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Os01g0511300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Proteasome component region PCI domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0148) R2 : 0.00054
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0155 (0.0312) R2dN8 : 0.000697 R2N8 : 0.00054
σ : 0.279
deviance : 35.67
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
24.39 0.232 11.2 0.0112 0.0932 -1.73 -0.151 8.44 0.0943 9.74 1000 279 -- --
25.64 0.238 11.1 0.544 0.074 -0.185 -0.272 -- 0.0902 8.42 1000 279 -- --
24.43 0.23 11.2 -0.00619 0.107 -1.73 -- 8.53 0.0966 10.5 1000 272 -- --
25.45 0.235 11.1 0.548 0.092 -0.216 -- -- 0.0994 10.5 1000 393 -- --
24.98 0.233 11.2 -0.0109 -- -1.73 -- 8.5 0.0934 -- 1000 269 -- --
26.58 0.242 11.1 0.577 0.0784 -- -0.239 -- 0.0781 8.76 -- -- -- --
26.66 0.242 11.1 0.571 0.0867 -- -- -- 0.0792 10.8 -- -- -- --
25.91 0.237 11.1 0.531 -- -0.226 -- -- 0.0927 -- 1000 277 -- --
32.7 0.266 11.1 -- 0.0886 -0.317 -- -- 0.0442 10.4 1000 279 -- --
27.12 0.243 11.1 0.569 -- -- -- -- 0.0786 -- -- -- -- --
35.25 0.278 11.1 -- 0.0829 -- -- -- 0.0156 10.3 -- -- -- --
33.14 0.268 11.1 -- -- -0.32 -- -- 0.0416 -- 1000 271 -- --
35.67 0.279 11.1 -- -- -- -- -- 0.0155 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.44 temperature 15 720 > th dose dependent rect. 12 3
2 23.57 atmosphere 1010 90 < th dose dependent rect. 19 14
4 23.67 temperature 10 720 > th dose dependent rect. 10 6
10 23.76 temperature 15 720 > th dose dependent rect. 12 1
12 23.77 atmosphere 1010 30 < th dose dependent rect. 19 16
20 23.80 atmosphere 995 270 > th dose dependent rect. 15 13
31 23.89 temperature 15 720 > th dose independent rect. 18 6
43 24.04 atmosphere 1010 10 < th dose dependent sin 11 NA
45 24.06 temperature 15 270 > th dose independent rect. 19 12
50 24.08 atmosphere 1015 720 < th dose dependent rect. 19 5
72 24.14 temperature 15 30 > th dose dependent rect. 12 14
73 24.15 temperature 15 30 > th dose independent rect. 12 14
95 24.17 atmosphere 1010 10 < th dose dependent rect. 14 21
98 24.19 humidity 90 720 < th dose independent rect. 10 6
124 24.23 temperature 25 720 < th dose dependent rect. 12 7
136 24.24 atmosphere 1010 10 < th dose dependent rect. 12 23
138 24.25 temperature 15 720 > th dose independent rect. 12 10
139 24.25 atmosphere 1000 270 > th dose independent rect. 13 23
145 24.26 atmosphere 995 10 > th dose dependent sin 10 NA
146 24.26 humidity 90 720 > th dose dependent rect. 14 3
147 24.26 temperature 15 30 > th dose dependent rect. 12 12
160 24.28 temperature 15 720 > th dose independent rect. 12 12
171 24.29 humidity 90 720 > th dose dependent rect. 12 5
183 24.31 atmosphere 995 720 > th dose dependent rect. 16 10
197 24.32 atmosphere 1000 10 > th dose dependent rect. 17 14
206 24.33 temperature 10 720 > th dose dependent rect. 12 10
213 24.34 temperature 15 1440 > th dose independent rect. 6 12
217 24.34 temperature 10 270 > th dose dependent rect. 10 13
220 24.35 atmosphere 1000 270 > th dose independent sin 14 NA
225 24.35 temperature 30 720 < th dose dependent rect. 9 10
230 24.36 humidity 90 720 > th dose independent rect. 12 6
232 24.36 atmosphere 1000 270 < th dose independent rect. 12 21
234 24.36 humidity 90 720 > th dose dependent rect. 15 1
239 24.37 temperature 30 720 < th dose independent rect. 16 1
244 24.37 temperature 30 720 < th dose dependent rect. 15 3
275 24.40 atmosphere 1005 720 > th dose independent rect. 15 10
287 24.41 temperature 15 1440 > th dose independent rect. 13 1
296 24.41 temperature 25 4320 > th dose dependent rect. 24 1
305 24.42 humidity 90 720 > th dose independent rect. 14 4
313 24.42 atmosphere 995 720 > th dose dependent rect. 16 3
328 24.43 atmosphere 1000 270 > th dose independent no NA NA
338 24.43 atmosphere 1010 720 < th dose dependent rect. 13 11
351 24.44 temperature 25 4320 > th dose independent rect. 24 3
382 24.45 temperature 30 720 > th dose independent rect. 12 5
383 24.45 atmosphere 1005 270 > th dose independent rect. 15 16
387 24.45 atmosphere 1000 270 < th dose independent rect. 5 23
409 24.46 atmosphere 1000 270 < th dose independent no NA NA
411 24.46 atmosphere 1005 720 > th dose independent rect. 16 3
417 24.46 temperature 15 10 > th dose independent rect. 19 23
418 24.46 atmosphere 1000 270 < th dose independent rect. 2 23
432 24.47 temperature 30 720 > th dose independent rect. 12 3
433 24.47 temperature 15 1440 > th dose independent rect. 13 5
445 24.47 humidity 90 720 < th dose dependent rect. 12 1
461 24.48 temperature 15 720 > th dose independent rect. 14 10
462 24.48 temperature 30 720 < th dose independent rect. 7 11
468 24.48 atmosphere 1000 270 < th dose independent rect. 20 23
469 24.48 atmosphere 1000 270 < th dose independent rect. 23 23
485 24.48 temperature 10 720 > th dose dependent rect. 4 18
490 24.49 atmosphere 1005 30 > th dose independent rect. 17 17
491 24.49 temperature 30 720 < th dose independent rect. 24 18
566 24.52 temperature 30 720 > th dose independent rect. 12 1
587 24.52 atmosphere 1010 90 < th dose dependent rect. 23 10
588 24.52 temperature 10 720 > th dose dependent rect. 4 12
641 24.54 temperature 15 1440 > th dose independent rect. 4 14
670 24.54 temperature 10 30 > th dose dependent rect. 19 23
672 24.55 temperature 15 1440 > th dose independent sin 20 NA
699 24.55 atmosphere 1000 10 > th dose dependent rect. 17 17
704 24.56 temperature 25 270 > th dose independent rect. 19 1
709 24.56 temperature 30 720 < th dose independent rect. 11 7
711 24.56 temperature 15 1440 > th dose independent rect. 8 10
712 24.56 temperature 15 1440 > th dose independent rect. 6 19
768 24.57 temperature 25 10 > th dose dependent rect. 12 23
781 24.58 temperature 15 30 > th dose independent rect. 3 23
782 24.58 temperature 10 720 > th dose dependent sin 23 NA
793 24.58 atmosphere 1015 30 < th dose dependent rect. 12 14
822 24.59 temperature 25 4320 > th dose dependent rect. 23 8
841 24.60 temperature 15 30 > th dose independent sin 7 NA
844 24.60 temperature 15 270 > th dose independent sin 8 NA
876 24.60 temperature 15 270 > th dose independent sin 20 NA
885 24.60 temperature 15 10 > th dose independent sin 1 NA
898 24.60 atmosphere 1000 270 < th dose independent sin 16 NA
903 24.60 atmosphere 1005 30 > th dose independent rect. 17 14
907 24.60 temperature 30 720 < th dose dependent sin 21 NA
909 24.60 radiation 1 720 > th dose dependent rect. 12 1
946 24.61 temperature 15 720 > th dose independent rect. 7 16
980 24.62 temperature 25 4320 < th dose independent rect. 1 1