Os01g0565600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF866, eukaryotic family protein.
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Os01g0565600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF866, eukaryotic family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.63 | 0.173 | 13.1 | -0.212 | 0.455 | -0.511 | -0.204 | -1.3 | -0.000845 | 15.2 | 19.35 | 530 | -- | -- |
| 14.78 | 0.179 | 13 | 0.049 | 0.483 | -0.573 | -0.317 | -- | 0.0712 | 15.4 | 21.47 | 509 | -- | -- |
| 13.71 | 0.172 | 13.1 | -0.227 | 0.467 | -0.51 | -- | -1.33 | -0.00652 | 15.1 | 19.25 | 478 | -- | -- |
| 15.11 | 0.181 | 13.1 | 0.0379 | 0.498 | -0.579 | -- | -- | 0.0664 | 15.2 | 21.67 | 467 | -- | -- |
| 20.29 | 0.21 | 13.1 | -0.146 | -- | -0.557 | -- | -0.908 | 0.0193 | -- | 18.71 | 1000 | -- | -- |
| 21.42 | 0.217 | 13.1 | -0.0864 | 0.374 | -- | -0.223 | -- | -0.029 | 13.7 | -- | -- | -- | -- |
| 21.6 | 0.218 | 13.1 | -0.0938 | 0.373 | -- | -- | -- | -0.0305 | 13.5 | -- | -- | -- | -- |
| 20.8 | 0.212 | 13 | 0.0627 | -- | -0.549 | -- | -- | 0.0744 | -- | 21.97 | 1051 | -- | -- |
| 15.15 | 0.181 | 13 | -- | 0.499 | -0.577 | -- | -- | 0.0627 | 15.2 | 21.74 | 464 | -- | -- |
| 30.13 | 0.257 | 13.1 | -0.109 | -- | -- | -- | -- | -0.0386 | -- | -- | -- | -- | -- |
| 21.83 | 0.219 | 13.1 | -- | 0.375 | -- | -- | -- | -0.0201 | 13.5 | -- | -- | -- | -- |
| 20.89 | 0.213 | 13 | -- | -- | -0.531 | -- | -- | 0.0594 | -- | 22.17 | 1052 | -- | -- |
| 30.45 | 0.258 | 13.1 | -- | -- | -- | -- | -- | -0.0265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.86 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 2 | 13.89 | temperature | 15 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 4 | 13.90 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 6 | 13.91 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 7 | 13.92 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 11 | 13.92 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 13 | 13.93 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 21 | 13.94 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 23 | 13.94 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 56 | 14.00 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 176 | 14.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 200 | 14.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 201 | 14.26 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 230 | 14.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 235 | 14.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 254 | 14.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 261 | 14.32 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 273 | 14.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 615 | 14.84 | temperature | 20 | 720 | > th | dose dependent | sin | 2 | NA |
| 725 | 15.01 | temperature | 20 | 720 | > th | dose dependent | sin | 17 | NA |
| 747 | 15.04 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 19 |
| 749 | 15.04 | temperature | 25 | 720 | > th | dose independent | rect. | 3 | 21 |
| 828 | 15.13 | temperature | 25 | 720 | > th | dose independent | rect. | 23 | 23 |
| 860 | 15.16 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 23 |
| 866 | 15.17 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 23 |
| 867 | 15.17 | temperature | 25 | 720 | < th | dose independent | rect. | 13 | 23 |
| 884 | 15.18 | temperature | 25 | 720 | < th | dose independent | rect. | 20 | 23 |
| 892 | 15.19 | temperature | 25 | 720 | > th | dose independent | rect. | 21 | 23 |
| 893 | 15.19 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 23 |
| 903 | 15.20 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |
| 904 | 15.20 | temperature | 25 | 720 | < th | dose independent | no | NA | NA |
| 908 | 15.20 | temperature | 25 | 720 | < th | dose independent | rect. | 24 | 23 |