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Os01g0521400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0153) R2 : 0.861
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.11 (0.0402) R2dC : 0.844 R2C : 0.842
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.226 (0.0323) R2dN8 : 0.0192 R2N8 : 0.0173
σ : 0.289
deviance : 38.21
__
_____
C
peak time of C : 5.76
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.83 0.273 10.3 -0.273 2.11 0.33 0.28 2.25 0.176 5.79 7.2 88 -- --
35.86 0.281 10.2 -0.287 2.11 -0.311 0.142 -- 0.189 5.77 8.9 464 -- --
33.98 0.272 10.3 -0.266 2.11 0.423 -- 2.45 0.179 5.78 7.44 87 -- --
35.91 0.281 10.2 -0.286 2.11 -0.304 -- -- 0.189 5.76 8.9 464 -- --
187.28 0.641 10.3 -0.513 -- -0.928 -- 0.627 0.229 -- 3 333 -- --
36.4 0.283 10.2 -0.261 2.12 -- 0.106 -- 0.197 5.76 -- -- -- --
36.43 0.283 10.2 -0.26 2.12 -- -- -- 0.197 5.75 -- -- -- --
147.32 0.565 10.3 -0.685 -- -1.39 -- -- 0.256 -- 2.9 202 -- --
37.99 0.289 10.2 -- 2.11 -0.196 -- -- 0.222 5.76 8.9 464 -- --
268.85 0.766 10.3 -0.194 -- -- -- -- 0.247 -- -- -- -- --
38.21 0.289 10.2 -- 2.11 -- -- -- 0.226 5.76 -- -- -- --
158.96 0.587 10.2 -- -- -1.29 -- -- 0.333 -- 2.774 202 -- --
269.84 0.767 10.3 -- -- -- -- -- 0.268 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.46 temperature 30.0 90 < th dose dependent rect. 6 12
2 28.51 temperature 30.0 270 < th dose dependent rect. 5 5
5 28.64 temperature 30.0 10 < th dose dependent rect. 6 12
21 28.99 temperature 25.0 90 < th dose independent rect. 7 11
40 29.24 temperature 25.0 10 < th dose independent rect. 6 12
42 29.26 temperature 30.0 10 < th dose dependent rect. 6 6
58 29.35 temperature 10.0 270 > th dose dependent rect. 1 13
67 29.47 temperature 10.0 720 > th dose dependent rect. 3 2
82 29.55 temperature 10.0 90 > th dose dependent rect. 3 13
99 29.74 temperature 10.0 10 > th dose dependent rect. 3 13
100 29.76 temperature 25.0 270 < th dose dependent rect. 7 1
103 29.79 temperature 25.0 10 < th dose independent rect. 6 6
152 30.02 temperature 25.0 270 < th dose independent rect. 5 5
189 30.13 temperature 25.0 10 < th dose independent sin 1 NA
215 30.23 temperature 30.0 90 < th dose dependent sin 1 NA
218 30.23 radiation 40.0 90 < th dose dependent rect. 15 12
227 30.26 temperature 15.0 270 > th dose independent rect. 1 13
245 30.34 temperature 30.0 270 < th dose dependent sin 3 NA
251 30.35 radiation 20.0 10 < th dose dependent rect. 14 13
256 30.38 temperature 15.0 720 > th dose independent rect. 1 4
308 30.53 radiation 20.0 90 < th dose independent rect. 15 12
329 30.60 radiation 10.0 10 < th dose independent rect. 12 15
336 30.61 radiation 20.0 10 < th dose dependent rect. 7 20
368 30.71 temperature 15.0 90 > th dose independent rect. 3 12
386 30.76 precipitation 0.1 270 < th dose independent rect. 1 13
388 30.76 precipitation 0.1 270 < th dose dependent rect. 1 13
390 30.76 radiation 20.0 10 < th dose dependent rect. 9 18
428 30.83 temperature 30.0 720 < th dose dependent rect. 22 11
436 30.85 wind 9.0 270 < th dose independent rect. 1 13
445 30.87 temperature 20.0 720 > th dose independent rect. 15 2
459 30.89 wind 9.0 270 < th dose independent rect. 14 11
472 30.93 temperature 10.0 270 > th dose independent rect. 14 11
474 30.93 atmosphere 995.0 270 > th dose independent rect. 1 13
475 30.93 atmosphere 1015.0 270 < th dose independent rect. 1 13
483 30.95 atmosphere 1015.0 720 < th dose independent rect. 2 9
503 31.01 atmosphere 995.0 720 > th dose independent rect. 22 19
508 31.02 temperature 25.0 270 < th dose independent rect. 7 1
525 31.05 humidity 50.0 10 > th dose independent rect. 16 11
540 31.08 atmosphere 995.0 720 > th dose independent rect. 5 12
549 31.10 temperature 15.0 720 > th dose independent rect. 23 6
560 31.12 atmosphere 1015.0 720 < th dose independent rect. 1 4
567 31.13 wind 9.0 720 < th dose independent rect. 17 5
569 31.13 radiation 10.0 10 < th dose independent rect. 10 17
572 31.14 temperature 10.0 720 > th dose independent rect. 5 5
573 31.14 atmosphere 995.0 720 > th dose independent rect. 5 5
574 31.14 atmosphere 1015.0 720 < th dose independent rect. 5 5
579 31.14 temperature 10.0 720 > th dose independent rect. 10 19
584 31.15 humidity 50.0 720 > th dose independent rect. 5 5
589 31.16 wind 9.0 720 < th dose independent rect. 5 5
597 31.17 temperature 10.0 720 > th dose independent rect. 17 5
598 31.17 radiation 30.0 720 < th dose independent rect. 17 5
601 31.17 precipitation 0.1 90 < th dose independent rect. 3 12
603 31.17 temperature 10.0 720 > th dose independent rect. 22 19
607 31.17 precipitation 0.1 90 < th dose dependent rect. 3 12
609 31.18 temperature 10.0 270 > th dose independent rect. 18 11
610 31.18 humidity 50.0 270 > th dose independent rect. 18 11
611 31.18 radiation 20.0 270 < th dose independent rect. 18 11
614 31.18 temperature 10.0 270 > th dose independent rect. 5 13
615 31.18 atmosphere 1015.0 270 < th dose independent rect. 5 13
623 31.20 wind 9.0 270 < th dose independent rect. 18 11
625 31.20 wind 9.0 90 < th dose independent rect. 3 12
627 31.20 radiation 40.0 270 < th dose dependent rect. 18 11
636 31.22 temperature 15.0 720 > th dose independent rect. 17 22
647 31.24 temperature 15.0 720 > th dose independent rect. 2 11
673 31.27 precipitation 0.1 720 < th dose independent rect. 5 5
674 31.27 atmosphere 995.0 270 > th dose independent rect. 18 11
677 31.27 precipitation 0.1 720 < th dose dependent rect. 5 5
690 31.28 wind 9.0 10 < th dose independent rect. 3 13
699 31.29 atmosphere 1015.0 90 < th dose independent rect. 3 12
723 31.32 temperature 10.0 10 > th dose independent rect. 16 11
724 31.32 radiation 40.0 10 < th dose independent rect. 16 11
725 31.32 temperature 10.0 10 > th dose independent rect. 3 13
727 31.32 atmosphere 1015.0 10 < th dose independent rect. 3 13
766 31.36 precipitation 0.1 270 < th dose independent rect. 14 11
772 31.36 precipitation 0.1 270 < th dose dependent rect. 14 11
782 31.38 precipitation 0.1 10 < th dose independent rect. 16 11
789 31.38 precipitation 0.1 10 < th dose dependent rect. 16 11
792 31.39 wind 9.0 10 < th dose independent rect. 16 11
793 31.39 precipitation 0.1 270 < th dose independent rect. 18 11
799 31.39 precipitation 0.1 270 < th dose dependent rect. 18 11
828 31.41 wind 9.0 270 < th dose independent rect. 5 13
854 31.43 atmosphere 995.0 90 > th dose independent rect. 3 12
862 31.44 radiation 10.0 10 < th dose independent rect. 8 19
870 31.45 atmosphere 995.0 10 > th dose independent rect. 16 11
880 31.46 atmosphere 995.0 90 > th dose independent rect. 16 11
896 31.47 radiation 10.0 30 < th dose independent rect. 6 21
910 31.48 wind 1.0 720 > th dose independent rect. 17 5
924 31.49 atmosphere 995.0 10 > th dose independent rect. 3 13
930 31.50 temperature 30.0 270 < th dose independent rect. 18 11
949 31.51 radiation 40.0 720 < th dose dependent rect. 17 5
990 31.56 wind 9.0 720 < th dose independent rect. 22 19