation 0.1 270 < th dose dependent rect. 22 5
261 118.18 radiation 40.0 270 < th dose independent rect. 3 8
265 118.21 radiation 1.0 90 < th dose dependent rect. 23 12
273 118.36 temperature 10.0 270 > th dose independent rect. 9 8
274 118.36 atmosphere 1015.0 270 < th dose independent rect. 9 8
275 118.36 temperature 10.0 270 > th dose independent rect. 17 16
276 118.46 wind 9.0 270 < th dose independent rect. 9 8
281 118.56 precipitation 0.1 270 < th dose independent rect. 21 7
282 118.56 temperature 10.0 270 > th dose dependent rect. 16 6
283 118.56 precipitation 0.1 270 < th dose dependent rect. 21 7
290 118.70 wind 9.0 270 < th dose independent rect. 17 16
293 118.76 wind 9.0 270 < th dose independent rect. 3 19
303 118.96 radiation 1.0 270 < th dose independent rect. 21 10
306 118.96 humidity 50.0 270 > th dose independent rect. 11 16
307 118.96 humidity 60.0 270 > th dose dependent rect. 23 3
310 119.01 humidity 80.0 270 > th dose independent rect. 23 3
313 119.02 precipitation 0.1 270 < th dose independent rect. 9 8
314 119.02 precipitation 0.1 270 < th dose dependent rect. 9 8
361 119.29 atmosphere 1015.0 270 < th dose independent rect. 22 5
367 119.38 radiation 1.0 90 < th dose independent rect. 23 8
379 119.59 radiation 1.0 90 < th dose independent rect. 23 12
420 119.93 temperature 10.0 270 > th dose dependent rect. 22 5
431 120.12 atmosphere 995.0 270 > th dose independent rect. 17 16
439 120.24 radiation 1.0 30 > th dose independent rect. 5 8
451 120.29 atmosphere 995.0 270 > th dose independent rect. 9 7
455 120.30 wind 9.0 270 < th dose dependent rect. 3 8
459 120.35 temperature 20.0 270 > th dose independent rect. 23 3
465 120.46 atmosphere 1015.0 270 < th dose independent rect. 3 19
473 120.50 precipitation 0.1 270 < th dose independent rect. 2 21
474 120.50 precipitation 0.1 270 < th dose dependent rect. 2 21
477 120.54 radiation 1.0 30 > th dose independent rect. 17 20
484 120.63 temperature 20.0 270 > th dose independent rect. 22 5
485 120.63 atmosphere 1015.0 270 < th dose independent rect. 21 7
518 120.82 humidity 50.0 270 > th dose dependent rect. 3 8
522 120.87 humidity 50.0 270 > th dose independent rect. 17 16
538 121.07 temperature 10.0 270 > th dose dependent rect. 16 18
543 121.15 temperature 15.0 10 > th dose independent rect. 17 7
551 121.29 wind 9.0 270 < th dose dependent rect. 15 7
588 121.62 temperature 10.0 270 > th dose dependent rect. 23 3
590 121.65 wind 9.0 10 < th dose independent rect. 5 8
609 121.73 temperature 10.0 270 > th dose independent rect. 23 3
610 121.73 temperature 30.0 270 < th dose independent rect. 23 3
611 121.73 humidity 50.0 270 > th dose independent rect. 23 3
614 121.73 atmosphere 995.0 270 > th dose independent rect. 23 3
615 121.73 radiation 1.0 270 < th dose independent rect. 23 3
622 121.73 temperature 10.0 270 > th dose independent rect. 2 21
623 121.73 radiation 1.0 270 < th dose dependent rect. 23 3
634 121.77 wind 9.0 270 < th dose independent rect. 23 3
635 121.78 precipitation 0.1 10 < th dose independent rect. 5 8
638 121.78 precipitation 0.1 10 < th dose dependent rect. 5 8
646 121.88 radiation 10.0 10 < th dose independent rect. 17 7
659 121.98 precipitation 0.1 270 < th dose independent rect. 23 3
661 121.98 precipitation 0.1 270 < th dose dependent rect. 23 3
662 121.99 temperature 10.0 270 > th dose dependent rect. 17 4
676 122.04 radiation 1.0 270 < th dose dependent sin 11 NA
681 122.05 temperature 10.0 10 > th dose independent rect. 5 8
683 122.05 atmosphere 995.0 10 > th dose independent rect. 5 8
684 122.05 atmosphere 1015.0 10 < th dose independent rect. 5 8
685 122.05 temperature 10.0 10 > th dose independent rect. 13 16
688 122.08 atmosphere 995.0 270 > th dose independent rect. 4 17
689 122.08 wind 9.0 270 < th dose dependent rect. 22 5
713 122.22 radiation 40.0 10 < th dose dependent rect. 17 7
721 122.30 wind 1.0 270 > th dose independent rect. 9 7
725 122.34 atmosphere 1015.0 270 < th dose independent rect. 23 3
729 122.36 humidity 50.0 270 > th dose independent rect. 21 20
740 122.39 temperature 10.0 10 > th dose independent rect. 24 17
741 122.39 radiation 40.0 270 < th dose independent rect. 3 19
745 122.40 wind 9.0 10 < th dose independent rect. 13 16
748 122.42 atmosphere 1015.0 10 < th dose independent rect. 24 17
754 122.47 wind 9.0 10 < th dose independent rect. 17 7
760 122.51 temperature 10.0 270 > th dose dependent rect. 17 16
770 122.61 radiation 1.0 30 > th dose independent sin 6 NA
775 122.62 atmosphere 995.0 270 > th dose independent rect. 3 19
783 122.75 precipitation 0.1 10 < th dose independent rect. 17 7
794 122.75 precipitation 0.1 10 < th dose dependent rect. 17 7
811 122.89 radiation 1.0 30 < th dose dependent sin 5 NA
825 123.01 wind 9.0 270 < th dose independent rect. 2 21
831 123.05 atmosphere 995.0 10 > th dose independent rect. 24 17
835 123.10 humidity 50.0 10 > th dose independent rect. 17 7
837 123.15 wind 9.0 270 < th dose dependent rect. 16 5
843 123.18 humidity 50.0 270 > th dose independent rect. 17 4
854 123.25 atmosphere 1015.0 270 < th dose independent rect. 11 15
856 123.26 atmosphere 1015.0 270 < th dose independent rect. 10 17
859 123.27 atmosphere 995.0 10 > th dose independent rect. 17 7
894 123.36 radiation 1.0 30 < th dose independent sin 5 NA
895 123.36 wind 9.0 10 < th dose independent rect. 24 17
909 123.45 wind 9.0 270 < th dose dependent rect. 23 3
950 123.55 atmosphere 995.0 10 > th dose independent rect. 13 16