Os01g0556400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0556400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Heat shock protein DnaJ family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35 | 0.278 | 8.94 | 0.525 | 0.272 | -0.445 | 0.688 | -0.109 | 0.157 | 16.8 | 0.0221 | 60 | -- | -- |
| 35.03 | 0.276 | 8.94 | 0.536 | 0.269 | -0.434 | 0.75 | -- | 0.161 | 16.5 | 0.02202 | 63 | -- | -- |
| 36 | 0.279 | 8.94 | 0.524 | 0.272 | -0.427 | -- | -0.277 | 0.157 | 16.4 | 0.02008 | 65 | -- | -- |
| 36.5 | 0.281 | 8.94 | 0.532 | 0.277 | -0.424 | -- | -- | 0.155 | 16.3 | 0.01914 | 65 | -- | -- |
| 38.43 | 0.289 | 8.94 | 0.585 | -- | -0.478 | -- | -0.452 | 0.196 | -- | 0.06002 | 137 | -- | -- |
| 39.15 | 0.293 | 8.93 | 0.558 | 0.677 | -- | 0.532 | -- | 0.18 | 13.8 | -- | -- | -- | -- |
| 40.24 | 0.297 | 8.93 | 0.574 | 0.676 | -- | -- | -- | 0.183 | 13.7 | -- | -- | -- | -- |
| 38.71 | 0.29 | 8.93 | 0.544 | -- | -0.548 | -- | -- | 0.16 | -- | 0.005491 | 137 | -- | -- |
| 44.1 | 0.309 | 8.94 | -- | 0.298 | -0.425 | -- | -- | 0.145 | 16.4 | 0.009927 | 65 | -- | -- |
| 68.04 | 0.385 | 8.94 | 0.547 | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
| 48.92 | 0.327 | 8.94 | -- | 0.665 | -- | -- | -- | 0.119 | 13.7 | -- | -- | -- | -- |
| 46.04 | 0.316 | 8.93 | -- | -- | -0.57 | -- | -- | 0.145 | -- | 1.085e-06 | 157 | -- | -- |
| 75.92 | 0.407 | 8.95 | -- | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 33.84 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 4 | 34.22 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 6 | 34.28 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 10 |
| 7 | 34.28 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 9 | 34.36 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 19 | 10 |
| 10 | 34.36 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 19 | 10 |
| 11 | 34.42 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 20 | 11 |
| 12 | 34.45 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 20 |
| 14 | 34.52 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 14 |
| 15 | 34.52 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 14 |
| 16 | 34.54 | wind | 9.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 17 | 34.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 18 | 34.55 | temperature | 30.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 19 | 34.55 | humidity | 50.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 21 | 34.55 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 19 | 10 |
| 22 | 34.55 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 28 | 34.55 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 30 | 34.55 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 14 |
| 31 | 34.55 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 10 |
| 37 | 34.57 | humidity | 50.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 40 | 34.62 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 21 |
| 43 | 34.65 | temperature | 30.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 44 | 34.65 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 18 | 11 |
| 74 | 34.72 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 14 |
| 79 | 34.79 | wind | 5.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 81 | 34.79 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 21 |
| 82 | 34.79 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 21 |
| 89 | 34.84 | wind | 1.0 | 90 | > th | dose independent | rect. | 18 | 11 |
| 100 | 34.87 | radiation | 1.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 103 | 34.89 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 105 | 34.89 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 106 | 34.89 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 108 | 34.89 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 3 |
| 110 | 34.89 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 3 |
| 112 | 34.89 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 113 | 34.89 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 115 | 34.90 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 14 |
| 118 | 34.91 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 122 | 34.93 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 13 |
| 124 | 34.94 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 21 |
| 125 | 34.94 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 127 | 34.95 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 129 | 34.96 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 19 | 10 |
| 150 | 34.98 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 3 |
| 171 | 35.03 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 11 |
| 183 | 35.05 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 20 |
| 188 | 35.06 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 14 |
| 208 | 35.11 | wind | 3.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 212 | 35.12 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 8 | 21 |
| 222 | 35.16 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 22 | 10 |
| 226 | 35.18 | radiation | 1.0 | 90 | < th | dose independent | sin | 13 | NA |
| 240 | 35.20 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 270 | 35.25 | radiation | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 293 | 35.25 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 309 | 35.30 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 11 |
| 313 | 35.30 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 316 | 35.30 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 12 | 20 |
| 318 | 35.31 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 16 | 13 |
| 364 | 35.36 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 16 | 11 |
| 367 | 35.37 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 9 |
| 371 | 35.37 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 385 | 35.38 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 13 |
| 387 | 35.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 14 |
| 390 | 35.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 395 | 35.39 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 431 | 35.43 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 434 | 35.43 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 438 | 35.43 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 444 | 35.43 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 9 |
| 445 | 35.43 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 20 | 9 |
| 481 | 35.43 | radiation | 20.0 | 270 | < th | dose independent | rect. | 16 | 11 |
| 482 | 35.43 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 524 | 35.48 | wind | 9.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 546 | 35.51 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 547 | 35.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 548 | 35.51 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 550 | 35.51 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 551 | 35.51 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 553 | 35.51 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 555 | 35.51 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 14 |
| 569 | 35.52 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 18 |
| 612 | 35.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 617 | 35.56 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 629 | 35.57 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 13 |
| 630 | 35.57 | humidity | 50.0 | 10 | > th | dose independent | rect. | 5 | 14 |
| 643 | 35.58 | radiation | 10.0 | 30 | > th | dose independent | rect. | 8 | 4 |
| 649 | 35.59 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 10 |
| 652 | 35.59 | radiation | 1.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 654 | 35.59 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 661 | 35.60 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 664 | 35.60 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 3 |
| 697 | 35.64 | radiation | 1.0 | 30 | > th | dose independent | sin | 12 | NA |
| 737 | 35.68 | radiation | 10.0 | 30 | < th | dose independent | rect. | 5 | 5 |
| 754 | 35.69 | radiation | 1.0 | 270 | > th | dose independent | rect. | 9 | 22 |
| 759 | 35.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 762 | 35.70 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 764 | 35.70 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 765 | 35.70 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 771 | 35.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 774 | 35.70 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 788 | 35.72 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 797 | 35.72 | wind | 9.0 | 10 | < th | dose dependent | rect. | 19 | 10 |
| 801 | 35.73 | temperature | 20.0 | 10 | > th | dose independent | rect. | 17 | 15 |
| 804 | 35.73 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 5 | 5 |
| 810 | 35.73 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 13 |
| 832 | 35.75 | radiation | 1.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 880 | 35.78 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 918 | 35.80 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 18 |
| 921 | 35.81 | temperature | 20.0 | 30 | > th | dose independent | rect. | 8 | 4 |
| 925 | 35.81 | wind | 1.0 | 30 | > th | dose independent | rect. | 8 | 14 |
| 979 | 35.84 | temperature | 20.0 | 270 | > th | dose independent | rect. | 12 | 11 |
| 982 | 35.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 8 | 14 |