Os01g0551900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0551900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : WD40-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.26 | 0.236 | 9.31 | 1.87 | 0.338 | -0.728 | -0.751 | 4.63 | 0.437 | 3.3 | 25.9 | 1106 | -- | -- |
| 29.48 | 0.253 | 9.41 | 1.1 | 0.333 | -0.431 | -0.593 | -- | 0.334 | 4.34 | 14.69 | 10441 | -- | -- |
| 26.96 | 0.242 | 9.31 | 1.84 | 0.34 | -0.709 | -- | 4.35 | 0.42 | 3.61 | 26.11 | 1131 | -- | -- |
| 30.46 | 0.257 | 9.39 | 1.14 | 0.328 | -0.446 | -- | -- | 0.38 | 4.34 | 11.72 | 16886 | -- | -- |
| 30.91 | 0.259 | 9.3 | 1.91 | -- | -0.669 | -- | 4.25 | 0.491 | -- | 25.09 | 1868 | -- | -- |
| 32.38 | 0.267 | 9.44 | 0.793 | 0.323 | -- | -0.654 | -- | 0.193 | 4.31 | -- | -- | -- | -- |
| 33.54 | 0.271 | 9.43 | 0.8 | 0.321 | -- | -- | -- | 0.197 | 4.5 | -- | -- | -- | -- |
| 36.12 | 0.28 | 9.39 | 1.15 | -- | -0.444 | -- | -- | 0.39 | -- | 10.9 | 16314 | -- | -- |
| 41.46 | 0.3 | 9.49 | -- | 0.319 | 0.481 | -- | -- | -0.0358 | 4.58 | 2.785 | 47520 | -- | -- |
| 39.04 | 0.292 | 9.44 | 0.812 | -- | -- | -- | -- | 0.205 | -- | -- | -- | -- | -- |
| 50.4 | 0.332 | 9.45 | -- | 0.336 | -- | -- | -- | 0.108 | 4.45 | -- | -- | -- | -- |
| 40.96 | 0.298 | 9.5 | -- | -- | 0.541 | -- | -- | 0.0294 | -- | 34.81 | 47424 | -- | -- |
| 56.44 | 0.351 | 9.46 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.83 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 2 | 25.00 | wind | 3.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 3 | 25.02 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 5 | 25.08 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 8 | 25.24 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 15 | 25.30 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 18 | 25.34 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 8 | 5 |
| 19 | 25.40 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 20 | 25.41 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 14 |
| 21 | 25.41 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 20 | 17 |
| 24 | 25.43 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 32 | 25.46 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 8 |
| 35 | 25.47 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 40 | 25.48 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 48 | 25.54 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 82 | 25.62 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 87 | 25.64 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 93 | 25.65 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 107 | 25.70 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 113 | 25.72 | wind | 3.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 120 | 25.73 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 123 | 25.74 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 125 | 25.75 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 128 | 25.75 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 14 |
| 132 | 25.76 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 140 | 25.78 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 8 |
| 153 | 25.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 14 |
| 154 | 25.80 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 155 | 25.81 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 156 | 25.81 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 17 | 7 |
| 165 | 25.82 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 176 | 25.83 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 177 | 25.83 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 180 | 25.83 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 184 | 25.84 | wind | 3.0 | 43200 | < th | dose independent | sin | 2 | NA |
| 205 | 25.86 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 5 |
| 208 | 25.86 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 214 | 25.86 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 11 |
| 219 | 25.87 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 239 | 25.89 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 257 | 25.91 | wind | 3.0 | 43200 | > th | dose independent | sin | 2 | NA |
| 278 | 25.93 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 279 | 25.93 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 3 |
| 283 | 25.93 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 308 | 25.96 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 310 | 25.96 | temperature | 25.0 | 720 | > th | dose dependent | sin | 16 | NA |
| 317 | 25.96 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 3 | 14 |
| 351 | 25.99 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 13 |
| 405 | 26.04 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 9 |
| 421 | 26.06 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 434 | 26.06 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 7 |
| 452 | 26.07 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 470 | 26.08 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 505 | 26.12 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 556 | 26.15 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 614 | 26.19 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 622 | 26.20 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 633 | 26.20 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 655 | 26.21 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 661 | 26.21 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 679 | 26.22 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 688 | 26.22 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 714 | 26.23 | wind | 3.0 | 43200 | < th | dose independent | rect. | 16 | 22 |
| 749 | 26.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 792 | 26.25 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 901 | 26.29 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 923 | 26.29 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 11 | 13 |
| 942 | 26.30 | atmosphere | 1010.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 980 | 26.31 | temperature | 20.0 | 30 | > th | dose dependent | sin | 13 | NA |