Os01g0555300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0555300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10.99 | 0.156 | 11.6 | 0.521 | 0.332 | -0.332 | -0.262 | 1.46 | 0.281 | 15.7 | 24.42 | 1440 | -- | -- |
| 11.6 | 0.159 | 11.7 | 0.134 | 0.33 | -0.224 | -0.28 | -- | 0.221 | 15.7 | 21.35 | 8627 | -- | -- |
| 11.17 | 0.156 | 11.6 | 0.538 | 0.324 | -0.337 | -- | 1.5 | 0.289 | 15.9 | 24.06 | 1406 | -- | -- |
| 11.49 | 0.158 | 11.7 | 0.182 | 0.343 | -0.314 | -- | -- | 0.22 | 16 | 9.244 | 7574 | -- | -- |
| 16.33 | 0.188 | 11.6 | 0.503 | -- | -0.411 | -- | 1.45 | 0.293 | -- | 23.37 | 1224 | -- | -- |
| 13.43 | 0.172 | 11.7 | 0.0309 | 0.343 | -- | -0.279 | -- | 0.14 | 15.6 | -- | -- | -- | -- |
| 13.66 | 0.173 | 11.7 | 0.0263 | 0.343 | -- | -- | -- | 0.138 | 15.7 | -- | -- | -- | -- |
| 17.23 | 0.193 | 11.7 | 0.237 | -- | -0.419 | -- | -- | 0.252 | -- | 9.841 | 8366 | -- | -- |
| 12.27 | 0.163 | 11.7 | -- | 0.333 | -0.246 | -- | -- | 0.19 | 15.8 | 11.81 | 7538 | -- | -- |
| 20.17 | 0.21 | 11.7 | 0.0121 | -- | -- | -- | -- | 0.129 | -- | -- | -- | -- | -- |
| 13.68 | 0.173 | 11.7 | -- | 0.343 | -- | -- | -- | 0.135 | 15.7 | -- | -- | -- | -- |
| 18.21 | 0.199 | 11.7 | -- | -- | -0.288 | -- | -- | 0.186 | -- | 10.3 | 6960 | -- | -- |
| 20.17 | 0.21 | 11.7 | -- | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.44 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 9 |
| 3 | 10.49 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 6 | 10.55 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 7 | 10.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 16 |
| 8 | 10.60 | wind | 9.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 11 | 10.62 | temperature | 30.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 13 | 10.62 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 14 | 10.62 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 12 |
| 15 | 10.62 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 17 |
| 23 | 10.65 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 50 | 10.71 | temperature | 30.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 58 | 10.73 | temperature | 10.0 | 720 | > th | dose dependent | sin | 10 | NA |
| 59 | 10.73 | temperature | 10.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 148 | 10.85 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 152 | 10.85 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 153 | 10.85 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 7 |
| 184 | 10.87 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 209 | 10.90 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 212 | 10.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 219 | 10.90 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 229 | 10.91 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 260 | 10.93 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 12 |
| 289 | 10.94 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 295 | 10.95 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 15 | NA |
| 327 | 10.96 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 8 | 16 |
| 363 | 10.97 | wind | 5.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 364 | 10.97 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 365 | 10.97 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 397 | 10.98 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 407 | 10.98 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 416 | 10.98 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 417 | 10.98 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 418 | 10.98 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 444 | 10.99 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 449 | 10.99 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 450 | 10.99 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 452 | 10.99 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 8 | 16 |
| 458 | 10.99 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 497 | 11.00 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 500 | 11.00 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 508 | 11.00 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 523 | 11.00 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 563 | 11.01 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 568 | 11.01 | wind | 7.0 | 43200 | > th | dose independent | rect. | 13 | 11 |
| 630 | 11.02 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 631 | 11.02 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 646 | 11.02 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 684 | 11.02 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 2 | 22 |
| 691 | 11.03 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 692 | 11.03 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 696 | 11.03 | wind | 7.0 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 700 | 11.03 | wind | 7.0 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 701 | 11.03 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 709 | 11.03 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 14 |
| 720 | 11.03 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 721 | 11.03 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 728 | 11.03 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 755 | 11.03 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 13 | 15 |
| 767 | 11.03 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 3 | 20 |
| 781 | 11.03 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 19 | 22 |
| 788 | 11.03 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 790 | 11.04 | wind | 7.0 | 43200 | > th | dose independent | sin | 18 | NA |
| 798 | 11.04 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 801 | 11.04 | wind | 7.0 | 43200 | > th | dose independent | rect. | 10 | 12 |
| 899 | 11.05 | wind | 7.0 | 43200 | < th | dose independent | sin | 18 | NA |
| 901 | 11.05 | temperature | 25.0 | 1440 | > th | dose independent | sin | 19 | NA |
| 902 | 11.05 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 903 | 11.05 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 915 | 11.05 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 933 | 11.05 | wind | 7.0 | 43200 | > th | dose dependent | sin | 17 | NA |