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Os01g0558300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : RWD domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0127) R2 : 4.76e-05
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00394 (0.0267) R2dN8 : 6.15e-05 R2N8 : 4.76e-05
σ : 0.239
deviance : 26.22
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.78 0.224 11.9 -0.167 0.00356 -0.322 -0.503 0.594 -0.156 5.67 90 4711 -- --
23.39 0.225 11.9 -0.151 0.00638 -0.31 0.526 -- -0.151 17.3 90 4647 -- --
23.38 0.225 11.9 -0.164 0.00698 -0.334 -- 0.522 -0.154 3.85 90 4711 -- --
23.68 0.227 11.9 -0.0989 0.026 -0.372 -- -- -0.165 2.4 90.03 4706 -- --
23.39 0.225 11.9 -0.159 -- -0.333 -- 0.511 -0.157 -- 90 4707 -- --
24.99 0.234 11.9 -0.151 0.0271 -- 0.477 -- -0.0223 17.6 -- -- -- --
25.51 0.237 11.9 -0.154 0.0398 -- -- -- -0.0206 20.3 -- -- -- --
23.68 0.227 11.9 -0.0852 -- -0.339 -- -- -0.146 -- 90.11 4707 -- --
23.83 0.227 11.9 -- 0.0241 -0.368 -- -- -0.148 0.251 90.05 4707 -- --
25.6 0.236 11.9 -0.154 -- -- -- -- -0.021 -- -- -- -- --
26.13 0.239 11.9 -- 0.0407 -- -- -- -0.00346 20 -- -- -- --
23.86 0.228 11.9 -- -- -0.365 -- -- -0.146 -- 90.06 4707 -- --
26.22 0.239 11.9 -- -- -- -- -- -0.00394 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.49 wind 1.0 43200 > th dose dependent rect. 1 2
2 21.62 wind 9.0 43200 < th dose dependent rect. 1 2
4 21.73 temperature 10.0 270 > th dose dependent rect. 19 16
5 21.79 temperature 10.0 90 > th dose dependent rect. 19 19
9 21.84 wind 3.0 43200 > th dose independent rect. 1 2
11 21.85 wind 3.0 43200 > th dose independent rect. 23 5
14 21.86 temperature 10.0 270 > th dose dependent rect. 5 8
16 21.89 temperature 10.0 270 > th dose dependent rect. 17 21
19 21.92 wind 1.0 43200 > th dose dependent rect. 23 5
24 21.94 wind 1.0 43200 > th dose dependent rect. 22 7
32 21.96 radiation 20.0 4320 > th dose dependent rect. 16 16
34 21.97 wind 3.0 43200 < th dose independent rect. 1 2
40 22.02 wind 3.0 43200 < th dose independent rect. 23 4
41 22.02 wind 9.0 43200 < th dose dependent rect. 23 5
42 22.02 wind 9.0 43200 < th dose dependent rect. 22 7
77 22.17 wind 9.0 14400 > th dose dependent rect. 4 9
78 22.18 wind 9.0 14400 < th dose independent rect. 2 11
83 22.18 wind 9.0 14400 > th dose dependent rect. 23 14
85 22.19 temperature 25.0 14400 > th dose independent rect. 11 1
92 22.20 radiation 20.0 4320 > th dose dependent rect. 6 2
113 22.23 wind 3.0 1440 < th dose dependent rect. 8 1
115 22.24 wind 9.0 43200 > th dose independent rect. 10 3
117 22.24 wind 9.0 14400 > th dose independent rect. 23 14
123 22.26 temperature 25.0 14400 < th dose independent rect. 11 1
126 22.26 wind 9.0 14400 < th dose independent rect. 23 14
133 22.29 wind 9.0 14400 > th dose independent rect. 3 10
139 22.29 temperature 10.0 10 > th dose dependent rect. 8 16
149 22.32 wind 7.0 43200 > th dose dependent rect. 10 3
161 22.34 wind 9.0 43200 < th dose independent rect. 10 3
165 22.34 temperature 10.0 10 > th dose dependent rect. 20 18
183 22.37 wind 1.0 270 > th dose independent rect. 10 9
213 22.41 wind 9.0 14400 < th dose independent sin 6 NA
217 22.41 radiation 30.0 4320 > th dose independent rect. 16 16
218 22.41 temperature 20.0 270 > th dose independent rect. 6 17
235 22.43 radiation 30.0 4320 < th dose independent rect. 20 12
236 22.43 humidity 50.0 270 > th dose independent rect. 6 17
242 22.44 radiation 30.0 4320 > th dose independent rect. 7 1
267 22.45 wind 7.0 43200 < th dose independent rect. 11 1
296 22.47 wind 9.0 270 < th dose dependent rect. 6 17
300 22.48 wind 5.0 90 < th dose independent rect. 19 8
306 22.49 wind 9.0 14400 > th dose independent sin 7 NA
323 22.50 radiation 30.0 4320 < th dose independent rect. 6 2
343 22.51 wind 9.0 14400 > th dose independent rect. 5 6
378 22.53 radiation 10.0 4320 < th dose dependent rect. 9 1
380 22.53 temperature 10.0 90 > th dose dependent rect. 19 8
391 22.54 humidity 60.0 270 > th dose independent rect. 18 17
393 22.54 humidity 80.0 14400 < th dose dependent rect. 6 1
404 22.55 radiation 30.0 4320 < th dose independent rect. 2 6
405 22.55 humidity 50.0 14400 > th dose independent rect. 1 8
412 22.56 radiation 10.0 14400 > th dose independent rect. 5 1
421 22.56 temperature 25.0 14400 < th dose independent rect. 10 6
435 22.56 wind 9.0 14400 > th dose dependent sin 6 NA
449 22.57 temperature 15.0 270 > th dose independent rect. 19 15
450 22.57 precipitation 0.1 90 < th dose independent rect. 3 16
452 22.57 humidity 50.0 90 > th dose independent rect. 19 19
460 22.57 precipitation 0.1 90 < th dose dependent rect. 3 16
462 22.58 temperature 25.0 14400 > th dose independent rect. 15 1
463 22.58 temperature 25.0 14400 < th dose independent rect. 15 1
472 22.58 precipitation 0.1 270 < th dose independent rect. 10 9
481 22.58 wind 7.0 90 < th dose independent rect. 19 19
483 22.58 precipitation 0.1 270 < th dose dependent rect. 10 9
515 22.60 radiation 40.0 4320 < th dose independent rect. 16 4
532 22.60 wind 9.0 90 < th dose dependent rect. 19 8
534 22.60 temperature 10.0 270 > th dose dependent rect. 6 18
551 22.61 temperature 15.0 90 > th dose independent rect. 19 19
625 22.64 atmosphere 1005.0 43200 > th dose independent rect. 11 1
638 22.64 wind 7.0 270 < th dose independent rect. 19 15
640 22.64 humidity 50.0 270 > th dose independent rect. 17 21
641 22.64 wind 1.0 43200 > th dose dependent rect. 4 2
645 22.64 temperature 15.0 10 > th dose dependent rect. 6 8
651 22.65 atmosphere 1005.0 43200 < th dose independent rect. 11 1
658 22.65 temperature 15.0 90 > th dose independent rect. 19 8
659 22.65 temperature 20.0 270 > th dose independent rect. 10 9
665 22.65 wind 7.0 270 < th dose independent rect. 6 17
717 22.67 radiation 1.0 270 > th dose independent sin 18 NA
745 22.67 wind 9.0 43200 < th dose dependent rect. 4 2
749 22.67 radiation 20.0 43200 < th dose dependent rect. 20 5
781 22.68 temperature 30.0 14400 < th dose dependent rect. 11 1
797 22.69 atmosphere 1005.0 43200 < th dose independent rect. 3 1
802 22.69 temperature 10.0 270 > th dose independent rect. 10 9
803 22.69 atmosphere 1015.0 270 < th dose independent rect. 10 9
813 22.69 atmosphere 995.0 270 > th dose independent rect. 19 15
814 22.69 temperature 15.0 90 > th dose independent rect. 3 16
815 22.69 wind 9.0 43200 > th dose independent rect. 21 19
819 22.69 radiation 20.0 43200 < th dose dependent rect. 20 7
839 22.70 temperature 30.0 90 < th dose independent rect. 19 8
840 22.70 humidity 50.0 90 > th dose independent rect. 19 8
842 22.70 atmosphere 995.0 90 > th dose independent rect. 19 8
843 22.70 radiation 1.0 90 < th dose independent rect. 19 8
856 22.70 atmosphere 1015.0 90 < th dose independent rect. 3 16
858 22.70 temperature 25.0 270 < th dose independent rect. 24 17
867 22.70 radiation 1.0 90 < th dose dependent rect. 19 8
875 22.70 temperature 30.0 270 < th dose dependent rect. 24 17
898 22.71 wind 3.0 43200 > th dose independent rect. 22 14
899 22.71 wind 1.0 270 > th dose independent rect. 13 15
915 22.72 humidity 80.0 14400 < th dose independent rect. 6 1
918 22.72 temperature 15.0 1440 > th dose independent rect. 20 5
954 22.73 atmosphere 1005.0 43200 > th dose independent rect. 3 1
955 22.73 atmosphere 1005.0 43200 < th dose independent rect. 1 1
980 22.73 temperature 25.0 14400 > th dose independent rect. 4 13