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Os01g0513700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sybindin-like protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.00798) R2 : 0.763
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.744 (0.0194) R2dC : 0.766 R2C : 0.762
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0197 (0.0168) R2dN8 : 0.000928 R2N8 : -0.00351
σ : 0.15
deviance : 10.32
__
_____
C
peak time of C : 21.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
8.35 0.136 12.2 0.22 0.752 0.625 0.206 0.314 0.0278 21.8 20.07 334 -- --
8.37 0.135 12.2 0.218 0.75 0.481 0.189 -- 0.0297 21.8 20.34 359 -- --
8.51 0.136 12.2 0.213 0.752 0.602 -- 0.232 0.0255 21.8 19.94 352 -- --
8.51 0.136 12.2 0.213 0.753 0.49 -- -- 0.0281 21.8 20.17 366 -- --
37.03 0.285 12.2 0.254 -- 0.632 -- 0.0977 0.0849 -- 23.76 25 -- --
9.79 0.147 12.2 0.131 0.745 -- 0.177 -- -0.00551 21.9 -- -- -- --
9.91 0.147 12.2 0.124 0.744 -- -- -- -0.00584 21.9 -- -- -- --
36.99 0.284 12.2 0.267 -- 0.612 -- -- 0.0921 -- 24.1 8 -- --
9.58 0.144 12.2 -- 0.759 0.375 -- -- 0.00911 21.8 20.35 379 -- --
43.01 0.306 12.2 0.132 -- -- -- -- -0.00608 -- -- -- -- --
10.32 0.15 12.2 -- 0.744 -- -- -- -0.0197 21.9 -- -- -- --
38.73 0.291 12.2 -- -- 0.522 -- -- 0.0503 -- 24.1 8 -- --
43.48 0.308 12.2 -- -- -- -- -- -0.0208 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 8.24 temperature 25.0 10 < th dose dependent sin 4 NA
5 8.30 temperature 20.0 270 < th dose dependent rect. 23 22
6 8.31 temperature 20.0 270 < th dose dependent rect. 1 21
9 8.32 temperature 25.0 90 < th dose dependent rect. 23 14
14 8.33 temperature 25.0 10 < th dose dependent rect. 23 14
39 8.36 temperature 20.0 270 < th dose dependent rect. 5 23
51 8.38 temperature 20.0 270 < th dose dependent no NA NA
54 8.38 temperature 20.0 270 < th dose dependent rect. 16 20
68 8.39 humidity 90.0 720 > th dose dependent rect. 7 14
69 8.39 temperature 20.0 270 < th dose dependent rect. 21 15
81 8.39 temperature 25.0 10 < th dose dependent rect. 22 20
90 8.40 temperature 15.0 4320 > th dose independent rect. 16 4
105 8.41 temperature 15.0 4320 > th dose independent rect. 14 6
106 8.41 radiation 20.0 4320 < th dose independent rect. 21 9
128 8.42 radiation 20.0 4320 < th dose independent rect. 5 1
134 8.42 radiation 1.0 4320 < th dose dependent rect. 15 1
137 8.42 humidity 90.0 720 > th dose dependent rect. 6 17
158 8.44 precipitation 0.1 1440 > th dose independent rect. 2 1
160 8.44 temperature 15.0 4320 > th dose independent rect. 6 4
166 8.44 temperature 20.0 270 < th dose dependent sin 7 NA
169 8.44 precipitation 0.1 1440 > th dose dependent rect. 2 1
178 8.45 radiation 1.0 4320 > th dose independent rect. 15 1
179 8.45 radiation 1.0 4320 < th dose independent rect. 15 1
187 8.46 atmosphere 1015.0 4320 < th dose independent rect. 15 2
190 8.46 humidity 50.0 43200 > th dose independent rect. 24 5
197 8.46 temperature 25.0 10 < th dose dependent rect. 17 21
203 8.46 temperature 20.0 270 < th dose dependent rect. 10 23
207 8.47 humidity 50.0 43200 > th dose independent rect. 6 2
209 8.47 humidity 50.0 43200 > th dose independent rect. 24 8
212 8.47 temperature 15.0 720 > th dose independent rect. 17 19
213 8.47 temperature 20.0 270 < th dose dependent sin 22 NA
237 8.48 temperature 15.0 4320 > th dose independent rect. 6 14
238 8.48 temperature 20.0 270 > th dose independent rect. 7 14
256 8.48 temperature 25.0 10 < th dose dependent rect. 20 22
259 8.48 temperature 25.0 10 < th dose dependent rect. 1 23
260 8.48 temperature 25.0 10 < th dose dependent rect. 5 23
265 8.49 temperature 15.0 4320 < th dose independent rect. 18 1
278 8.49 temperature 15.0 1440 > th dose independent rect. 24 5
283 8.49 humidity 50.0 43200 > th dose independent rect. 2 6
289 8.49 temperature 25.0 10 < th dose dependent no NA NA
305 8.50 radiation 1.0 1440 < th dose independent rect. 10 1
313 8.50 humidity 50.0 43200 < th dose independent rect. 3 5
333 8.50 humidity 50.0 43200 < th dose dependent rect. 8 1
334 8.50 radiation 1.0 1440 < th dose dependent rect. 10 1
360 8.50 temperature 25.0 10 < th dose dependent rect. 7 23
361 8.50 temperature 25.0 10 < th dose dependent rect. 9 23
364 8.51 temperature 15.0 4320 > th dose independent sin 19 NA
369 8.51 humidity 50.0 43200 < th dose independent rect. 5 3
378 8.51 temperature 10.0 43200 > th dose independent rect. 14 7
385 8.51 temperature 15.0 1440 > th dose independent rect. 24 9
392 8.51 temperature 15.0 4320 > th dose independent rect. 6 11
402 8.51 temperature 15.0 4320 > th dose independent rect. 2 17
412 8.51 temperature 15.0 4320 > th dose independent rect. 6 19
413 8.51 temperature 15.0 4320 > th dose independent rect. 14 19
416 8.51 temperature 15.0 4320 < th dose independent rect. 2 20
418 8.51 temperature 15.0 720 > th dose independent rect. 24 21
440 8.51 temperature 25.0 10 < th dose dependent rect. 11 23
449 8.52 temperature 15.0 4320 < th dose independent sin 17 NA
453 8.52 temperature 15.0 4320 < th dose independent no NA NA
454 8.52 temperature 15.0 4320 > th dose independent rect. 3 2
462 8.52 humidity 70.0 43200 < th dose independent rect. 1 3
468 8.52 temperature 15.0 4320 > th dose independent rect. 2 7
486 8.52 temperature 15.0 4320 < th dose independent rect. 10 12
493 8.52 humidity 50.0 43200 < th dose independent rect. 19 13
497 8.52 temperature 15.0 4320 > th dose independent rect. 2 15
498 8.52 temperature 15.0 720 > th dose independent rect. 24 15
503 8.52 humidity 90.0 720 > th dose independent rect. 6 15
513 8.52 temperature 15.0 4320 < th dose independent rect. 14 16
517 8.52 temperature 15.0 4320 > th dose independent rect. 14 17
521 8.52 temperature 15.0 4320 < th dose independent rect. 4 17
535 8.52 temperature 15.0 4320 < th dose independent rect. 2 18
553 8.52 temperature 15.0 4320 < th dose independent rect. 11 19
619 8.52 temperature 15.0 4320 > th dose independent rect. 6 23
644 8.52 humidity 70.0 43200 < th dose dependent rect. 24 5
645 8.52 temperature 20.0 4320 < th dose dependent rect. 13 6
647 8.52 humidity 60.0 43200 < th dose dependent rect. 22 7
649 8.52 humidity 50.0 43200 < th dose dependent rect. 19 14
660 8.52 temperature 25.0 10 < th dose dependent rect. 3 23
665 8.53 temperature 15.0 4320 > th dose independent sin 16 NA
672 8.53 temperature 15.0 4320 > th dose independent no NA NA
673 8.53 temperature 15.0 4320 < th dose independent sin 13 NA
678 8.53 temperature 15.0 4320 < th dose independent sin 4 NA
685 8.53 radiation 1.0 1440 > th dose independent rect. 10 1
693 8.53 temperature 15.0 4320 > th dose independent rect. 18 3
698 8.53 temperature 15.0 4320 > th dose independent rect. 2 5
727 8.53 temperature 15.0 4320 < th dose independent rect. 1 12
730 8.53 temperature 15.0 4320 < th dose independent rect. 18 12
739 8.53 temperature 15.0 4320 < th dose independent rect. 16 13
744 8.53 temperature 15.0 4320 > th dose independent rect. 15 14
758 8.53 temperature 15.0 4320 < th dose independent rect. 1 15
854 8.53 temperature 15.0 4320 > th dose independent rect. 19 22
893 8.53 humidity 70.0 43200 < th dose dependent rect. 1 1
916 8.54 temperature 15.0 4320 > th dose independent sin 7 NA
934 8.54 temperature 15.0 4320 < th dose independent rect. 23 1
938 8.54 temperature 15.0 4320 < th dose independent rect. 2 2
991 8.54 temperature 15.0 4320 < th dose independent rect. 20 10