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Os01g0551000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0261) R2 : 0.62
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.81 (0.0669) R2dC : 0.611 R2C : 0.599
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.247 (0.0549) R2dN8 : 0.0217 R2N8 : 0.00975
σ : 0.492
deviance : 110.74
__
_____
C
peak time of C : 7.85
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
90.82 0.448 12.2 0.468 1.57 -0.721 0.955 1 -0.207 6.22 17.19 11 -- --
95.9 0.456 12.2 0.442 1.55 -0.788 0.871 -- -0.208 5.9 15.96 11 -- --
93.02 0.449 12.2 0.475 1.57 -0.711 -- 0.903 -0.211 6.23 16.94 11 -- --
97.42 0.46 12.2 0.448 1.58 -0.674 -- -- -0.212 6.31 16.02 10 -- --
213.64 0.684 12.2 0.51 -- -0.791 -- 0.717 -0.188 -- 7.1 8 -- --
105.04 0.48 12.2 0.465 1.8 -- -0.0232 -- -0.195 7.87 -- -- -- --
105.04 0.48 12.2 0.465 1.8 -- -- -- -0.195 7.86 -- -- -- --
216.56 0.688 12.2 0.497 -- -0.792 -- -- -0.193 -- 6.3 6 -- --
102.73 0.472 12.2 -- 1.58 -0.675 -- -- -0.26 6.31 16.6 10 -- --
281.44 0.784 12.2 0.485 -- -- -- -- -0.171 -- -- -- -- --
110.74 0.492 12.2 -- 1.81 -- -- -- -0.247 7.85 -- -- -- --
223.08 0.698 12.2 -- -- -0.79 -- -- -0.249 -- 6.29 6 -- --
287.65 0.792 12.2 -- -- -- -- -- -0.224 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 79.10 wind 9.0 270 < th dose independent rect. 13 14
2 79.82 precipitation 0.1 270 < th dose independent rect. 3 10
3 79.82 precipitation 0.1 270 < th dose dependent rect. 3 10
4 80.90 precipitation 0.1 270 < th dose independent rect. 13 14
5 80.90 precipitation 0.1 270 < th dose dependent rect. 13 14
6 81.15 temperature 10.0 270 > th dose independent rect. 3 10
7 81.15 atmosphere 995.0 270 > th dose independent rect. 3 10
8 81.15 atmosphere 1015.0 270 < th dose independent rect. 3 10
9 81.15 temperature 10.0 270 > th dose independent rect. 13 14
12 81.58 wind 9.0 270 < th dose independent rect. 3 10
15 82.57 humidity 50.0 270 > th dose independent rect. 3 10
25 83.58 radiation 40.0 90 < th dose independent rect. 13 15
26 83.68 radiation 20.0 10 < th dose dependent rect. 24 19
28 83.90 atmosphere 1015.0 270 < th dose independent rect. 13 14
35 84.26 wind 9.0 270 < th dose independent rect. 21 22
39 84.39 radiation 1.0 30 > th dose independent rect. 5 9
57 84.57 radiation 20.0 10 < th dose dependent rect. 22 21
74 84.85 humidity 60.0 14400 > th dose independent rect. 20 5
95 85.00 atmosphere 995.0 270 > th dose independent rect. 13 14
132 85.36 temperature 15.0 270 > th dose independent rect. 19 2
136 85.45 radiation 1.0 30 < th dose independent rect. 24 19
154 85.71 temperature 15.0 90 > th dose independent rect. 19 18
163 85.82 wind 9.0 270 < th dose independent rect. 22 19
165 85.84 temperature 15.0 90 > th dose independent rect. 19 5
169 85.91 temperature 15.0 270 > th dose independent rect. 17 5
173 86.02 radiation 1.0 30 > th dose independent sin 3 NA
180 86.12 humidity 90.0 30 < th dose independent rect. 19 20
190 86.23 temperature 30.0 90 < th dose independent rect. 19 18
192 86.24 wind 9.0 90 < th dose independent rect. 13 6
193 86.26 atmosphere 995.0 270 > th dose independent rect. 17 5
200 86.34 humidity 60.0 270 > th dose dependent rect. 22 6
209 86.39 radiation 1.0 720 > th dose independent rect. 9 6
229 86.47 radiation 40.0 90 < th dose independent rect. 13 6
232 86.50 atmosphere 1015.0 270 < th dose independent rect. 22 19
234 86.52 wind 1.0 270 > th dose independent rect. 3 10
244 86.57 precipitation 0.1 90 < th dose independent rect. 13 6
247 86.57 precipitation 0.1 90 < th dose dependent rect. 13 6
248 86.58 wind 1.0 90 > th dose independent rect. 13 6
250 86.58 radiation 20.0 270 < th dose dependent rect. 17 5
255 86.61 temperature 30.0 270 < th dose independent rect. 19 2
256 86.61 humidity 50.0 270 > th dose independent rect. 19 2
257 86.61 atmosphere 995.0 270 > th dose independent rect. 19 2
258 86.61 radiation 1.0 270 < th dose independent rect. 19 2
264 86.61 temperature 10.0 270 > th dose independent rect. 21 22
265 86.61 radiation 1.0 270 < th dose dependent rect. 19 2
278 86.67 wind 9.0 270 < th dose independent rect. 19 2
298 86.81 radiation 20.0 270 < th dose independent rect. 17 5
301 86.81 temperature 10.0 270 > th dose independent rect. 22 19
308 86.85 temperature 20.0 90 > th dose independent rect. 13 6
311 86.92 temperature 10.0 90 > th dose independent rect. 13 6
313 86.92 atmosphere 995.0 90 > th dose independent rect. 13 6
314 86.92 atmosphere 1010.0 90 < th dose independent rect. 13 6
318 86.92 atmosphere 995.0 90 > th dose independent rect. 19 18
330 86.99 humidity 50.0 270 > th dose independent rect. 17 5
350 87.10 wind 9.0 90 < th dose independent rect. 19 18
351 87.10 radiation 1.0 270 < th dose dependent rect. 22 18
355 87.12 atmosphere 1015.0 10 < th dose independent rect. 14 15
362 87.16 precipitation 0.1 90 < th dose independent rect. 19 18
363 87.16 precipitation 0.1 90 < th dose dependent rect. 19 18
370 87.23 wind 9.0 270 < th dose independent rect. 17 5
371 87.24 radiation 1.0 270 < th dose independent rect. 22 17
373 87.25 temperature 30.0 270 < th dose independent rect. 3 9
379 87.28 humidity 50.0 270 > th dose independent rect. 13 14
392 87.35 wind 1.0 270 > th dose independent rect. 19 2
402 87.39 temperature 10.0 90 > th dose dependent rect. 4 9
403 87.40 precipitation 0.1 270 < th dose independent rect. 19 2
405 87.40 precipitation 0.1 270 < th dose dependent rect. 19 2
421 87.43 radiation 40.0 10 < th dose dependent rect. 13 16
430 87.45 atmosphere 995.0 270 > th dose independent rect. 22 19
435 87.48 humidity 60.0 14400 > th dose independent rect. 20 12
449 87.55 humidity 70.0 270 > th dose dependent rect. 23 4
454 87.57 atmosphere 1015.0 270 < th dose independent rect. 22 6
462 87.58 temperature 30.0 90 < th dose independent rect. 19 5
463 87.58 humidity 50.0 90 > th dose independent rect. 19 5
466 87.58 radiation 1.0 90 < th dose independent rect. 19 5
473 87.58 radiation 1.0 90 < th dose dependent rect. 19 5
480 87.59 humidity 50.0 90 > th dose independent rect. 19 18
487 87.64 temperature 10.0 90 > th dose dependent rect. 14 14
511 87.70 wind 9.0 90 < th dose independent rect. 19 5
519 87.72 precipitation 0.1 270 < th dose independent rect. 21 22
520 87.72 precipitation 0.1 270 < th dose dependent rect. 21 22
521 87.73 atmosphere 1015.0 270 < th dose independent rect. 19 2
528 87.76 temperature 15.0 270 > th dose independent rect. 17 18
529 87.76 atmosphere 995.0 90 > th dose independent rect. 24 19
530 87.76 temperature 15.0 270 > th dose independent rect. 17 20
537 87.79 radiation 1.0 30 < th dose independent sin 3 NA
541 87.81 wind 9.0 10 < th dose independent rect. 14 15
548 87.83 radiation 1.0 30 < th dose independent rect. 24 16
558 87.87 humidity 80.0 270 > th dose independent rect. 22 6
561 87.88 radiation 1.0 30 < th dose dependent sin 3 NA
569 87.93 temperature 10.0 10 > th dose dependent rect. 5 9
572 87.94 precipitation 0.1 270 < th dose independent rect. 22 19
573 87.94 precipitation 0.1 270 < th dose dependent rect. 22 19
577 87.96 precipitation 0.1 270 < th dose independent rect. 17 5
579 87.96 precipitation 0.1 270 < th dose dependent rect. 17 5
589 88.03 humidity 50.0 10 > th dose dependent rect. 24 19
635 88.10 wind 9.0 270 < th dose independent rect. 11 6
643 88.11 radiation 40.0 90 < th dose independent rect. 19 18
663 88.13 radiation 20.0 10 < th dose dependent rect. 7 23
664 88.14 precipitation 0.1 90 < th dose independent rect. 24 19
667 88.14 precipitation 0.1 90 < th dose dependent rect. 24 19
673 88.17 humidity 90.0 270 < th dose independent rect. 19 2
677 88.18 atmosphere 995.0 90 > th dose dependent rect. 13 6
678 88.18 radiation 20.0 30 < th dose dependent rect. 24 14
685 88.21 atmosphere 1015.0 270 < th dose independent rect. 22 10
695 88.23 radiation 20.0 30 < th dose dependent rect. 24 11
710 88.25 wind 9.0 720 < th dose independent rect. 7 10
720 88.25 radiation 40.0 270 < th dose dependent rect. 22 10
749 88.34 precipitation 0.1 10 < th dose independent rect. 5 9
751 88.34 precipitation 0.1 10 < th dose dependent rect. 5 9
756 88.36 temperature 30.0 270 < th dose independent rect. 17 5
758 88.36 temperature 15.0 270 > th dose independent rect. 8 14
770 88.39 wind 9.0 270 < th dose independent rect. 13 4
775 88.40 wind 1.0 270 > th dose independent rect. 17 5
778 88.41 atmosphere 995.0 270 > th dose independent rect. 17 18
784 88.42 wind 9.0 720 < th dose independent rect. 5 14
785 88.42 atmosphere 995.0 10 > th dose independent rect. 14 15
789 88.43 radiation 20.0 30 < th dose dependent sin 5 NA
790 88.44 precipitation 0.1 90 < th dose independent rect. 19 5
795 88.44 precipitation 0.1 90 < th dose dependent rect. 19 5
822 88.49 temperature 10.0 10 > th dose independent rect. 5 9
824 88.49 atmosphere 995.0 10 > th dose independent rect. 5 9
825 88.49 atmosphere 1015.0 10 < th dose independent rect. 5 9
826 88.49 temperature 10.0 10 > th dose independent rect. 14 15
832 88.51 radiation 40.0 90 < th dose independent rect. 19 16
845 88.54 radiation 1.0 270 < th dose dependent rect. 22 8
854 88.57 wind 9.0 10 < th dose independent rect. 5 9
867 88.61 humidity 60.0 14400 > th dose independent rect. 20 3
900 88.65 temperature 15.0 270 > th dose independent rect. 4 18
916 88.68 temperature 20.0 270 > th dose independent rect. 13 4
919 88.68 humidity 70.0 10 > th dose dependent rect. 24 10
922 88.69 atmosphere 1015.0 270 < th dose dependent rect. 23 5
927 88.70 radiation 1.0 270 < th dose independent rect. 22 9
958 88.73 humidity 70.0 10 > th dose dependent sin 7 NA
986 88.76 atmosphere 995.0 270 > th dose independent rect. 17 20