Os01g0511600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0511600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.74 | 0.51 | 13.7 | -2.02 | 1.73 | -0.58 | 0.211 | -0.0264 | -1.06 | 22.7 | 20.8 | 835 | -- | -- |
| 117.74 | 0.505 | 13.7 | -2.01 | 1.73 | -0.578 | 0.203 | -- | -1.06 | 22.7 | 20.82 | 839 | -- | -- |
| 117.91 | 0.506 | 13.7 | -2.02 | 1.72 | -0.58 | -- | 0.0113 | -1.06 | 22.7 | 20.8 | 845 | -- | -- |
| 117.91 | 0.506 | 13.7 | -2.03 | 1.72 | -0.579 | -- | -- | -1.06 | 22.7 | 20.9 | 836 | -- | -- |
| 276.11 | 0.778 | 13.6 | -2.16 | -- | -0.562 | -- | -0.334 | -1.09 | -- | 20.8 | 845 | -- | -- |
| 127.65 | 0.53 | 13.7 | -2.23 | 1.63 | -- | 0.243 | -- | -1.2 | 22.7 | -- | -- | -- | -- |
| 127.9 | 0.53 | 13.7 | -2.24 | 1.63 | -- | -- | -- | -1.2 | 22.7 | -- | -- | -- | -- |
| 275.95 | 0.777 | 13.6 | -2.08 | -- | -0.562 | -- | -- | -1.07 | -- | 20.9 | 836 | -- | -- |
| 141.75 | 0.555 | 13.6 | -- | 1.71 | -1.7 | -- | -- | -0.57 | 22.8 | 18 | 47520 | -- | -- |
| 292.43 | 0.799 | 13.6 | -2.21 | -- | -- | -- | -- | -1.19 | -- | -- | -- | -- | -- |
| 260.3 | 0.755 | 13.6 | -- | 1.62 | -- | -- | -- | -0.948 | 22.6 | -- | -- | -- | -- |
| 308.78 | 0.818 | 13.5 | -- | -- | -1.78 | -- | -- | -0.592 | -- | 16.85 | 47520 | -- | -- |
| 421.16 | 0.958 | 13.6 | -- | -- | -- | -- | -- | -0.943 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 102.88 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 6 |
| 6 | 104.45 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 3 |
| 78 | 109.79 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 4 |
| 81 | 109.88 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 100 | 110.30 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 6 |
| 105 | 110.46 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 135 | 111.06 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 12 |
| 193 | 111.83 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 2 | 9 |
| 219 | 112.09 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 10 |
| 220 | 112.09 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 12 |
| 233 | 112.21 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 14 |
| 247 | 112.35 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 4 |
| 272 | 112.61 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 284 | 112.75 | temperature | 15.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 296 | 112.83 | temperature | 20.0 | 720 | > th | dose independent | sin | 8 | NA |
| 326 | 113.06 | temperature | 25.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 340 | 113.19 | temperature | 20.0 | 720 | < th | dose independent | sin | 6 | NA |
| 341 | 113.19 | temperature | 25.0 | 10 | > th | dose independent | rect. | 4 | 7 |
| 348 | 113.22 | temperature | 10.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 353 | 113.27 | radiation | 10.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 398 | 113.54 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 403 | 113.59 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 427 | 113.68 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 435 | 113.70 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 459 | 113.82 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 506 | 114.09 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 513 | 114.12 | radiation | 10.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 565 | 114.40 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 582 | 114.45 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 2 |
| 584 | 114.46 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 585 | 114.46 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 9 |
| 591 | 114.48 | radiation | 30.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 608 | 114.55 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 18 |
| 609 | 114.56 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 11 |
| 610 | 114.56 | humidity | 70.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 638 | 114.66 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 12 |
| 639 | 114.66 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 12 |
| 658 | 114.75 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 8 |
| 698 | 114.89 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 707 | 114.94 | radiation | 10.0 | 720 | < th | dose independent | rect. | 3 | 4 |
| 716 | 114.97 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 727 | 115.01 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 732 | 115.04 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 795 | 115.30 | radiation | 10.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 817 | 115.39 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 822 | 115.42 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 6 | 2 |
| 831 | 115.47 | radiation | 20.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 858 | 115.57 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 859 | 115.57 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 860 | 115.57 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 861 | 115.57 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 862 | 115.57 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 12 |
| 863 | 115.57 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 12 |
| 875 | 115.61 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 3 | 4 |
| 879 | 115.62 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 4 |
| 890 | 115.65 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 20 |
| 893 | 115.65 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 20 |
| 915 | 115.72 | wind | 1.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 917 | 115.72 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 933 | 115.77 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 954 | 115.85 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 12 |
| 957 | 115.86 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 976 | 115.90 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 20 |
| 992 | 115.95 | radiation | 10.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 994 | 115.95 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 11 |