Os01g0555100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to TATA-binding protein associated factor 2N (RNA-binding protein 56) (TAFII68) (TAF(II)68).
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Os01g0555100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to TATA-binding protein associated factor 2N (RNA-binding protein 56) (TAFII68) (TAF(II)68).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 838.77 | 1.36 | 8.62 | -6.69 | 2.1 | -4.33 | 2.39 | 3 | -1.07 | 5.56 | 90.65 | 1441 | 14.5 | -- |
| 847.86 | 1.36 | 8.64 | -6.37 | 2.08 | -4.05 | 2.61 | -- | -1.04 | 5.6 | 89.82 | 1439 | 14.5 | -- |
| 849.93 | 1.36 | 8.63 | -6.72 | 2.12 | -4.34 | -- | 3.37 | -1.07 | 5.19 | 90.78 | 1447 | 14.4 | -- |
| 860.96 | 1.37 | 8.65 | -6.37 | 2.09 | -4.02 | -- | -- | -1.04 | 5.2 | 89.74 | 1447 | 14.7 | -- |
| 1083.44 | 1.53 | 8.63 | -6.62 | -- | -4.19 | -- | 3.29 | -0.949 | -- | 91.46 | 1333 | 15.2 | -- |
| 1094.77 | 1.55 | 8.51 | -6.75 | 2.05 | -- | 2.66 | -- | -0.477 | 5.49 | -- | -- | -- | -- |
| 1110.09 | 1.56 | 8.53 | -6.74 | 2.07 | -- | -- | -- | -0.49 | 5.14 | -- | -- | -- | -- |
| 1085.6 | 1.53 | 8.66 | -6.27 | -- | -3.44 | -- | -- | -0.994 | -- | 83 | 1605 | 14.5 | -- |
| 1827.62 | 1.99 | 8.49 | -- | 3.25 | -5.74 | -- | -- | -0.425 | 4.33 | 78.6 | 1912 | 9.73 | -- |
| 1333.6 | 1.71 | 8.55 | -6.67 | -- | -- | -- | -- | -0.438 | -- | -- | -- | -- | -- |
| 2308.54 | 2.25 | 8.36 | -- | 1.95 | -- | -- | -- | 0.261 | 5.26 | -- | -- | -- | -- |
| 2093.61 | 2.13 | 8.66 | -- | -- | -4.57 | -- | -- | -0.885 | -- | 78.15 | 2832 | 9.98 | -- |
| 2507.12 | 2.34 | 8.38 | -- | -- | -- | -- | -- | 0.302 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 834.18 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 8 | 16 |
| 3 | 840.16 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 5 | 840.81 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 8 | 841.63 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 10 | 841.82 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 24 | 850.12 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 16 |
| 27 | 850.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 31 | 851.12 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 41 | 852.06 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 21 |
| 50 | 853.32 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 9 | 12 |
| 86 | 856.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 93 | 857.03 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 16 |
| 115 | 859.00 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 22 |
| 122 | 859.68 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 126 | 859.98 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 131 | 860.45 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 10 | 20 |
| 132 | 860.48 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 7 | 12 |
| 151 | 861.15 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 10 |
| 153 | 861.21 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 22 |
| 159 | 861.75 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 179 | 862.52 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 252 | 865.78 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 15 | 14 |
| 261 | 865.89 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 5 |
| 278 | 866.60 | radiation | 1.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 280 | 866.64 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 14 | 5 |
| 302 | 866.87 | radiation | 1.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 305 | 867.00 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 316 | 867.75 | humidity | 90.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 359 | 869.68 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 9 |
| 369 | 870.00 | humidity | 80.0 | 1440 | > th | dose independent | sin | 19 | NA |
| 370 | 870.04 | radiation | 1.0 | 4320 | > th | dose independent | sin | 16 | NA |
| 381 | 870.25 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 389 | 870.65 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 455 | 872.00 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 483 | 873.20 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 18 |
| 493 | 873.30 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 519 | 873.58 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 23 |
| 524 | 873.65 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 9 | 20 |
| 552 | 873.99 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 554 | 874.01 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 9 | 10 |
| 599 | 874.25 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 613 | 874.36 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 620 | 874.55 | humidity | 80.0 | 1440 | < th | dose independent | sin | 19 | NA |
| 655 | 875.22 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 8 |
| 677 | 875.36 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 685 | 875.49 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 744 | 876.25 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 15 |
| 752 | 876.41 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 805 | 877.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 810 | 877.26 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 812 | 877.26 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 20 | 21 |
| 858 | 878.00 | radiation | 1.0 | 4320 | < th | dose independent | sin | 18 | NA |
| 883 | 878.53 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 17 |
| 917 | 878.67 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 4 | 13 |
| 940 | 878.77 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 943 | 878.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 958 | 879.01 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 12 | 23 |
| 973 | 879.17 | radiation | 1.0 | 1440 | > th | dose independent | no | NA | NA |